Gentoo Archives: gentoo-commits

From: Matthias Maier <tamiko@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-mathematics/petsc/
Date: Fri, 31 Aug 2018 15:39:37
Message-Id: 1535685868.df3b9cb9a21f4e45de635f25cfec8b7c0ee42e74.tamiko@gentoo
1 commit: df3b9cb9a21f4e45de635f25cfec8b7c0ee42e74
2 Author: Matthias Maier <tamiko <AT> gentoo <DOT> org>
3 AuthorDate: Fri Aug 31 03:24:28 2018 +0000
4 Commit: Matthias Maier <tamiko <AT> gentoo <DOT> org>
5 CommitDate: Fri Aug 31 03:24:28 2018 +0000
6 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=df3b9cb9
7
8 sci-mathematics/petsc: drop old
9
10 Package-Manager: Portage-2.3.48, Repoman-2.3.10
11
12 sci-mathematics/petsc/petsc-3.9.0-r1.ebuild | 196 ----------------------------
13 1 file changed, 196 deletions(-)
14
15 diff --git a/sci-mathematics/petsc/petsc-3.9.0-r1.ebuild b/sci-mathematics/petsc/petsc-3.9.0-r1.ebuild
16 deleted file mode 100644
17 index 1755e242a..000000000
18 --- a/sci-mathematics/petsc/petsc-3.9.0-r1.ebuild
19 +++ /dev/null
20 @@ -1,196 +0,0 @@
21 -# Copyright 1999-2018 Gentoo Foundation
22 -# Distributed under the terms of the GNU General Public License v2
23 -
24 -EAPI=6
25 -
26 -PYTHON_COMPAT=( python2_7 )
27 -
28 -inherit eutils flag-o-matic fortran-2 python-any-r1 toolchain-funcs versionator
29 -
30 -MY_P="${PN}-$(replace_version_separator _ -)"
31 -
32 -DESCRIPTION="Portable, Extensible Toolkit for Scientific Computation"
33 -HOMEPAGE="http://www.mcs.anl.gov/petsc/"
34 -SRC_URI="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${MY_P}.tar.gz"
35 -
36 -LICENSE="BSD-2"
37 -SLOT="0"
38 -KEYWORDS="~x86 ~amd64"
39 -IUSE="afterimage boost complex-scalars cxx debug doc fftw
40 - fortran hdf5 hypre mpi metis mumps scotch sparse superlu threads X"
41 -
42 -# hypre and superlu curretly exclude each other due to missing linking to hypre
43 -# if both are enabled
44 -REQUIRED_USE="
45 - afterimage? ( X )
46 - complex-scalars? ( !hypre !superlu )
47 - hdf5? ( mpi )
48 - hypre? ( cxx mpi !superlu )
49 - mumps? ( mpi scotch )
50 - scotch? ( mpi )
51 - superlu? ( !hypre )
52 -"
53 -
54 -RDEPEND="
55 - virtual/blas
56 - virtual/lapack
57 - afterimage? ( media-libs/libafterimage )
58 - boost? ( dev-libs/boost )
59 - fftw? ( sci-libs/fftw:3.0[mpi?] )
60 - hdf5? ( sci-libs/hdf5[mpi?] )
61 - hypre? ( >=sci-libs/hypre-2.8.0b[mpi?] )
62 - metis? ( >=sci-libs/parmetis-4 )
63 - mpi? ( virtual/mpi[cxx?,fortran?] )
64 - mumps? ( sci-libs/mumps[mpi?] sci-libs/scalapack )
65 - scotch? ( sci-libs/scotch[mpi?] )
66 - sparse? ( sci-libs/suitesparse >=sci-libs/cholmod-1.7.0 )
67 - superlu? ( >=sci-libs/superlu-5 )
68 - X? ( x11-libs/libX11 )
69 -"
70 -
71 -DEPEND="${RDEPEND}
72 - ${PYTHON_DEPS}
73 - virtual/pkgconfig
74 - dev-util/cmake
75 -"
76 -
77 -S="${WORKDIR}/${MY_P}"
78 -
79 -PATCHES=(
80 - "${FILESDIR}"/${PN}-3.7.0-disable-rpath.patch \
81 - "${FILESDIR}"/${PN}-3.9.0-fix_sandbox_violation.patch
82 -)
83 -
84 -src_prepare() {
85 - default
86 -
87 - sed -i -e 's%/usr/bin/env python%/usr/bin/env python2%' configure || die
88 -}
89 -
90 -# petsc uses --with-blah=1 and --with-blah=0 to en/disable options
91 -petsc_enable() {
92 - use "$1" && echo "--with-${2:-$1}=1" || echo "--with-${2:-$1}=0"
93 -}
94 -# add external library:
95 -# petsc_with use_flag libname libdir
96 -# petsc_with use_flag libname include linking_libs
97 -petsc_with() {
98 - local myuse p=${2:-${1}}
99 - if use ${1}; then
100 - myuse="--with-${p}=1"
101 - if [[ $# -ge 4 ]]; then
102 - myuse="${myuse} --with-${p}-include=${EPREFIX}${3}"
103 - shift 3
104 - myuse="${myuse} --with-${p}-lib=$@"
105 - else
106 - myuse="${myuse} --with-${p}-dir=${EPREFIX}${3:-/usr}"
107 - fi
108 - else
109 - myuse="--with-${p}=0"
110 - fi
111 - echo ${myuse}
112 -}
113 -
114 -# select between configure options depending on use flag
115 -petsc_select() {
116 - use "$1" && echo "--with-$2=$3" || echo "--with-$2=$4"
117 -}
118 -
119 -src_configure() {
120 - # bug 548498
121 - # PETSc runs mpi processes during configure that result in a sandbox
122 - # violation by trying to open /proc/mtrr rw. This is not easy to
123 - # mitigate because it happens in libpciaccess.so called by libhwloc.so,
124 - # which is used by libmpi.so.
125 - addpredict /proc/mtrr
126 - # if mpi is built with knem support it needs /dev/knem too
127 - addpredict /dev/knem
128 -
129 - # configureMPITypes with openmpi-2* insists on accessing the scaling
130 - # governor rw.
131 - addpredict /sys/devices/system/cpu/
132 -
133 - local mylang
134 - local myopt
135 -
136 - use cxx && mylang="cxx" || mylang="c"
137 - use debug && myopt="debug" || myopt="opt"
138 -
139 - # environmental variables expected by petsc during build
140 -
141 - export PETSC_DIR="${S}"
142 - export PETSC_ARCH="linux-gnu-${mylang}-${myopt}"
143 -
144 - if use debug; then
145 - strip-flags
146 - filter-flags -O*
147 - fi
148 -
149 - # C Support on CXX builds is enabled if possible i.e. when not using
150 - # complex scalars (no complex type for both available at the same time)
151 -
152 - econf \
153 - scrollOutput=1 \
154 - FFLAGS="${FFLAGS} -fPIC" \
155 - CFLAGS="${CFLAGS} -fPIC" \
156 - CXXFLAGS="${CXXFLAGS} -fPIC" \
157 - LDFLAGS="${LDFLAGS}" \
158 - --prefix="${EPREFIX}/usr/$(get_libdir)/petsc" \
159 - --with-shared-libraries \
160 - --with-single-library \
161 - --with-clanguage=${mylang} \
162 - $(use cxx && ! use complex-scalars && echo "with-c-support=1") \
163 - --with-petsc-arch=${PETSC_ARCH} \
164 - --with-precision=double \
165 - --with-gnu-compilers \
166 - --with-blas-lapack-lib="$($(tc-getPKG_CONFIG) --libs lapack)" \
167 - $(petsc_enable debug debugging) \
168 - $(petsc_enable mpi) \
169 - $(petsc_select mpi cc mpicc $(tc-getCC)) \
170 - $(petsc_select mpi cxx mpicxx $(tc-getCXX)) \
171 - $(petsc_enable fortran) \
172 - $(use fortran && echo "$(petsc_select mpi fc mpif77 $(tc-getF77))") \
173 - $(petsc_enable mpi mpi-compilers) \
174 - $(petsc_select complex-scalars scalar-type complex real) \
175 - --with-windows-graphics=0 \
176 - --with-matlab=0 \
177 - --with-cmake=cmake \
178 - $(petsc_enable threads pthread) \
179 - $(petsc_with afterimage afterimage \
180 - /usr/include/libAfterImage -lAfterImage) \
181 - $(petsc_with hdf5) \
182 - $(petsc_with hypre hypre \
183 - /usr/include/hypre -lHYPRE) \
184 - $(petsc_with sparse suitesparse) \
185 - $(petsc_with superlu superlu \
186 - /usr/include/superlu -lsuperlu) \
187 - $(petsc_with X x) \
188 - $(petsc_with X x11) \
189 - $(petsc_with scotch ptscotch \
190 - /usr/include/scotch \
191 - [-lptesmumps,-lptscotch,-lptscotcherr,-lscotch,-lscotcherr]) \
192 - $(petsc_with mumps scalapack \
193 - /usr/include/scalapack -lscalapack) \
194 - $(petsc_with mumps mumps \
195 - /usr/include \
196 - [-lcmumps,-ldmumps,-lsmumps,-lzmumps,-lmumps_common,-lpord]) \
197 - --with-imagemagick=0 \
198 - --with-python=0 \
199 - $(petsc_with boost) \
200 - $(petsc_with fftw)
201 -}
202 -
203 -src_install() {
204 - emake DESTDIR="${ED}" install
205 -
206 - # add PETSC_DIR to environmental variables
207 - cat >> 99petsc <<- EOF
208 - PETSC_DIR=${EPREFIX}/usr/$(get_libdir)/petsc
209 - EOF
210 - doenvd 99petsc
211 -
212 - if use doc ; then
213 - dodoc docs/developers.pdf docs/manual.pdf
214 - dohtml -r docs/*.html docs/changes docs/manualpages
215 - fi
216 -}