From: | "Justin Lecher (jlec)" <jlec@g.o> |
---|---|
To: | gentoo-commits@l.g.o |
Subject: | [gentoo-commits] gentoo-x86 commit in sci-biology/rebase: ChangeLog rebase-1408.ebuild |
Date: | Thu, 31 Jul 2014 08:44:42 |
Message-Id: | 20140731084435.F1A8A2004E@flycatcher.gentoo.org |
1 | jlec 14/07/31 08:44:34 |
2 | |
3 | Modified: ChangeLog |
4 | Added: rebase-1408.ebuild |
5 | Log: |
6 | sci-biology/rebase: Version Bump |
7 | |
8 | (Portage version: 2.2.10/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!) |
9 | |
10 | Revision Changes Path |
11 | 1.125 sci-biology/rebase/ChangeLog |
12 | |
13 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.125&view=markup |
14 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.125&content-type=text/plain |
15 | diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?r1=1.124&r2=1.125 |
16 | |
17 | Index: ChangeLog |
18 | =================================================================== |
19 | RCS file: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v |
20 | retrieving revision 1.124 |
21 | retrieving revision 1.125 |
22 | diff -u -r1.124 -r1.125 |
23 | --- ChangeLog 27 Jul 2014 10:46:16 -0000 1.124 |
24 | +++ ChangeLog 31 Jul 2014 08:44:34 -0000 1.125 |
25 | @@ -1,6 +1,11 @@ |
26 | # ChangeLog for sci-biology/rebase |
27 | # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 |
28 | -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.124 2014/07/27 10:46:16 phajdan.jr Exp $ |
29 | +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.125 2014/07/31 08:44:34 jlec Exp $ |
30 | + |
31 | +*rebase-1408 (31 Jul 2014) |
32 | + |
33 | + 31 Jul 2014; Justin Lecher <jlec@g.o> +rebase-1408.ebuild: |
34 | + Version Bump |
35 | |
36 | 26 Jul 2014; Pawel Hajdan jr <phajdan.jr@g.o> rebase-1403.ebuild: |
37 | x86 stable wrt bug #512118 |
38 | |
39 | |
40 | |
41 | 1.1 sci-biology/rebase/rebase-1408.ebuild |
42 | |
43 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/rebase-1408.ebuild?rev=1.1&view=markup |
44 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/rebase-1408.ebuild?rev=1.1&content-type=text/plain |
45 | |
46 | Index: rebase-1408.ebuild |
47 | =================================================================== |
48 | # Copyright 1999-2014 Gentoo Foundation |
49 | # Distributed under the terms of the GNU General Public License v2 |
50 | # $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1408.ebuild,v 1.1 2014/07/31 08:44:34 jlec Exp $ |
51 | |
52 | EAPI=5 |
53 | |
54 | MY_PV=${PV#1} |
55 | |
56 | DESCRIPTION="A restriction enzyme database" |
57 | HOMEPAGE="http://rebase.neb.com" |
58 | SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" |
59 | |
60 | SLOT="0" |
61 | LICENSE="public-domain" |
62 | KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" |
63 | IUSE="emboss minimal" |
64 | |
65 | RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" |
66 | DEPEND="${RDEPEND}" |
67 | |
68 | RESTRICT="binchecks strip" |
69 | |
70 | src_compile() { |
71 | if use emboss; then |
72 | echo; einfo "Indexing Rebase for usage with EMBOSS." |
73 | mkdir REBASE || die |
74 | EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ |
75 | -protofile proto.${MY_PV} -equivalences \ |
76 | || die "Indexing Rebase failed." |
77 | echo |
78 | fi |
79 | } |
80 | |
81 | src_install() { |
82 | if ! use minimal; then |
83 | insinto /usr/share/${PN} |
84 | doins withrefm.${MY_PV} proto.${MY_PV} |
85 | fi |
86 | newdoc REBASE.DOC README |
87 | if use emboss; then |
88 | insinto /usr/share/EMBOSS/data/REBASE |
89 | doins REBASE/embossre.{enz,ref,sup} |
90 | insinto /usr/share/EMBOSS/data |
91 | doins REBASE/embossre.equ |
92 | fi |
93 | } |