1 |
commit: df3b9cb9a21f4e45de635f25cfec8b7c0ee42e74 |
2 |
Author: Matthias Maier <tamiko <AT> gentoo <DOT> org> |
3 |
AuthorDate: Fri Aug 31 03:24:28 2018 +0000 |
4 |
Commit: Matthias Maier <tamiko <AT> gentoo <DOT> org> |
5 |
CommitDate: Fri Aug 31 03:24:28 2018 +0000 |
6 |
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=df3b9cb9 |
7 |
|
8 |
sci-mathematics/petsc: drop old |
9 |
|
10 |
Package-Manager: Portage-2.3.48, Repoman-2.3.10 |
11 |
|
12 |
sci-mathematics/petsc/petsc-3.9.0-r1.ebuild | 196 ---------------------------- |
13 |
1 file changed, 196 deletions(-) |
14 |
|
15 |
diff --git a/sci-mathematics/petsc/petsc-3.9.0-r1.ebuild b/sci-mathematics/petsc/petsc-3.9.0-r1.ebuild |
16 |
deleted file mode 100644 |
17 |
index 1755e242a..000000000 |
18 |
--- a/sci-mathematics/petsc/petsc-3.9.0-r1.ebuild |
19 |
+++ /dev/null |
20 |
@@ -1,196 +0,0 @@ |
21 |
-# Copyright 1999-2018 Gentoo Foundation |
22 |
-# Distributed under the terms of the GNU General Public License v2 |
23 |
- |
24 |
-EAPI=6 |
25 |
- |
26 |
-PYTHON_COMPAT=( python2_7 ) |
27 |
- |
28 |
-inherit eutils flag-o-matic fortran-2 python-any-r1 toolchain-funcs versionator |
29 |
- |
30 |
-MY_P="${PN}-$(replace_version_separator _ -)" |
31 |
- |
32 |
-DESCRIPTION="Portable, Extensible Toolkit for Scientific Computation" |
33 |
-HOMEPAGE="http://www.mcs.anl.gov/petsc/" |
34 |
-SRC_URI="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${MY_P}.tar.gz" |
35 |
- |
36 |
-LICENSE="BSD-2" |
37 |
-SLOT="0" |
38 |
-KEYWORDS="~x86 ~amd64" |
39 |
-IUSE="afterimage boost complex-scalars cxx debug doc fftw |
40 |
- fortran hdf5 hypre mpi metis mumps scotch sparse superlu threads X" |
41 |
- |
42 |
-# hypre and superlu curretly exclude each other due to missing linking to hypre |
43 |
-# if both are enabled |
44 |
-REQUIRED_USE=" |
45 |
- afterimage? ( X ) |
46 |
- complex-scalars? ( !hypre !superlu ) |
47 |
- hdf5? ( mpi ) |
48 |
- hypre? ( cxx mpi !superlu ) |
49 |
- mumps? ( mpi scotch ) |
50 |
- scotch? ( mpi ) |
51 |
- superlu? ( !hypre ) |
52 |
-" |
53 |
- |
54 |
-RDEPEND=" |
55 |
- virtual/blas |
56 |
- virtual/lapack |
57 |
- afterimage? ( media-libs/libafterimage ) |
58 |
- boost? ( dev-libs/boost ) |
59 |
- fftw? ( sci-libs/fftw:3.0[mpi?] ) |
60 |
- hdf5? ( sci-libs/hdf5[mpi?] ) |
61 |
- hypre? ( >=sci-libs/hypre-2.8.0b[mpi?] ) |
62 |
- metis? ( >=sci-libs/parmetis-4 ) |
63 |
- mpi? ( virtual/mpi[cxx?,fortran?] ) |
64 |
- mumps? ( sci-libs/mumps[mpi?] sci-libs/scalapack ) |
65 |
- scotch? ( sci-libs/scotch[mpi?] ) |
66 |
- sparse? ( sci-libs/suitesparse >=sci-libs/cholmod-1.7.0 ) |
67 |
- superlu? ( >=sci-libs/superlu-5 ) |
68 |
- X? ( x11-libs/libX11 ) |
69 |
-" |
70 |
- |
71 |
-DEPEND="${RDEPEND} |
72 |
- ${PYTHON_DEPS} |
73 |
- virtual/pkgconfig |
74 |
- dev-util/cmake |
75 |
-" |
76 |
- |
77 |
-S="${WORKDIR}/${MY_P}" |
78 |
- |
79 |
-PATCHES=( |
80 |
- "${FILESDIR}"/${PN}-3.7.0-disable-rpath.patch \ |
81 |
- "${FILESDIR}"/${PN}-3.9.0-fix_sandbox_violation.patch |
82 |
-) |
83 |
- |
84 |
-src_prepare() { |
85 |
- default |
86 |
- |
87 |
- sed -i -e 's%/usr/bin/env python%/usr/bin/env python2%' configure || die |
88 |
-} |
89 |
- |
90 |
-# petsc uses --with-blah=1 and --with-blah=0 to en/disable options |
91 |
-petsc_enable() { |
92 |
- use "$1" && echo "--with-${2:-$1}=1" || echo "--with-${2:-$1}=0" |
93 |
-} |
94 |
-# add external library: |
95 |
-# petsc_with use_flag libname libdir |
96 |
-# petsc_with use_flag libname include linking_libs |
97 |
-petsc_with() { |
98 |
- local myuse p=${2:-${1}} |
99 |
- if use ${1}; then |
100 |
- myuse="--with-${p}=1" |
101 |
- if [[ $# -ge 4 ]]; then |
102 |
- myuse="${myuse} --with-${p}-include=${EPREFIX}${3}" |
103 |
- shift 3 |
104 |
- myuse="${myuse} --with-${p}-lib=$@" |
105 |
- else |
106 |
- myuse="${myuse} --with-${p}-dir=${EPREFIX}${3:-/usr}" |
107 |
- fi |
108 |
- else |
109 |
- myuse="--with-${p}=0" |
110 |
- fi |
111 |
- echo ${myuse} |
112 |
-} |
113 |
- |
114 |
-# select between configure options depending on use flag |
115 |
-petsc_select() { |
116 |
- use "$1" && echo "--with-$2=$3" || echo "--with-$2=$4" |
117 |
-} |
118 |
- |
119 |
-src_configure() { |
120 |
- # bug 548498 |
121 |
- # PETSc runs mpi processes during configure that result in a sandbox |
122 |
- # violation by trying to open /proc/mtrr rw. This is not easy to |
123 |
- # mitigate because it happens in libpciaccess.so called by libhwloc.so, |
124 |
- # which is used by libmpi.so. |
125 |
- addpredict /proc/mtrr |
126 |
- # if mpi is built with knem support it needs /dev/knem too |
127 |
- addpredict /dev/knem |
128 |
- |
129 |
- # configureMPITypes with openmpi-2* insists on accessing the scaling |
130 |
- # governor rw. |
131 |
- addpredict /sys/devices/system/cpu/ |
132 |
- |
133 |
- local mylang |
134 |
- local myopt |
135 |
- |
136 |
- use cxx && mylang="cxx" || mylang="c" |
137 |
- use debug && myopt="debug" || myopt="opt" |
138 |
- |
139 |
- # environmental variables expected by petsc during build |
140 |
- |
141 |
- export PETSC_DIR="${S}" |
142 |
- export PETSC_ARCH="linux-gnu-${mylang}-${myopt}" |
143 |
- |
144 |
- if use debug; then |
145 |
- strip-flags |
146 |
- filter-flags -O* |
147 |
- fi |
148 |
- |
149 |
- # C Support on CXX builds is enabled if possible i.e. when not using |
150 |
- # complex scalars (no complex type for both available at the same time) |
151 |
- |
152 |
- econf \ |
153 |
- scrollOutput=1 \ |
154 |
- FFLAGS="${FFLAGS} -fPIC" \ |
155 |
- CFLAGS="${CFLAGS} -fPIC" \ |
156 |
- CXXFLAGS="${CXXFLAGS} -fPIC" \ |
157 |
- LDFLAGS="${LDFLAGS}" \ |
158 |
- --prefix="${EPREFIX}/usr/$(get_libdir)/petsc" \ |
159 |
- --with-shared-libraries \ |
160 |
- --with-single-library \ |
161 |
- --with-clanguage=${mylang} \ |
162 |
- $(use cxx && ! use complex-scalars && echo "with-c-support=1") \ |
163 |
- --with-petsc-arch=${PETSC_ARCH} \ |
164 |
- --with-precision=double \ |
165 |
- --with-gnu-compilers \ |
166 |
- --with-blas-lapack-lib="$($(tc-getPKG_CONFIG) --libs lapack)" \ |
167 |
- $(petsc_enable debug debugging) \ |
168 |
- $(petsc_enable mpi) \ |
169 |
- $(petsc_select mpi cc mpicc $(tc-getCC)) \ |
170 |
- $(petsc_select mpi cxx mpicxx $(tc-getCXX)) \ |
171 |
- $(petsc_enable fortran) \ |
172 |
- $(use fortran && echo "$(petsc_select mpi fc mpif77 $(tc-getF77))") \ |
173 |
- $(petsc_enable mpi mpi-compilers) \ |
174 |
- $(petsc_select complex-scalars scalar-type complex real) \ |
175 |
- --with-windows-graphics=0 \ |
176 |
- --with-matlab=0 \ |
177 |
- --with-cmake=cmake \ |
178 |
- $(petsc_enable threads pthread) \ |
179 |
- $(petsc_with afterimage afterimage \ |
180 |
- /usr/include/libAfterImage -lAfterImage) \ |
181 |
- $(petsc_with hdf5) \ |
182 |
- $(petsc_with hypre hypre \ |
183 |
- /usr/include/hypre -lHYPRE) \ |
184 |
- $(petsc_with sparse suitesparse) \ |
185 |
- $(petsc_with superlu superlu \ |
186 |
- /usr/include/superlu -lsuperlu) \ |
187 |
- $(petsc_with X x) \ |
188 |
- $(petsc_with X x11) \ |
189 |
- $(petsc_with scotch ptscotch \ |
190 |
- /usr/include/scotch \ |
191 |
- [-lptesmumps,-lptscotch,-lptscotcherr,-lscotch,-lscotcherr]) \ |
192 |
- $(petsc_with mumps scalapack \ |
193 |
- /usr/include/scalapack -lscalapack) \ |
194 |
- $(petsc_with mumps mumps \ |
195 |
- /usr/include \ |
196 |
- [-lcmumps,-ldmumps,-lsmumps,-lzmumps,-lmumps_common,-lpord]) \ |
197 |
- --with-imagemagick=0 \ |
198 |
- --with-python=0 \ |
199 |
- $(petsc_with boost) \ |
200 |
- $(petsc_with fftw) |
201 |
-} |
202 |
- |
203 |
-src_install() { |
204 |
- emake DESTDIR="${ED}" install |
205 |
- |
206 |
- # add PETSC_DIR to environmental variables |
207 |
- cat >> 99petsc <<- EOF |
208 |
- PETSC_DIR=${EPREFIX}/usr/$(get_libdir)/petsc |
209 |
- EOF |
210 |
- doenvd 99petsc |
211 |
- |
212 |
- if use doc ; then |
213 |
- dodoc docs/developers.pdf docs/manual.pdf |
214 |
- dohtml -r docs/*.html docs/changes docs/manualpages |
215 |
- fi |
216 |
-} |