Gentoo Archives: gentoo-commits

From: Justin Lecher <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:jlec commit in: /
Date: Sat, 28 Feb 2015 20:59:02
Message-Id: 1419597193.fbcd05c7ceb44015d9b28c7374e6ea81c9df9592.jlec@gentoo
1 commit: fbcd05c7ceb44015d9b28c7374e6ea81c9df9592
2 Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
3 AuthorDate: Fri Dec 26 12:33:13 2014 +0000
4 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
5 CommitDate: Fri Dec 26 12:33:13 2014 +0000
6 URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=fbcd05c7
7
8 Merge branch 'master' into jlec
9
10 * master: (2007 commits)
11 .travis.yml: update portage version
12 fixed homepage and deps
13 Syncing fork
14 sci-astronomy/mosstack: New download url for mosstack. Added -r1-ebuild.
15 remove old
16 fixed deps (bug #529066)
17 fix installation
18 version bump; ebuild maintenance; fix SRC_URI
19 dev-python/pywcsgrid2: Update dep and add py3.4
20 sci-chemistry/freeon-9999: Add proper prefix flags to configure.
21 sci-biology/atsas: Add missing libs to installation
22 sci-biology/atsas: Add libdir to rpath
23 sync with gx86
24 sci-biology/atsas: Drop quotes
25 sci-biology/atsas: Add missing libpath
26 drop autotools-utils, empty DEPEND
27 sci-biology/bismark: Remove 'dodir' and break long lines.
28 fix libmaus herd to sci-biology
29 add metadata.xml
30 fix license: GPL-3
31 ...
32
33 Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
34
35 Conflicts:
36 sci-chemistry/chimera-bin/ChangeLog
37 sci-chemistry/chimera-bin/Manifest
38 sci-chemistry/chimera-bin/chimera-bin-1.6.2.ebuild
39 sci-chemistry/chimera-bin/chimera-bin-1.8.ebuild
40 sci-chemistry/chimera-bin/chimera-bin-1.9.ebuild
41
42
43 .gitignore | 1 +
44 .travis.yml | 24 +
45 CONTRIBUTING.md | 150 +
46 ChangeLog | 10 +
47 README.md | 15 +-
48 app-admin/eselect/ChangeLog | 54 +-
49 app-admin/eselect/Manifest | 7 +-
50 app-admin/eselect/eselect-1.3.5-r100.ebuild | 73 -
51 app-admin/eselect/eselect-1.3.7-r100.ebuild | 72 +
52 app-admin/eselect/eselect-1.3.8-r100.ebuild | 72 +
53 app-admin/eselect/eselect-1.4-r100.ebuild | 72 +
54 app-admin/eselect/eselect-1.4.1-r100.ebuild | 72 +
55 app-admin/eselect/eselect-1.4.2-r100.ebuild | 72 +
56 app-admin/eselect/eselect-1.4.3-r100.ebuild | 72 +
57 app-admin/eselect/eselect-9999.ebuild | 69 +
58 .../eselect/files/eselect-1.3.8-alternatives.patch | 616 +
59 .../eselect/files/eselect-1.4.2-alternatives.patch | 616 +
60 app-admin/eselect/metadata.xml | 6 +-
61 app-benchmarks/btl/btl-9999.ebuild | 2 +-
62 app-benchmarks/numbench/ChangeLog | 5 +-
63 app-benchmarks/numbench/numbench-0.2.ebuild | 2 +-
64 app-benchmarks/numbench/numbench-9999.ebuild | 4 +-
65 app-doc/blacs-docs/ChangeLog | 6 +-
66 app-doc/blacs-docs/blacs-docs-1.1.ebuild | 8 +-
67 app-doc/blacs-docs/metadata.xml | 4 +-
68 app-doc/blas-docs/ChangeLog | 6 +-
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70 app-doc/blas-docs/metadata.xml | 4 +-
71 app-doc/lapack-docs/ChangeLog | 6 +-
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75 app-doc/root-docs/Manifest | 9 +-
76 .../files/root-docs-6.00.01-fillpatterns.patch | 30 +
77 .../files/root-docs-6.00.01-makehtml.patch | 55 +
78 app-doc/root-docs/metadata.xml | 7 +
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90 app-portage/g-octave/g-octave-9999.ebuild | 5 +-
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92 app-shells/mpibash/Manifest | 31 +
93 .../files/bash-4.3-append-process-segfault.patch | 18 +
94 app-shells/mpibash/files/bash-4.3-compat-lvl.patch | 13 +
95 .../files/bash-4.3-parse-time-keyword.patch | 30 +
96 .../mpibash/files/bash-4.3-term-cleanup.patch | 47 +
97 app-shells/mpibash/files/mpibash-4.3.patch | 1565 ++
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113 .../freefem++-syntax-20081108-r1.ebuild | 17 -
114 app-vim/freefem++-syntax/metadata.xml | 9 -
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149 {dev-util/f90cache => dev-cpp/icnc}/metadata.xml | 0
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174 .../gluegen/files/2.1.4-dont-test-archive.patch | 16 +
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204 dev-java/joda-convert/Manifest | 1 -
205 dev-java/joda-convert/files/1.2-build.xml | 99 -
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1834 sci-libs/coinor-cbc/coinor-cbc-2.8.1.ebuild | 83 -
1835 sci-libs/coinor-cbc/metadata.xml | 11 -
1836 sci-libs/coinor-cgl/ChangeLog | 24 -
1837 sci-libs/coinor-cgl/Manifest | 1 -
1838 sci-libs/coinor-cgl/coinor-cgl-0.58.0.ebuild | 73 -
1839 sci-libs/coinor-cgl/metadata.xml | 12 -
1840 sci-libs/coinor-clp/ChangeLog | 27 -
1841 sci-libs/coinor-clp/Manifest | 1 -
1842 sci-libs/coinor-clp/coinor-clp-1.15.1.ebuild | 112 -
1843 .../files/coinor-clp-1.15.1-mpi-header.patch | 12 -
1844 sci-libs/coinor-clp/metadata.xml | 20 -
1845 sci-libs/coinor-couenne/ChangeLog | 15 -
1846 sci-libs/coinor-couenne/Manifest | 1 -
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1848 sci-libs/coinor-couenne/metadata.xml | 12 -
1849 sci-libs/coinor-cppad/ChangeLog | 25 -
1850 sci-libs/coinor-cppad/Manifest | 1 -
1851 sci-libs/coinor-cppad/coinor-cppad-20130526.ebuild | 54 -
1852 sci-libs/coinor-cppad/metadata.xml | 14 -
1853 sci-libs/coinor-csdp/ChangeLog | 12 -
1854 sci-libs/coinor-csdp/Manifest | 1 -
1855 sci-libs/coinor-csdp/coinor-csdp-6.1.1.ebuild | 100 -
1856 sci-libs/coinor-csdp/metadata.xml | 16 -
1857 sci-libs/coinor-dip/ChangeLog | 9 -
1858 sci-libs/coinor-dip/Manifest | 1 -
1859 sci-libs/coinor-dip/coinor-dip-0.83.2.ebuild | 62 -
1860 sci-libs/coinor-dip/metadata.xml | 14 -
1861 sci-libs/coinor-dylp/ChangeLog | 9 -
1862 sci-libs/coinor-dylp/Manifest | 1 -
1863 sci-libs/coinor-dylp/coinor-dylp-1.8.3.ebuild | 66 -
1864 sci-libs/coinor-dylp/metadata.xml | 12 -
1865 sci-libs/coinor-flopcpp/ChangeLog | 9 -
1866 sci-libs/coinor-flopcpp/Manifest | 1 -
1867 .../coinor-flopcpp/coinor-flopcpp-1.1.2.ebuild | 67 -
1868 sci-libs/coinor-flopcpp/metadata.xml | 14 -
1869 sci-libs/coinor-mp/ChangeLog | 9 -
1870 sci-libs/coinor-mp/Manifest | 1 -
1871 sci-libs/coinor-mp/coinor-mp-1.6.0.ebuild | 55 -
1872 sci-libs/coinor-mp/metadata.xml | 11 -
1873 sci-libs/coinor-netlib/ChangeLog | 19 -
1874 sci-libs/coinor-netlib/Manifest | 1 -
1875 sci-libs/coinor-netlib/coinor-netlib-1.2.4.ebuild | 23 -
1876 sci-libs/coinor-netlib/metadata.xml | 9 -
1877 sci-libs/coinor-os/ChangeLog | 9 -
1878 sci-libs/coinor-os/Manifest | 1 -
1879 sci-libs/coinor-os/coinor-os-2.6.0.ebuild | 69 -
1880 sci-libs/coinor-os/metadata.xml | 11 -
1881 sci-libs/coinor-osi/ChangeLog | 21 -
1882 sci-libs/coinor-osi/Manifest | 1 -
1883 sci-libs/coinor-osi/coinor-osi-0.106.0.ebuild | 76 -
1884 sci-libs/coinor-osi/metadata.xml | 15 -
1885 sci-libs/coinor-sample/ChangeLog | 25 -
1886 sci-libs/coinor-sample/Manifest | 1 -
1887 sci-libs/coinor-sample/coinor-sample-1.2.4.ebuild | 23 -
1888 sci-libs/coinor-sample/metadata.xml | 9 -
1889 sci-libs/coinor-symphony/ChangeLog | 21 -
1890 sci-libs/coinor-symphony/Manifest | 1 -
1891 .../coinor-symphony/coinor-symphony-5.4.7.ebuild | 89 -
1892 sci-libs/coinor-symphony/metadata.xml | 18 -
1893 sci-libs/coinor-utils/ChangeLog | 21 -
1894 sci-libs/coinor-utils/Manifest | 1 -
1895 sci-libs/coinor-utils/coinor-utils-2.9.0.ebuild | 85 -
1896 sci-libs/coinor-utils/metadata.xml | 15 -
1897 sci-libs/coinor-vol/ChangeLog | 12 -
1898 sci-libs/coinor-vol/Manifest | 1 -
1899 sci-libs/coinor-vol/coinor-vol-1.3.3.ebuild | 71 -
1900 sci-libs/coinor-vol/metadata.xml | 10 -
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1902 sci-libs/dcmtk/ChangeLog | 18 +-
1903 sci-libs/dcmtk/Manifest | 5 +-
1904 sci-libs/dcmtk/dcmtk-3.5.4-r3.ebuild | 71 -
1905 sci-libs/dcmtk/dcmtk-3.5.5_pre20101008.ebuild | 79 -
1906 sci-libs/dcmtk/dcmtk-3.6.0.ebuild | 75 +
1907 sci-libs/dcmtk/files/02_dcmtk_3.6.0-1.patch | 89 +
1908 sci-libs/dcmtk/files/bug674361.patch | 1015 ++
1909 sci-libs/dcmtk/files/dcmtk-asneeded.patch | 16 +
1910 sci-libs/dcmtk/files/dcmtk_version_number.patch | 131 +
1911 sci-libs/dcmtk/files/doubledes.patch | 31 +
1912 sci-libs/dcmtk/files/fixnull.patch | 36 +
1913 sci-libs/dcmtk/files/noleak.patch | 36 +
1914 sci-libs/dcmtk/files/nothrow.patch | 76 +
1915 sci-libs/dcmtk/files/prefs.patch | 26 +
1916 .../files/regression_stacksequenceisodd.patch | 98 +
1917 .../dcmtk/files/use_correct_number_of_TS.patch | 19 +
1918 sci-libs/dcmtk/metadata.xml | 30 +-
1919 sci-libs/dealii/ChangeLog | 40 +
1920 sci-libs/dealii/Manifest | 4 +
1921 sci-libs/dealii/dealii-8.1.0-r2.ebuild | 116 +
1922 sci-libs/dealii/dealii-8.2.0_rc2.ebuild | 1 +
1923 sci-libs/dealii/dealii-9999.ebuild | 124 +
1924 .../files/dealii-8.1.0-p4est1.0-support.patch | 271 +
1925 sci-libs/dealii/metadata.xml | 35 +
1926 sci-libs/driftwood/ChangeLog | 6 +-
1927 sci-libs/driftwood/driftwood-0.87.ebuild | 4 +-
1928 sci-libs/driftwood/metadata.xml | 2 +-
1929 sci-libs/elmer-eio/ChangeLog | 28 +
1930 sci-libs/elmer-eio/Manifest | 1 +
1931 sci-libs/elmer-eio/elmer-eio-6.0_p4651.ebuild | 33 +
1932 sci-libs/elmer-eio/elmer-eio-9999.ebuild | 40 +
1933 .../files/elmer-eio-6.0_p4651-shared.patch | 37 +
1934 .../elmer-eio}/metadata.xml | 0
1935 sci-libs/elmer-hutiter/ChangeLog | 18 +
1936 sci-libs/elmer-hutiter/Manifest | 1 +
1937 .../elmer-hutiter/elmer-hutiter-6.0_p4651.ebuild | 38 +
1938 sci-libs/elmer-hutiter/elmer-hutiter-9999.ebuild | 45 +
1939 .../files/elmer-hutiter-6.0_p4651-shared.patch | 33 +
1940 .../elmer-hutiter}/metadata.xml | 0
1941 sci-libs/etsf_io/ChangeLog | 13 +-
1942 sci-libs/etsf_io/Manifest | 1 +
1943 sci-libs/etsf_io/etsf_io-1.0.3-r2.ebuild | 2 +-
1944 sci-libs/etsf_io/etsf_io-1.0.4.ebuild | 35 +
1945 sci-libs/factory/factory-3.1.1-r1.ebuild | 2 +-
1946 sci-libs/factory/factory-3.1.1.ebuild | 2 +-
1947 sci-libs/fdlibm/fdlibm-5.3.ebuild | 4 +-
1948 sci-libs/fftw/ChangeLog | 28 +
1949 sci-libs/fftw/fftw-9999.ebuild | 184 +
1950 .../fftw/files/fftw-3.3.3-install-header.patch | 35 +
1951 sci-libs/fftw/metadata.xml | 23 +
1952 sci-libs/fgsl/ChangeLog | 6 +-
1953 sci-libs/fgsl/fgsl-0.9.3.ebuild | 30 +-
1954 sci-libs/fgsl/fgsl-0.9.4.ebuild | 29 +-
1955 sci-libs/fgsl/metadata.xml | 12 +-
1956 sci-libs/fox/fox-4.1.2-r2.ebuild | 2 +-
1957 sci-libs/fplll/ChangeLog | 7 -
1958 sci-libs/fplll/Manifest | 1 -
1959 sci-libs/fplll/fplll-2.1.6.ebuild | 40 -
1960 sci-libs/fplll/metadata.xml | 6 -
1961 sci-libs/framewave/framewave-1.3.1.ebuild | 2 +-
1962 sci-libs/geom/geom-5.1.2.7.ebuild | 2 +-
1963 sci-libs/ghmm/ChangeLog | 12 +-
1964 sci-libs/ghmm/files/ghmm-9999-clapack.patch | 11 +
1965 sci-libs/ghmm/files/ghmm-9999-link.patch | 24 +
1966 sci-libs/ghmm/files/ghmm-9999-obsolete.patch | 13 +
1967 sci-libs/ghmm/files/ghmm-9999-out-of-source.patch | 40 +
1968 sci-libs/ghmm/files/ghmm-9999-respect.patch | 10 +
1969 sci-libs/ghmm/ghmm-9999.ebuild | 58 +-
1970 sci-libs/givaro/givaro-3.2.13.ebuild | 2 +-
1971 sci-libs/givaro/givaro-3.3.0.ebuild | 2 +-
1972 sci-libs/gmsh/ChangeLog | 19 +-
1973 sci-libs/gmsh/Manifest | 2 +-
1974 sci-libs/gmsh/files/gmsh-2.5.0-libpng-1.5.patch | 10 -
1975 sci-libs/gmsh/files/gmsh-2.5.0-link.patch | 16 -
1976 sci-libs/gmsh/gmsh-2.5.0-r1.ebuild | 91 -
1977 sci-libs/gmsh/gmsh-2.5.0.ebuild | 92 -
1978 sci-libs/gmsh/gmsh-2.8.5.ebuild | 92 +
1979 sci-libs/gmsh/gmsh-9999.ebuild | 87 -
1980 sci-libs/gotoblas2/gotoblas2-1.13.ebuild | 2 +-
1981 sci-libs/gsl/ChangeLog | 18 +-
1982 sci-libs/gsl/Manifest | 2 +-
1983 sci-libs/gsl/files/gsl-1.15-cblas.patch | 286 -
1984 sci-libs/gsl/files/gsl-1.16-cblas-external.patch | 294 +
1985 sci-libs/gsl/gsl-1.15-r3.ebuild | 57 -
1986 sci-libs/gsl/gsl-1.16-r1.ebuild | 60 +
1987 sci-libs/gsl/gsl-1.16-r2.ebuild | 60 +
1988 sci-libs/gsl/metadata.xml | 12 +-
1989 sci-libs/iml/iml-1.0.3-r2.ebuild | 2 +-
1990 sci-libs/ipopt/ChangeLog | 24 -
1991 sci-libs/ipopt/Manifest | 1 -
1992 sci-libs/ipopt/ipopt-3.11.0.ebuild | 97 -
1993 sci-libs/ipopt/metadata.xml | 18 -
1994 sci-libs/itk/ChangeLog | 23 +
1995 sci-libs/itk/Manifest | 4 +
1996 ...p-TransformFileReader-TransformFileWriter.patch | 50 +
1997 ...itkQuasiNewtonOptimizerv4-wrapping-warnin.patch | 28 +
1998 ...itkGradientDescentOptimizerv4-wrapping-wa.patch | 73 +
1999 ...OptimizerParameterScalesEstimatorTemplate.patch | 30 +
2000 .../0005-make-gdcm-helper-library-static.patch | 11 +
2001 sci-libs/itk/files/nrrdio-linking.patch | 15 +
2002 sci-libs/itk/itk-4.4.2-r1.ebuild | 134 +
2003 sci-libs/itk/itk-4.4.2.ebuild | 116 +
2004 sci-libs/itk/itk-4.5.1.ebuild | 154 +
2005 sci-libs/itk/metadata.xml | 18 +
2006 sci-libs/k3match/ChangeLog | 6 +-
2007 sci-libs/k3match/k3match-1.1.ebuild | 14 +-
2008 sci-libs/k3match/metadata.xml | 16 +-
2009 sci-libs/lapack-reference/ChangeLog | 67 +-
2010 sci-libs/lapack-reference/Manifest | 1 +
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2012 .../lapack-reference/lapack-reference-9999.ebuild | 113 +-
2013 sci-libs/lapack-reference/metadata.xml | 11 +-
2014 sci-libs/lapacke-reference/ChangeLog | 6 +
2015 sci-libs/lapacke-reference/Manifest | 1 +
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2017 .../lapacke-reference-9999.ebuild | 6 +-
2018 sci-libs/lapackpp/lapackpp-2.5.4.ebuild | 2 +-
2019 sci-libs/lemon/ChangeLog | 20 -
2020 sci-libs/lemon/Manifest | 1 -
2021 sci-libs/lemon/lemon-1.2.3.ebuild | 34 -
2022 sci-libs/levmar/levmar-2.6.ebuild | 4 +-
2023 sci-libs/libcgnsoo/libcgnsoo-1728.ebuild | 2 +-
2024 sci-libs/libfac/libfac-3.1.0.ebuild | 2 +-
2025 sci-libs/libfac/libfac-3.1.1.ebuild | 2 +-
2026 sci-libs/libgeodecomp/ChangeLog | 8 +
2027 sci-libs/libgeodecomp/Manifest | 2 +
2028 sci-libs/libgeodecomp/libgeodecomp-0.1.0.ebuild | 2 +-
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2030 sci-libs/libgeodecomp/libgeodecomp-0.3.1.ebuild | 36 +
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2032 sci-libs/libgeodecomp/metadata.xml | 26 +-
2033 sci-libs/libmatheval/libmatheval-1.1.10.ebuild | 2 +-
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2035 sci-libs/libmaus/libmaus-0.0.185.ebuild | 18 +
2036 sci-libs/libmaus/metadata.xml | 14 +
2037 sci-libs/libsc/ChangeLog | 21 +
2038 sci-libs/libsc/Manifest | 2 +
2039 sci-libs/libsc/libsc-1.0.ebuild | 72 +
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2061 sci-libs/m4ri/m4ri-20100221.ebuild | 38 -
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2086 sci-libs/mkl/mkl-11.2.0.090.ebuild | 141 +
2087 sci-libs/mkl/mkl-11.2.1.133.ebuild | 143 +
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2089 sci-libs/mlpack/Manifest | 2 +-
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2093 sci-libs/modglue/ChangeLog | 19 +-
2094 sci-libs/modglue/Manifest | 2 +-
2095 sci-libs/modglue/files/modglue-1.16-ldflags.patch | 13 -
2096 sci-libs/modglue/files/modglue-1.16-lib64.patch | 61 -
2097 .../modglue/files/modglue-1.16-parallelmake.patch | 53 -
2098 .../modglue/files/modglue-1.19-Makefiles.patch | 113 +
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2109 sci-libs/mumps/Manifest | 1 -
2110 sci-libs/mumps/metadata.xml | 18 -
2111 sci-libs/mumps/mumps-4.10.0-r2.ebuild | 184 -
2112 sci-libs/ni-visa/ChangeLog | 6 +-
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2119 sci-libs/nibabel/nibabel-9999.ebuild | 42 +
2120 sci-libs/nipy/ChangeLog | 8 +
2121 sci-libs/nipy/Manifest | 1 +
2122 sci-libs/nipy/metadata.xml | 12 +
2123 sci-libs/nipy/nipy-0.3.0.ebuild | 37 +
2124 sci-libs/nipy/nipy-9999.ebuild | 38 +
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2157 sci-libs/p4est/p4est-1.0.ebuild | 99 +
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2169 sci-libs/pastix/metadata.xml | 20 +
2170 sci-libs/pastix/pastix-5.2.2_p9.ebuild | 113 +
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2197 sci-libs/scikits_image/metadata.xml | 17 +
2198 sci-libs/scikits_image/scikits_image-9999.ebuild | 47 +
2199 sci-libs/silo/Manifest | 1 +
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2221 sci-libs/superlu_mt/Manifest | 1 +
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2391 .../scilab/files/scilab-5.5.0-jdk1.8.patch | 76 +
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2458 sci-misc/elmer-gui/elmer-gui-9999.ebuild | 151 +
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2463 .../elmer-meshgen2d-6.0_p4651.ebuild | 34 +
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2877 sys-cluster/mpich2/mpich2-1.2.1_p1-r2.ebuild | 202 -
2878 sys-cluster/mpich2/mpich2-1.4.1_p1.ebuild | 179 -
2879 sys-cluster/mpich2/mpich2-1.5.ebuild | 4 +-
2880 sys-cluster/mvapich2/ChangeLog | 6 +-
2881 sys-cluster/mvapich2/mvapich2-1.6-r1.ebuild | 16 +-
2882 sys-cluster/nullmpi/ChangeLog | 5 +-
2883 sys-cluster/nullmpi/nullmpi-0.7.ebuild | 2 +-
2884 sys-cluster/nullmpi/nullmpi-9999.ebuild | 8 +-
2885 sys-cluster/openmpi/ChangeLog | 33 +-
2886 sys-cluster/openmpi/Manifest | 5 +-
2887 ...le-malloc-override-inside-of-Gentoo-sandb.patch | 42 +
2888 sys-cluster/openmpi/metadata.xml | 2 +
2889 sys-cluster/openmpi/openmpi-1.6.4.ebuild | 160 -
2890 sys-cluster/openmpi/openmpi-1.6.5.ebuild | 162 +
2891 sys-cluster/openmpi/openmpi-1.7.3.ebuild | 159 +
2892 sys-cluster/openmpi/openmpi-1.8.1.ebuild | 167 +
2893 sys-cluster/openmpi/openmpi-1.8.3.ebuild | 167 +
2894 sys-cluster/ovis/ovis-3.0.1.ebuild | 2 +-
2895 sys-cluster/projections/projections-6.2.1.ebuild | 2 +-
2896 sys-cluster/pyslice/ChangeLog | 8 +-
2897 sys-cluster/pyslice/Manifest | 2 +-
2898 sys-cluster/pyslice/metadata.xml | 4 +-
2899 sys-cluster/pyslice/pyslice-1.6.4-r1.ebuild | 24 -
2900 sys-cluster/pyslice/pyslice-1.7.ebuild | 21 +
2901 sys-devel/gdebugger/gdebugger-6.2.438.ebuild | 2 +-
2902 sys-infiniband/librxe/librxe-1.0.0.ebuild | 4 +-
2903 virtual/blacs/ChangeLog | 5 +-
2904 virtual/blacs/blacs-1.1.ebuild | 4 +-
2905 virtual/blacs/metadata.xml | 4 +-
2906 virtual/blas/ChangeLog | 17 +-
2907 virtual/blas/blas-2.1-r1.ebuild | 38 +
2908 virtual/blas/blas-2.1-r2.ebuild | 41 +
2909 virtual/blas/blas-2.1-r3.ebuild | 44 +
2910 virtual/blas/blas-2.1.ebuild | 25 -
2911 virtual/blas/metadata.xml | 4 +
2912 virtual/cblas/ChangeLog | 28 +-
2913 virtual/cblas/cblas-2.0-r1.ebuild | 28 +
2914 virtual/cblas/cblas-2.0-r2.ebuild | 31 +
2915 virtual/cblas/cblas-2.0-r3.ebuild | 35 +
2916 virtual/cblas/cblas-2.0.ebuild | 10 +-
2917 virtual/cblas/metadata.xml | 8 +-
2918 virtual/geant/ChangeLog | 5 +-
2919 virtual/geant/geant-3.ebuild | 4 +-
2920 virtual/lapack/ChangeLog | 20 +-
2921 virtual/lapack/lapack-3.4-r1.ebuild | 35 +
2922 virtual/lapack/lapack-3.4.ebuild | 23 -
2923 virtual/lapack/lapack-3.5-r1.ebuild | 33 +
2924 virtual/lapack/lapack-3.5-r2.ebuild | 34 +
2925 virtual/lapack/metadata.xml | 8 +-
2926 virtual/lapacke/ChangeLog | 12 +-
2927 virtual/lapacke/lapacke-1.0.ebuild | 4 +-
2928 virtual/lapacke/lapacke-3.5.ebuild | 19 +
2929 virtual/lapacke/metadata.xml | 4 +-
2930 virtual/mpi/ChangeLog | 18 +-
2931 virtual/mpi/mpi-2.0-r2.ebuild | 23 -
2932 virtual/mpi/mpi-2.0-r3.ebuild | 24 +
2933 virtual/perl-encoding-warnings/ChangeLog | 10 +
2934 .../perl-encoding-warnings}/metadata.xml | 0
2935 .../perl-encoding-warnings-0.11.ebuild | 16 +
2936 virtual/scalapack/ChangeLog | 6 +-
2937 virtual/scalapack/metadata.xml | 4 +-
2938 virtual/scalapack/scalapack-2.0.ebuild | 4 +-
2939 www-apps/py-swish-e/ChangeLog | 14 -
2940 www-apps/py-swish-e/Manifest | 1 -
2941 www-apps/py-swish-e/py-swish-e-0.5.ebuild | 23 -
2942 x11-libs/agg/ChangeLog | 30 +
2943 x11-libs/agg/Manifest | 1 +
2944 x11-libs/agg/agg-2.5-r3.ebuild | 68 +
2945 ...on-terminating-loop-conditions-when-len-1.patch | 81 +
2946 ...ion-by-aborting-if-the-co-ordinates-are-t.patch | 40 +
2947 ...ates-from-previous-vertex-if-last-command.patch | 30 +
2948 ...izer_outline_aa-ignore-close_polygon-when.patch | 138 +
2949 .../files/2.5/0005-Remove-VC-6-workaround.patch | 52 +
2950 ...-Implement-grain-merge-blending-mode-GIMP.patch | 85 +
2951 ...mplement-grain-extract-blending-mode-GIMP.patch | 85 +
2952 ...tiplication-and-division-operators-as-con.patch | 36 +
2953 ...0009-Add-a-static-identity-transformation.patch | 37 +
2954 .../2.5/0010-Add-renderer_scanline_aa_alpha.patch | 193 +
2955 ...Avoid-division-by-zero-in-color-burn-mode.patch | 58 +
2956 ...12-Avoid-pixel-artifacts-when-compositing.patch | 26 +
2957 ...conv-classes-to-allow-access-to-the-origi.patch | 93 +
2958 ...tial-zero-division-resulting-in-nan-in-ag.patch | 30 +
2959 ...t-value-in-the-gamma-table-is-always-zero.patch | 24 +
2960 x11-libs/agg/files/2.5/agg-2.4-depends.patch | 48 +
2961 x11-libs/agg/files/2.5/agg-2.5-autotools.patch | 11 +
2962 x11-libs/agg/files/2.5/agg-2.5-pkgconfig.patch | 10 +
2963 x11-libs/agg/files/2.5/agg-2.5-sdl-automagic.patch | 26 +
2964 x11-libs/agg/files/2.5/agg-2.5-sdl-m4.patch | 186 +
2965 x11-libs/agg/metadata.xml | 14 +
2966 x11-libs/tr/ChangeLog | 5 +-
2967 x11-libs/tr/Manifest | 2 +-
2968 x11-libs/tr/metadata.xml | 2 +-
2969 x11-libs/tr/tr-1.3.ebuild | 17 +-
2970 x11-libs/xview-bin/xview-bin-3.2_p1428.ebuild | 2 +-
2971 x11-libs/xview/ChangeLog | 7 +-
2972 x11-libs/xview/Manifest | 3 -
2973 x11-libs/xview/files/CAN-2005-0076.patch | 29 -
2974 x11-libs/xview/files/lseek.diff | 26 -
2975 x11-libs/xview/files/lseek2.diff | 22 -
2976 x11-libs/xview/xview-3.2-r6.ebuild | 105 -
2977 x11-libs/xview/xview-3.2-r7.ebuild | 108 -
2978 x11-libs/xview/xview-3.2-r8.ebuild | 6 +-
2979 x11-misc/envytools/ChangeLog | 8 +-
2980 x11-misc/envytools/envytools-9999.ebuild | 8 +-
2981 2938 files changed, 76407 insertions(+), 58972 deletions(-)