Gentoo Archives: gentoo-commits

From: "Mike Gilbert (floppym)" <floppym@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-biology/pysam: pysam-0.6-r1.ebuild ChangeLog pysam-0.6.ebuild
Date: Mon, 30 Jun 2014 04:27:35
Message-Id: 20140630042729.6BDA12004E@flycatcher.gentoo.org
1 floppym 14/06/30 04:27:29
2
3 Modified: ChangeLog
4 Added: pysam-0.6-r1.ebuild
5 Removed: pysam-0.6.ebuild
6 Log:
7 Convert to distutils-r1. Depend on setuptools.
8
9 (Portage version: 2.2.10/cvs/Linux x86_64, signed Manifest commit with key 0BBEEA1FEA4843A4)
10
11 Revision Changes Path
12 1.4 sci-biology/pysam/ChangeLog
13
14 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/pysam/ChangeLog?rev=1.4&view=markup
15 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/pysam/ChangeLog?rev=1.4&content-type=text/plain
16 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/pysam/ChangeLog?r1=1.3&r2=1.4
17
18 Index: ChangeLog
19 ===================================================================
20 RCS file: /var/cvsroot/gentoo-x86/sci-biology/pysam/ChangeLog,v
21 retrieving revision 1.3
22 retrieving revision 1.4
23 diff -u -r1.3 -r1.4
24 --- ChangeLog 11 Mar 2013 16:50:14 -0000 1.3
25 +++ ChangeLog 30 Jun 2014 04:27:29 -0000 1.4
26 @@ -1,6 +1,12 @@
27 # ChangeLog for sci-biology/pysam
28 -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
29 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/pysam/ChangeLog,v 1.3 2013/03/11 16:50:14 jlec Exp $
30 +# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
31 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/pysam/ChangeLog,v 1.4 2014/06/30 04:27:29 floppym Exp $
32 +
33 +*pysam-0.6-r1 (30 Jun 2014)
34 +
35 + 30 Jun 2014; Mike Gilbert <floppym@g.o> +pysam-0.6-r1.ebuild,
36 + -pysam-0.6.ebuild:
37 + Convert to distutils-r1. Depend on setuptools.
38
39 11 Mar 2013; Justin Lecher <jlec@g.o> metadata.xml:
40 Drop Andrey as maintainer so that bugs get assigned to sci-biology directly
41 @@ -13,4 +19,3 @@
42 29 Jan 2012; Andrey Kislyuk <weaver@g.o> +pysam-0.6.ebuild,
43 +metadata.xml:
44 New package, ebuild written by me
45 -
46
47
48
49 1.1 sci-biology/pysam/pysam-0.6-r1.ebuild
50
51 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/pysam/pysam-0.6-r1.ebuild?rev=1.1&view=markup
52 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/pysam/pysam-0.6-r1.ebuild?rev=1.1&content-type=text/plain
53
54 Index: pysam-0.6-r1.ebuild
55 ===================================================================
56 # Copyright 1999-2014 Gentoo Foundation
57 # Distributed under the terms of the GNU General Public License v2
58 # $Header: /var/cvsroot/gentoo-x86/sci-biology/pysam/pysam-0.6-r1.ebuild,v 1.1 2014/06/30 04:27:29 floppym Exp $
59
60 EAPI="5"
61 PYTHON_COMPAT=( python2_7 )
62
63 inherit distutils-r1
64
65 DESCRIPTION="Python interface for the SAM/BAM sequence alignment and mapping format"
66 HOMEPAGE="http://code.google.com/p/pysam http://pypi.python.org/pypi/pysam"
67 SRC_URI="http://${PN}.googlecode.com/files/${P}.tar.gz"
68
69 LICENSE="MIT"
70 SLOT="0"
71 KEYWORDS="~amd64"
72 IUSE=""
73
74 DEPEND="dev-python/setuptools[${PYTHON_USEDEP}]"
75
76 python_compile() {
77 python_is_python3 || local -x CFLAGS="${CFLAGS} -fno-strict-aliasing"
78 distutils-r1_python_compile
79 }