[gentoo-commits] proj/sci:master commit in: sci-biology/pb-honey/

[Horea Christian]

commit:     f8c18e63a7bd3240ee469df7638e037c8b3e6b64
Author:     Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Sun Sep 27 20:57:50 2020 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Sun Sep 27 20:57:50 2020 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=f8c18e63

sci-biology/pb-honey: removed discontinued package

Package-Manager: Portage-3.0.8, Repoman-3.0.1
Signed-off-by: Horea Christian <chr <AT> chymera.eu>

 sci-biology/pb-honey/metadata.xml            | 15 ---------------
 sci-biology/pb-honey/pb-honey-14.1.15.ebuild | 25 -------------------------
 2 files changed, 40 deletions(-)

diff --git a/sci-biology/pb-honey/metadata.xml b/sci-biology/pb-honey/metadata.xml
deleted file mode 100644
index 1b533d8a5..000000000
--- a/sci-biology/pb-honey/metadata.xml
+++ /dev/null
@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="person">
-		<email>mmokrejs@×××××××××××××××.cz</email>
-		<name>Martin Mokrejs</name>
-	</maintainer>
-	<maintainer type="project">
-		<email>sci-biology@g.o</email>
-		<name>Gentoo Biology Project</name>
-	</maintainer>
-	<upstream>
-		<remote-id type="sourceforge">pb-jelly</remote-id>
-	</upstream>
-</pkgmetadata>

diff --git a/sci-biology/pb-honey/pb-honey-14.1.15.ebuild b/sci-biology/pb-honey/pb-honey-14.1.15.ebuild
deleted file mode 100644
index 1a4e10778..000000000
--- a/sci-biology/pb-honey/pb-honey-14.1.15.ebuild
+++ /dev/null
@@ -1,25 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit distutils-r1
-
-DESCRIPTION="Structural variant identification (SNV) using long reads (over 10kbp)"
-HOMEPAGE="https://www.hgsc.bcm.edu/software/honey"
-SRC_URI="http://sourceforge.net/projects/pb-jelly/files/PBHoney/PBHoney_14.1.15.tgz"
-
-LICENSE="BSD-2"
-SLOT="0"
-KEYWORDS=""
-IUSE=""
-
-DEPEND="
-	sci-biology/blasr
-	sci-biology/pysam[${PYTHON_USEDEP}]
-	sci-biology/samtools:0[${PYTHON_USEDEP}]
-	dev-python/h5py[${PYTHON_USEDEP}]
-	dev-python/numpy[${PYTHON_USEDEP}]"
-RDEPEND="${DEPEND}"