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commit: ee649bc48962c51c37ae92acdd85e65f480e48bf |
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Author: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Fri Mar 30 23:13:32 2018 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Fri Mar 30 23:13:32 2018 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=ee649bc4 |
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|
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sci-biology/bamql: new package |
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|
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Package-Manager: Portage-2.3.24, Repoman-2.3.6 |
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|
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sci-biology/bamql/bamql-1.5.ebuild | 28 ++++++++++++++++++++++++++++ |
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sci-biology/bamql/metadata.xml | 12 ++++++++++++ |
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2 files changed, 40 insertions(+) |
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|
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diff --git a/sci-biology/bamql/bamql-1.5.ebuild b/sci-biology/bamql/bamql-1.5.ebuild |
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new file mode 100644 |
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index 000000000..ef78e3753 |
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--- /dev/null |
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+++ b/sci-biology/bamql/bamql-1.5.ebuild |
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@@ -0,0 +1,28 @@ |
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+# Copyright 1999-2018 Gentoo Foundation |
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+# Distributed under the terms of the GNU General Public License v2 |
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+ |
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+EAPI=6 |
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+ |
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+inherit autotools |
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+ |
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+DESCRIPTION="Extract reads from BAM files" |
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+HOMEPAGE="https://github.com/BoutrosLaboratory/bamql |
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+ https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-016-1162-y" |
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+SRC_URI="https://github.com/BoutrosLaboratory/bamql/archive/v1.5.tar.gz -> ${P}.tar.gz" |
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+ |
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+LICENSE="MIT" |
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+SLOT="0" |
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+KEYWORDS="~amd64 ~x86" |
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+IUSE="" |
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+ |
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+DEPEND=" |
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+ sys-devel/llvm:= |
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+ sys-apps/util-linux |
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+ sci-libs/htslib |
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+ dev-libs/libpcre" |
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+RDEPEND="${DEPEND}" |
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+ |
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+src_prepare(){ |
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+ eautoreconf |
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+ default |
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+} |
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|
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diff --git a/sci-biology/bamql/metadata.xml b/sci-biology/bamql/metadata.xml |
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new file mode 100644 |
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index 000000000..138cb7705 |
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--- /dev/null |
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+++ b/sci-biology/bamql/metadata.xml |
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@@ -0,0 +1,12 @@ |
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+<?xml version="1.0" encoding="UTF-8"?> |
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+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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+<pkgmetadata> |
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+ <maintainer type="person"> |
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+ <email>mmokrejs@×××××××××××××××.cz</email> |
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+ <name>Martin Mokrejs</name> |
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+ </maintainer> |
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+ <maintainer type="project"> |
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+ <email>sci-biology@g.o</email> |
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+ <name>Gentoo Biology Project</name> |
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+ </maintainer> |
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+</pkgmetadata> |
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