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commit: 5b84166e0195cbf63e9954986da0798f35ad0aee |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Thu Apr 30 22:45:08 2015 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Thu Apr 30 22:45:08 2015 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=5b84166e |
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|
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sci-biology/trinityrnaseq: added a note and removed broken symlink upon installation |
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|
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Package-Manager: portage-2.2.18 |
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|
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sci-biology/trinityrnaseq/ChangeLog | 5 +++++ |
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sci-biology/trinityrnaseq/trinityrnaseq-2.0.6.ebuild | 3 +++ |
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2 files changed, 8 insertions(+) |
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|
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diff --git a/sci-biology/trinityrnaseq/ChangeLog b/sci-biology/trinityrnaseq/ChangeLog |
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index a630ba3..7a31500 100644 |
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--- a/sci-biology/trinityrnaseq/ChangeLog |
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+++ b/sci-biology/trinityrnaseq/ChangeLog |
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@@ -2,6 +2,11 @@ |
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# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 |
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# $Header: $ |
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|
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+ 30 Apr 2015; Martin Mokrejs <mmokrejs@×××××××××××××××.cz> |
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+ trinityrnaseq-2.0.6.ebuild: |
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+ sci-biology/trinityrnaseq: added a note and removed broken symlink upon |
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+ installation |
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+ |
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*trinityrnaseq-2.0.6 (30 Apr 2015) |
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|
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30 Apr 2015; Martin Mokrejs <mmokrejs@×××××××××××××××.cz> |
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|
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diff --git a/sci-biology/trinityrnaseq/trinityrnaseq-2.0.6.ebuild b/sci-biology/trinityrnaseq/trinityrnaseq-2.0.6.ebuild |
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index 335d075..2ec2290 100644 |
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--- a/sci-biology/trinityrnaseq/trinityrnaseq-2.0.6.ebuild |
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+++ b/sci-biology/trinityrnaseq/trinityrnaseq-2.0.6.ebuild |
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@@ -28,6 +28,8 @@ RDEPEND="${DEPEND} |
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# ReleaseNotes mentions that <sci-biology/samtools-1.1 is needed |
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# version of bundled jellyfish is 2.1.4 |
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|
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+# optionally install https://github.com/HpcGridRunner/HpcGridRunner/releases |
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+ |
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#src_compile(){ |
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# emake all |
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# emake plugins # bundled copies of TransDecoder, trimmomatic, fastool, parafly |
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@@ -41,6 +43,7 @@ src_install(){ |
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dodoc trinity-plugins/fstrozzi-Fastool-7c3e034f05/README.md |
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# |
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insinto /usr/share/${PN}/util |
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+ rm -f util/fasta_tool |
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doins -r util/* |
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# |
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dobin Inchworm/bin/* |
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