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commit: cca8132f7c8070e2d6c06e0efbe01a1860a92fba |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Fri May 1 22:40:41 2015 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Fri May 1 22:40:41 2015 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=cca8132f |
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|
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sci-biology/hexamer: new package |
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|
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Package-Manager: portage-2.2.18 |
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|
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sci-biology/hexamer/ChangeLog | 9 +++++++++ |
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sci-biology/hexamer/hexamer-19990330.ebuild | 30 +++++++++++++++++++++++++++++ |
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sci-biology/hexamer/metadata.xml | 9 +++++++++ |
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3 files changed, 48 insertions(+) |
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|
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diff --git a/sci-biology/hexamer/ChangeLog b/sci-biology/hexamer/ChangeLog |
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new file mode 100644 |
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index 0000000..7a2252f |
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--- /dev/null |
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+++ b/sci-biology/hexamer/ChangeLog |
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@@ -0,0 +1,9 @@ |
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+# ChangeLog for sci-biology/hexamer |
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+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 |
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+# $Header: $ |
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+ |
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+*hexamer-19990330 (01 May 2015) |
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+ |
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+ 01 May 2015; Martin Mokrejs <mmokrejs@×××××××××××××××.cz> |
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+ +hexamer-19990330.ebuild, +metadata.xml: |
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+ sci-biology/hexamer: new package |
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|
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diff --git a/sci-biology/hexamer/hexamer-19990330.ebuild b/sci-biology/hexamer/hexamer-19990330.ebuild |
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new file mode 100644 |
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index 0000000..fda4818 |
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--- /dev/null |
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+++ b/sci-biology/hexamer/hexamer-19990330.ebuild |
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@@ -0,0 +1,30 @@ |
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+# Copyright 1999-2015 Gentoo Foundation |
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+# Distributed under the terms of the GNU General Public License v2 |
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+# $Header: $ |
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+ |
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+EAPI=5 |
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+ |
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+inherit toolchain-funcs |
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+ |
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+DESCRIPTION="Predict CDS using 6mers without deriving information from base composition" |
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+HOMEPAGE="http://www.sanger.ac.uk/resources/software" |
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+SRC_URI="ftp://ftp.sanger.ac.uk/pub/users/rd/hexamer.tar.gz -> hexamer-19990330.tar.gz" |
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+ |
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+LICENSE="all-rights-reserved" |
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+SLOT="0" |
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+KEYWORDS="~amd64" |
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+IUSE="" |
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+ |
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+DEPEND="" |
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+RDEPEND="${DEPEND}" |
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+ |
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+S="${WORKDIR}"/hexamer |
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+ |
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+src_prepare(){ |
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+ sed -e "s#cc -g#$(tc-getCC) ${CFLAGS}#" -i Makefile || die |
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+} |
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+ |
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+src_install(){ |
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+ dobin hexamer hextable |
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+ dodoc README |
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+} |
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|
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diff --git a/sci-biology/hexamer/metadata.xml b/sci-biology/hexamer/metadata.xml |
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new file mode 100644 |
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index 0000000..2bc8930 |
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--- /dev/null |
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+++ b/sci-biology/hexamer/metadata.xml |
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@@ -0,0 +1,9 @@ |
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+<?xml version="1.0" encoding="UTF-8"?> |
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+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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+<pkgmetadata> |
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+ <herd>sci-biology</herd> |
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+ <maintainer> |
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+ <email>mmokrejs@×××××××××××××××.cz</email> |
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+ <name>Martin Mokrejs</name> |
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+ </maintainer> |
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+</pkgmetadata> |