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Hello all, |
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|
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"emerge blas-atlas" apparently wants to install stuff into /etc instead of |
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$EPREFIX/etc |
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|
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Anybody knows how to fix this? |
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|
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Here are my symptons: |
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|
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Output of |
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>emerge blas-atlas |
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... |
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>>> Completed installing blas-atlas-3.9.3 into |
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>>> /local/aamann/gentoo-prefix/var/tmp/portage/sci-libs/blas-atlas-3.9.3/image/local/aamann/gentoo-prefix/ |
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|
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strip: x86_64-pc-linux-gnu-strip --strip-unneeded -R .comment |
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usr/lib/libatlas.so.0.0.0 |
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usr/lib/blas/threaded-atlas/libblas.so.0.0.0 |
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usr/lib/blas/threaded-atlas/libcblas.so.0.0.0 |
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usr/lib/blas/atlas/libblas.so.0.0.0 |
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usr/lib/blas/atlas/libcblas.so.0.0.0 |
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usr/lib/blas/threaded-atlas/libcblas.a |
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usr/lib/blas/threaded-atlas/libblas.a |
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usr/lib/blas/atlas/libcblas.a |
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usr/lib/blas/atlas/libblas.a |
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usr/lib/libatlas.a |
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* QA Notice: the following files are outside of the prefix: |
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* /etc |
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* /etc/env.d |
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* /etc/env.d/cblas |
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* /etc/env.d/cblas/lib |
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* /etc/env.d/cblas/lib/atlas-threads |
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* /etc/env.d/cblas/lib/atlas |
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* /etc/env.d/blas |
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* /etc/env.d/blas/lib |
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* /etc/env.d/blas/lib/atlas-threads |
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* /etc/env.d/blas/lib/atlas |
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* ERROR: sci-libs/blas-atlas-3.9.3 failed: |
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* Aborting due to QA concerns: there are files installed outside the |
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prefix |
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* |
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* Call stack: |
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* misc-functions.sh, line 1410: Called install_qa_check |
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* misc-functions.sh, line 89: Called install_qa_check_prefix |
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* misc-functions.sh, line 589: Called die |
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* The specific snippet of code: |
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* die "Aborting due to QA concerns: there are files |
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installed outside the prefix" |
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* |
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|
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Here the output of |
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>emerge -pqv =sci-libs/blas-atlas-3.9.3 |
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[ebuild N ] sci-libs/blas-atlas-3.9.3 USE="-debug -doc" |
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|
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and the output of |
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>emerge --info =sci-libs/blas-atlas-3.9.3 |
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Portage 2.2.00.14813-prefix (prefix/linux/amd64, gcc-4.2.4, unavailable, |
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2.6.24.4-64.fc8 x86_64) |
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================================================================= |
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System Settings |
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================================================================= |
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System uname: |
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Linux-2.6.24.4-64.fc8-x86_64-AMD_Athlon-tm-_64_X2_Dual_Core_Processor_4200+-with-fedora-8-Werewolf |
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Timestamp of tree: Tue, 24 Nov 2009 14:02:19 +0000 |
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app-shells/bash: 4.0_p35 |
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dev-java/java-config: 1.3.7-r1, 2.1.7 |
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dev-lang/python: 2.5.4-r2, 2.6.2-r2 |
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dev-util/cmake: 2.6.2-r1 |
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sys-apps/sandbox: 2.0 |
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sys-devel/autoconf: 2.63-r01.1 |
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sys-devel/automake: 1.9.6-r2, 1.10.2-r00.1, 1.11 |
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sys-devel/binutils: 2.19.51.0.1 |
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sys-devel/gcc-config: 1.4.0-r04.6 |
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sys-devel/libtool: 2.2.6a-r00.2 |
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virtual/os-headers: 2.6.30-r1 |
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ACCEPT_KEYWORDS="~amd64-linux" |
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CBUILD="x86_64-pc-linux-gnu" |
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CFLAGS="-O2 -pipe" |
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CHOST="x86_64-pc-linux-gnu" |
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CONFIG_PROTECT="/etc" |
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CONFIG_PROTECT_MASK="/etc/ca-certificates.conf /etc/env.d /etc/env.d/java/ |
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/etc/fonts/fonts.conf /etc/gconf /etc/sandbox.d /etc/terminfo" |
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CXXFLAGS="-O2 -pipe" |
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DISTDIR="/local/aamann/gentoo-prefix/usr/portage/distfiles" |
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FEATURES="assume-digests collision-protect distlocks fixpackages news |
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parallel-fetch preserve-libs protect-owned sfperms strict unmerge-logs |
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unmerge-orphans userfetch" |
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GENTOO_MIRRORS="http://distfiles.gentoo.org |
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http://distro.ibiblio.org/pub/linux/distributions/gentoo" |
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LANG="en_IE.UTF-8" |
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LDFLAGS="-Wl,-O1" |
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PKGDIR="/local/aamann/gentoo-prefix/usr/portage/packages" |
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PORTAGE_CONFIGROOT="/local/aamann/gentoo-prefix/" |
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PORTAGE_RSYNC_OPTS="--recursive --links --safe-links --perms --times |
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--compress --force --whole-file --delete --stats --timeout=180 |
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--exclude=/distfiles --exclude=/local --exclude=/packages" |
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PORTAGE_TMPDIR="/local/aamann/gentoo-prefix/var/tmp" |
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PORTDIR="/local/aamann/gentoo-prefix/usr/portage" |
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SYNC="rsync://rsync.prefix.freens.org/gentoo-portage-prefix" |
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USE="X amd64 berkdb bzip2 cairo cli cracklib crypt cxx dri fftw fortran gdbm |
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iconv ipv6 latex mmx modules mudflap ncurses nls nptl nptlonly openmp pcre |
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pdf perl pppd prefix python readline reflection session spl sse sse2 ssl |
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sysfs tcpd unicode xorg zlib" ALSA_CARDS="ali5451 als4000 atiixp |
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atiixp-modem bt87x ca0106 cmipci emu10k1x ens1370 ens1371 es1938 es1968 |
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fm801 hda-intel intel8x0 intel8x0m maestro3 trident usb-audio via82xx |
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via82xx-modem ymfpci" ALSA_PCM_PLUGINS="adpcm alaw asym copy dmix dshare |
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dsnoop empty extplug file hooks iec958 ioplug ladspa lfloat linear meter |
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mmap_emul mulaw multi null plug rate route share shm softvol" |
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APACHE2_MODULES="actions alias auth_basic authn_alias authn_anon authn_dbm |
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authn_default authn_file authz_dbm authz_default authz_groupfile authz_host |
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authz_owner authz_user autoindex cache dav dav_fs dav_lock deflate dir |
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disk_cache env expires ext_filter file_cache filter headers include info |
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log_config logio mem_cache mime mime_magic negotiation rewrite setenvif |
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speling status unique_id userdir usertrack vhost_alias" ELIBC="glibc" |
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INPUT_DEVICES="keyboard mouse evdev" KERNEL="linux" LCD_DEVICES="bayrad |
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cfontz cfontz633 glk hd44780 lb216 lcdm001 mtxorb ncurses text" |
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USERLAND="GNU" VIDEO_CARDS="fbdev glint intel mach64 mga neomagic nv r128 |
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radeon savage sis tdfx trident vesa vga via vmware voodoo" |
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Unset: CPPFLAGS, CTARGET, EMERGE_DEFAULT_OPTS, FFLAGS, INSTALL_MASK, |
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LC_ALL, LINGUAS, MAKEOPTS, PORTAGE_COMPRESS, PORTAGE_COMPRESS_FLAGS, |
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PORTAGE_RSYNC_EXTRA_OPTS, PORTDIR_OVERLAY |
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