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jlec 10/04/26 20:28:08 |
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|
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Modified: ChangeLog |
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Added: apbs-1.2.1b-r3.ebuild |
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Removed: apbs-1.2.1b-r2.ebuild |
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Log: |
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Wrong usage of python_get_sitedir forced revbump, thanks arfrever for watching |
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(Portage version: 2.2_rc67/cvs/Linux x86_64) |
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|
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Revision Changes Path |
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1.29 sci-chemistry/apbs/ChangeLog |
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|
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file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.29&view=markup |
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plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/ChangeLog?rev=1.29&content-type=text/plain |
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diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/ChangeLog?r1=1.28&r2=1.29 |
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|
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Index: ChangeLog |
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=================================================================== |
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RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v |
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retrieving revision 1.28 |
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retrieving revision 1.29 |
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diff -u -r1.28 -r1.29 |
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--- ChangeLog 25 Apr 2010 09:24:23 -0000 1.28 |
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+++ ChangeLog 26 Apr 2010 20:28:08 -0000 1.29 |
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@@ -1,6 +1,12 @@ |
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# ChangeLog for sci-chemistry/apbs |
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# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 |
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-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.28 2010/04/25 09:24:23 jlec Exp $ |
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+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/ChangeLog,v 1.29 2010/04/26 20:28:08 jlec Exp $ |
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+ |
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+*apbs-1.2.1b-r3 (26 Apr 2010) |
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+ |
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+ 26 Apr 2010; Justin Lecher <jlec@g.o> -apbs-1.2.1b-r2.ebuild, |
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+ +apbs-1.2.1b-r3.ebuild: |
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+ Wrong usage of python_get_sitedir forces the rev bump |
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|
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25 Apr 2010; Justin Lecher <jlec@g.o> apbs-1.2.1b-r2.ebuild: |
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Python ABI fixes, #316165 |
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|
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|
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|
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1.1 sci-chemistry/apbs/apbs-1.2.1b-r3.ebuild |
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|
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file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r3.ebuild?rev=1.1&view=markup |
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plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r3.ebuild?rev=1.1&content-type=text/plain |
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|
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Index: apbs-1.2.1b-r3.ebuild |
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=================================================================== |
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# Copyright 1999-2010 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/apbs/apbs-1.2.1b-r3.ebuild,v 1.1 2010/04/26 20:28:08 jlec Exp $ |
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|
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EAPI="3" |
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|
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PYTHON_DEPEND="python? 2" |
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FORTRAN="g77 gfortran ifc" |
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|
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inherit autotools eutils flag-o-matic fortran python versionator |
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|
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MY_PV=$(get_version_component_range 1-3) |
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MY_P="${PN}-${MY_PV}" |
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|
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DESCRIPTION="Software for evaluating the electrostatic properties of nanoscale biomolecular systems" |
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HOMEPAGE="http://apbs.sourceforge.net/" |
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SRC_URI="mirror://sourceforge/${PN}/${P}-source.tar.gz" |
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|
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SLOT="0" |
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LICENSE="BSD" |
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IUSE="arpack blas doc mpi openmp python tools" |
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KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" |
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|
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DEPEND=" |
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dev-libs/maloc[mpi=] |
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blas? ( virtual/blas ) |
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sys-libs/readline |
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arpack? ( sci-libs/arpack ) |
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mpi? ( virtual/mpi )" |
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RDEPEND="${DEPEND}" |
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|
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S="${WORKDIR}"/"${MY_P}-source" |
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|
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pkg_setup() { |
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use python && python_set_active_version 2 |
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} |
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|
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src_prepare() { |
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epatch "${FILESDIR}"/${P}-openmp.patch |
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epatch "${FILESDIR}"/${P}-install-fix.patch |
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epatch "${FILESDIR}"/${PN}-1.2.0-contrib.patch |
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epatch "${FILESDIR}"/${PN}-1.2.0-link.patch |
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epatch "${FILESDIR}"/${P}-autoconf-2.64.patch |
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sed "s:GENTOO_PKG_NAME:${PN}:g" \ |
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-i Makefile.am || die "Cannot correct package name" |
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eautoreconf |
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find . -name "._*" -exec rm -f '{}' \; |
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} |
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|
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src_configure() { |
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local myconf="--docdir=${EPREFIX}/usr/share/doc/${PF}" |
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use blas && myconf="${myconf} --with-blas=-lblas" |
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use arpack && myconf="${myconf} --with-arpack=${EPREFIX}/usr/$(get_libdir)" |
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|
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# check which mpi version is installed and tell configure |
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if use mpi; then |
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export CC="${EPREFIX}/usr/bin/mpicc" |
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export F77="${EPREFIX}/usr/bin/mpif77" |
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|
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if has_version sys-cluster/mpich; then |
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myconf="${myconf} --with-mpich=${EPREFIX}/usr" |
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elif has_version sys-cluster/mpich2; then |
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myconf="${myconf} --with-mpich2=${EPREFIX}/usr" |
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elif has_version sys-cluster/lam-mpi; then |
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myconf="${myconf} --with-lam=${EPREFIX}/usr" |
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elif has_version sys-cluster/openmpi; then |
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myconf="${myconf} --with-openmpi=${EPREFIX}/usr" |
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fi |
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fi || die "Failed to select proper mpi implementation" |
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|
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# we need the tools target for python |
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if use python && ! use tools; then |
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myconf="${myconf} --enable-tools" |
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fi |
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|
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econf \ |
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--disable-maloc-rebuild \ |
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$(use_enable openmp) \ |
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$(use_enable python) \ |
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$(use_enable tools) \ |
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${myconf} |
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} |
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|
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src_compile() { |
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emake -j1 || die "make failed" |
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} |
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|
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src_test() { |
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cd examples && make test \ |
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|| die "Tests failed" |
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} |
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|
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src_install() { |
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emake -j1 DESTDIR="${D}" install \ |
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|| die "make install failed" |
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|
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if use tools; then |
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mv tools/mesh/{,mesh-}analysis || die |
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dobin tools/mesh/* || die |
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|
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if use arpack; then |
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dobin tools/arpack/* || die |
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fi |
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|
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insinto /usr/share/${PN} |
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doins -r tools/conversion || die |
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doins -r tools/visualization/opendx || die |
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|
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dobin tools/manip/{born,coulomb} || die |
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|
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doins -r tools/matlab || die |
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fi |
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|
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insinto $(python_get_sitedir)/${PN} |
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doins tools/manip/*.py || die |
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|
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if use python && ! use mpi; then |
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insinto $(python_get_sitedir)/${PN} |
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doins tools/python/{*.py,*.pqr,*.so} || die |
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doins tools/python/*/{*.py,*.so} || die |
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fi |
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|
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dodoc AUTHORS INSTALL README NEWS ChangeLog \ |
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|| die "Failed to install docs" |
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|
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if use doc; then |
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dohtml -r doc/* || die "Failed to install html docs" |
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fi |
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} |
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|
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pkg_postinst() { |
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python_mod_optimize ${PN} |
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} |
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|
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pkg_postrm() { |
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python_mod_cleanup ${PN} |
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} |