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To: gentoo-commits@g.o
From: "Justin Lecher" <jlec@g.o>
Subject: proj/sci:master commit in: licenses/
Date: Fri, 8 Jun 2012 12:51:47 +0000 (UTC)
commit:     d39f36f5c9b7f4fc66710976bdf278408cdbf75d
Author:     Justin Lecher <jlec <AT> gentoo <DOT> org>
AuthorDate: Thu Jun  7 15:49:52 2012 +0000
Commit:     Justin Lecher <jlec <AT> gentoo <DOT> org>
CommitDate: Thu Jun  7 15:49:52 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=d39f36f5

Drop unused licenses

---
 licenses/ASRP                                   |   37 --
 licenses/AZARA                                  |   86 ----
 licenses/Algodoo                                |   13 -
 licenses/ApE                                    |   19 -
 licenses/CARA                                   |    6 -
 licenses/CCPN                                   |   12 -
 licenses/CeCILL-C                               |  517 -----------------------
 licenses/Forthon                                |   32 --
 licenses/MolSoft                                |  111 -----
 licenses/Open-CASCADE-Technology-Public-License |  143 -------
 licenses/aldor-2                                |   49 ---
 licenses/amdlibm                                |  112 -----
 licenses/arb                                    |  302 -------------
 licenses/blat                                   |    9 -
 licenses/cctbx-2.0                              |   44 --
 licenses/dssp                                   |   39 --
 licenses/eGenixPublic-1.0                       |   86 ----
 licenses/fasta                                  |   26 --
 licenses/gmap                                   |   36 --
 licenses/oasis                                  |   56 ---
 licenses/procheck                               |  230 ----------
 licenses/psipred                                |   82 ----
 licenses/scalasca                               |   35 --
 licenses/tktreectrl                             |   38 --
 licenses/ucsf                                   |   13 -
 licenses/vina_license                           |  135 ------
 26 files changed, 0 insertions(+), 2268 deletions(-)

diff --git a/licenses/ASRP b/licenses/ASRP
deleted file mode 100644
index c21f348..0000000
--- a/licenses/ASRP
+++ /dev/null
@@ -1,37 +0,0 @@
-PyCIFRW COPYRIGHT AND LICENSING STATEMENT
-
-
-1.This Software copyright � Australian Synchrotron Research Program Inc, ("ASRP").
-
-2.Subject to ensuring that this copyright notice and licence terms
-appear on all copies and all modified versions, of PyCIFRW computer
-code ("this Software"), a royalty-free non-exclusive licence is hereby
-given (i) to use, copy and modify this Software including the use of
-reasonable portions of it in other software and (ii) to publish,
-bundle and otherwise re-distribute this Software or modified versions
-of this Software to third parties, provided that this copyright notice
-and terms are clearly shown as applying to all parts of software
-derived from this Software on each occasion it is published, bundled
-or re-distributed.  You are encouraged to communicate useful
-modifications to ASRP for inclusion for future versions.
-
-3.No part of this Software may be sold as a standalone package.
-
-4.If any part of this Software is bundled with Software that is sold,
-a free copy of the relevant version of this Software must be made
-available through the same distribution channel (be that web server,
-tape, CD or otherwise).
-
-5.It is a term of exercise of any of the above royalty free licence
-rights that ASRP gives no warranty, undertaking or representation
-whatsoever whether express or implied by statute, common law, custom
-or otherwise, in respect of this Software or any part of it.  Without
-limiting the generality of the preceding sentence, ASRP will not be
-liable for any injury, loss or damage (including consequential loss or
-damage) or other loss, loss of profits, costs, charges or expenses
-however caused which may be suffered, incurred or arise directly or
-indirectly in respect of this Software.
-
-6. This software is not licensed for use in medical applications.
-
-

diff --git a/licenses/AZARA b/licenses/AZARA
deleted file mode 100644
index bb94b12..0000000
--- a/licenses/AZARA
+++ /dev/null
@@ -1,86 +0,0 @@
-	Azara, v2.7, copyright (C) 1993-2002 Wayne Boucher
-	and Department of Biochemistry, University of Cambridge.
-
-This is a license for Azara, v2.7.
-
-This license is to be signed by you on behalf of your institution
-(hereinafter referred to as the "LICENSEE"), and returned to
-Wayne Boucher (hereinafter referred to as the "LICENSOR").
-The computer program, including source code and documentation,
-are hereinafter referred to as the "SOFTWARE".
-
-Terms of the License
-
-1.  A non-exclusive, non-transferable license is granted to the LICENSEE
-to install and use the SOFTWARE on an appropriate computer system or systems
-located at LICENSEE's institution to which the LICENSEE has authorized access.
-Use of the SOFTWARE is restricted to LICENSEE and any collaborators at this
-institution who have agreed to accept the terms of this license.
-
-2.  The LICENSOR retains ownership of all materials (including magnetic tape,
-unless provided by the LICENSEE) and SOFTWARE delivered to LICENSEE.  Any
-modifications or derivative works based on the SOFTWARE are considered part
-of the SOFTWARE and ownership thereof is retained by the LICENSOR, and are
-to be made available to him upon request.
-
-3.  The LICENSEE may make a reasonable number of copies of the SOFTWARE for
-the purposes of backup, maintenance of the SOFTWARE, or development of
-derivative works based on the SOFTWARE.  These additional copies will carry
-the copyright notice and will be controlled by this license, and will be
-destroyed by the LICENSEE upon termination of this license.
-
-4.  The LICENSEE shall not use SOFTWARE for any purpose (research or
-otherwise) that is supported by a "for profit" organization without prior
-written authorization from the LICENSOR.
-
-5.  The LICENSEE shall not disclose in any form either the delivered SOFTWARE
-or any modifications or derivative works based on the SOFTWARE to third
-parties without prior written authorization from the LICENSOR.
-
-6.  If the LICENSEE receives a request to furnish all or any portion of the
-SOFTWARE to any third party, he will not fulfill such a request, and will
-refer it in writing to the LICENSOR.
-
-7.  The LICENSEE agrees that the SOFTWARE is furnished on an "as is" basis,
-and that the LICENSOR in no way warrants the SOFTWARE or any of its results
-and is in no way liable for any use LICENSEE makes of the SOFTWARE.
-
-8.  LICENSEE agrees that any reports or publications of results obtained with
-the SOFTWARE will acknowledge its use by an appropriate citation, such as
-
-	"Data were processed [in part] using the Azara suite of programs,
-	provided by Wayne Boucher and the Department of Biochemistry,
-	University of Cambridge.  The code may be obtained via anonymous
-	ftp to www.bio.cam.ac.uk in the directory ~ftp/pub/azara."
-
-9.  The terms of this license shall not be limited in time.
-
-To evidence your acceptance of the terms and conditions set forth above,
-please sign in the indicated space and return this letter to the LICENSOR.
-
-
-Wayne Boucher
-
-
-
-_________________________  Date
-
-
-
-_________________________________________________________________ Signature
-
-
-
-_________________________________________________________________ Name
-
-
-
-_________________________________________________________________ Institution
-
-
-
-_________________________________________________________________ Address
-
-
-
-_________________________________________________________________ Email

diff --git a/licenses/Algodoo b/licenses/Algodoo
deleted file mode 100644
index e9dce58..0000000
--- a/licenses/Algodoo
+++ /dev/null
@@ -1,13 +0,0 @@
-ALGODOO PHUN EDITION PUBLIC BETA LICENSE
-
-This is to keep our legal advicers happy. Read these terms carefully before installing this software. By installing this software, you acknowledge that you have read this license agreement, that you understood it, and that you agree to be bound by its terms. If you do not agree to the terms and conditions of this license agreement, you should cancel the installation of the software.
-
-Algodoo is commercial software owned by Algoryx Simulation AB. Subject to the terms below, you are hereby licensed by Algoryx Simulation AB to use this single copy of Algodoo Phun Edition Public for beta testing, evalution. The license is restricted to personal, individual use. Professional or commercial use of the software requires a full commercial license of the full Algodoo product and can be purchased from Algoryx Simulation AB, or from a reseller auhtorized by Algoryx Simulation AB. Refer to http://www.algoryx.se/algodoo for information about license pricing, multi-user licensing, ordering and delivery. 
-
-Please note that Algodoo Phun Edition is public beta software, i.e. a public pre release of the full Algodoo product. Algoryx Simulation AB does not provide service or support for Algodoo Phun Edition.
-
-The full Algodoo product comes with service and support, lecture and instructional material, additional features, such as visualization of forces and velocities, optics, snap-to-grid, built-in video recording, webcam support, texture-to-geometry conversion, and much more. The full Algodoo product is also powered with Algoryx AgX leading simulation technologies for improved performance, realism and stability.
-
-The software is provided as is, without warranty of any kind, express or implied, including but not limited to the warranties of merchantability, fitness for a particular purpose and noninfringement of third party rights. In no event shall the authors or copyright holders, Algoryx Simulation AB, be liable for any claim, damages or other liability, whether in an action of contract, tort or otherwise, arising from, out or in connection with the software or the use or other dealings in the software.
-
-Have phun!
\ No newline at end of file

diff --git a/licenses/ApE b/licenses/ApE
deleted file mode 100644
index 2fe2cc3..0000000
--- a/licenses/ApE
+++ /dev/null
@@ -1,19 +0,0 @@
-Copyright and Disclaimer
-This software is copyright 2003-2004 by M. Wayne Davis.
-
-All copies are not for redistribution and should be obtained from the author.
-The author hereby grants permission to use, copy, and modify this software for any purpose. Modifications to this software may only be used by their authors and may not be re-distributed in any form. No written agreement, license, or royalty fee is required for any of the authorized uses.
-
-
-IN NO EVENT SHALL THE AUTHOR OR DISTRIBUTOR BE LIABLE TO ANY PARTY
-FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES
-ARISING OUT OF THE USE OF THIS SOFTWARE, ITS DOCUMENTATION, OR ANY
-DERIVATIVES THEREOF, EVEN IF THE AUTHORS HAVE BEEN ADVISED OF THE
-POSSIBILITY OF SUCH DAMAGE.
-
-THE AUTHOR AND DISTRIBUTOR SPECIFICALLY DISCLAIM ANY WARRANTIES,
-INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY,
-FITNESS FOR A PARTICULAR PURPOSE, AND NON-INFRINGEMENT.  THIS SOFTWARE
-IS PROVIDED ON AN "AS IS" BASIS, AND THE AUTHOR AND DISTRIBUTOR HAVE
-NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS, OR
-MODIFICATIONS.

diff --git a/licenses/CARA b/licenses/CARA
deleted file mode 100644
index 1b8b213..0000000
--- a/licenses/CARA
+++ /dev/null
@@ -1,6 +0,0 @@
-CARA is freeware, i.e. it can be used for free by anyone. The users are obligated to mention the use of CARA in their resulting publications*.
-The software and documentation are provided as is, without warranty of any kind, expressed or implied, including but not limited to the warranties of merchantability, fitness for a particular purpose and noninfringement. In no event shall the authors or copyright holders be liable for any claim, damages or other liability, whether in an action of contract, tort or otherwise, arising from, out of or in connection with the software or the use or other dealings in the software.
- 
-
-*
-Please reference the book The Computer Aided Resonance Assignment Tutorial by Rochus Keller, first edition 2004, ISBN 3-85600-112-3, CANTINA Verlag. Alternatively you can cite Rochus' PhD thesis, Diss. ETH Nr. 15947. It would also be helpful if you could mention in your publication that CARA can be downloaded for free from www.nmr.ch.
\ No newline at end of file

diff --git a/licenses/CCPN b/licenses/CCPN
deleted file mode 100644
index 1f29585..0000000
--- a/licenses/CCPN
+++ /dev/null
@@ -1,12 +0,0 @@
-CCPN temporary license
-
-We have not yet had time to create a proper CCPN license for those
-parts of the software which are not LGPL.  So for now we have the
-following temporary license.
-
-The programs which fall under this license contain reserved and/or
-proprietary information belonging to the author and/or organisation
-holding the copyright.  They may not be used, distributed, modified,
-transmitted, stored, or in any way accessed, except by members or
-employees of the CCPN, and by these people only until 31 December 2006
-and in accordance with the guidelines of the CCPN.

diff --git a/licenses/CeCILL-C b/licenses/CeCILL-C
deleted file mode 100644
index 3d2a819..0000000
--- a/licenses/CeCILL-C
+++ /dev/null
@@ -1,517 +0,0 @@
-
-CeCILL-C FREE SOFTWARE LICENSE AGREEMENT
-
-
-    Notice
-
-This Agreement is a Free Software license agreement that is the result
-of discussions between its authors in order to ensure compliance with
-the two main principles guiding its drafting:
-
-    * firstly, compliance with the principles governing the distribution
-      of Free Software: access to source code, broad rights granted to
-      users,
-    * secondly, the election of a governing law, French law, with which
-      it is conformant, both as regards the law of torts and
-      intellectual property law, and the protection that it offers to
-      both authors and holders of the economic rights over software.
-
-The authors of the CeCILL-C (for Ce[a] C[nrs] I[nria] L[ogiciel] L[ibre])
-license are:
-
-Commissariat �'Energie Atomique - CEA, a public scientific, technical
-and industrial research establishment, having its principal place of
-business at 25 rue Leblanc, immeuble Le Ponant D, 75015 Paris, France.
-
-Centre National de la Recherche Scientifique - CNRS, a public scientific
-and technological establishment, having its principal place of business
-at 3 rue Michel-Ange, 75794 Paris cedex 16, France.
-
-Institut National de Recherche en Informatique et en Automatique -
-INRIA, a public scientific and technological establishment, having its
-principal place of business at Domaine de Voluceau, Rocquencourt, BP
-105, 78153 Le Chesnay cedex, France.
-
-
-    Preamble
-
-The purpose of this Free Software license agreement is to grant users
-the right to modify and re-use the software governed by this license.
-
-The exercising of this right is conditional upon the obligation to make
-available to the community the modifications made to the source code of
-the software so as to contribute to its evolution.
-
-In consideration of access to the source code and the rights to copy,
-modify and redistribute granted by the license, users are provided only
-with a limited warranty and the software's author, the holder of the
-economic rights, and the successive licensors only have limited liability.
-
-In this respect, the risks associated with loading, using, modifying
-and/or developing or reproducing the software by the user are brought to
-the user's attention, given its Free Software status, which may make it
-complicated to use, with the result that its use is reserved for
-developers and experienced professionals having in-depth computer
-knowledge. Users are therefore encouraged to load and test the
-suitability of the software as regards their requirements in conditions
-enabling the security of their systems and/or data to be ensured and,
-more generally, to use and operate it in the same conditions of
-security. This Agreement may be freely reproduced and published,
-provided it is not altered, and that no provisions are either added or
-removed herefrom.
-
-This Agreement may apply to any or all software for which the holder of
-the economic rights decides to submit the use thereof to its provisions.
-
-
-    Article 1 - DEFINITIONS
-
-For the purpose of this Agreement, when the following expressions
-commence with a capital letter, they shall have the following meaning:
-
-Agreement: means this license agreement, and its possible subsequent
-versions and annexes.
-
-Software: means the software in its Object Code and/or Source Code form
-and, where applicable, its documentation, "as is" when the Licensee
-accepts the Agreement.
-
-Initial Software: means the Software in its Source Code and possibly its
-Object Code form and, where applicable, its documentation, "as is" when
-it is first distributed under the terms and conditions of the Agreement.
-
-Modified Software: means the Software modified by at least one
-Integrated Contribution.
-
-Source Code: means all the Software's instructions and program lines to
-which access is required so as to modify the Software.
-
-Object Code: means the binary files originating from the compilation of
-the Source Code.
-
-Holder: means the holder(s) of the economic rights over the Initial
-Software.
-
-Licensee: means the Software user(s) having accepted the Agreement.
-
-Contributor: means a Licensee having made at least one Integrated
-Contribution.
-
-Licensor: means the Holder, or any other individual or legal entity, who
-distributes the Software under the Agreement.
-
-Integrated Contribution: means any or all modifications, corrections,
-translations, adaptations and/or new functions integrated into the
-Source Code by any or all Contributors.
-
-Related Module: means a set of sources files including their
-documentation that, without modification to the Source Code, enables
-supplementary functions or services in addition to those offered by the
-Software.
-
-Derivative Software: means any combination of the Software, modified or
-not, and of a Related Module.
-
-Parties: mean both the Licensee and the Licensor.
-
-These expressions may be used both in singular and plural form.
-
-
-    Article 2 - PURPOSE
-
-The purpose of the Agreement is the grant by the Licensor to the
-Licensee of a non-exclusive, transferable and worldwide license for the
-Software as set forth in Article 5 hereinafter for the whole term of the
-protection granted by the rights over said Software. 
-
-
-    Article 3 - ACCEPTANCE
-
-3.1 The Licensee shall be deemed as having accepted the terms and
-conditions of this Agreement upon the occurrence of the first of the
-following events:
-
-    * (i) loading the Software by any or all means, notably, by
-      downloading from a remote server, or by loading from a physical
-      medium;
-    * (ii) the first time the Licensee exercises any of the rights
-      granted hereunder.
-
-3.2 One copy of the Agreement, containing a notice relating to the
-characteristics of the Software, to the limited warranty, and to the
-fact that its use is restricted to experienced users has been provided
-to the Licensee prior to its acceptance as set forth in Article 3.1
-hereinabove, and the Licensee hereby acknowledges that it has read and
-understood it.
-
-
-    Article 4 - EFFECTIVE DATE AND TERM
-
-
-      4.1 EFFECTIVE DATE
-
-The Agreement shall become effective on the date when it is accepted by
-the Licensee as set forth in Article 3.1.
-
-
-      4.2 TERM
-
-The Agreement shall remain in force for the entire legal term of
-protection of the economic rights over the Software.
-
-
-    Article 5 - SCOPE OF RIGHTS GRANTED
-
-The Licensor hereby grants to the Licensee, who accepts, the following
-rights over the Software for any or all use, and for the term of the
-Agreement, on the basis of the terms and conditions set forth hereinafter.
-
-Besides, if the Licensor owns or comes to own one or more patents
-protecting all or part of the functions of the Software or of its
-components, the Licensor undertakes not to enforce the rights granted by
-these patents against successive Licensees using, exploiting or
-modifying the Software. If these patents are transferred, the Licensor
-undertakes to have the transferees subscribe to the obligations set
-forth in this paragraph.
-
-
-      5.1 RIGHT OF USE
-
-The Licensee is authorized to use the Software, without any limitation
-as to its fields of application, with it being hereinafter specified
-that this comprises:
-
-   1. permanent or temporary reproduction of all or part of the Software
-      by any or all means and in any or all form.
-
-   2. loading, displaying, running, or storing the Software on any or
-      all medium.
-
-   3. entitlement to observe, study or test its operation so as to
-      determine the ideas and principles behind any or all constituent
-      elements of said Software. This shall apply when the Licensee
-      carries out any or all loading, displaying, running, transmission
-      or storage operation as regards the Software, that it is entitled
-      to carry out hereunder.
-
-
-      5.2 RIGHT OF MODIFICATION
-
-The right of modification includes the right to translate, adapt,
-arrange, or make any or all modifications to the Software, and the right
-to reproduce the resulting software. It includes, in particular, the
-right to create a Derivative Software.
-
-The Licensee is authorized to make any or all modification to the
-Software provided that it includes an explicit notice that it is the
-author of said modification and indicates the date of the creation thereof.
-
-
-      5.3 RIGHT OF DISTRIBUTION
-
-In particular, the right of distribution includes the right to publish,
-transmit and communicate the Software to the general public on any or
-all medium, and by any or all means, and the right to market, either in
-consideration of a fee, or free of charge, one or more copies of the
-Software by any means.
-
-The Licensee is further authorized to distribute copies of the modified
-or unmodified Software to third parties according to the terms and
-conditions set forth hereinafter.
-
-
-        5.3.1 DISTRIBUTION OF SOFTWARE WITHOUT MODIFICATION
-
-The Licensee is authorized to distribute true copies of the Software in
-Source Code or Object Code form, provided that said distribution
-complies with all the provisions of the Agreement and is accompanied by:
-
-   1. a copy of the Agreement,
-
-   2. a notice relating to the limitation of both the Licensor's
-      warranty and liability as set forth in Articles 8 and 9,
-
-and that, in the event that only the Object Code of the Software is
-redistributed, the Licensee allows effective access to the full Source
-Code of the Software at a minimum during the entire period of its
-distribution of the Software, it being understood that the additional
-cost of acquiring the Source Code shall not exceed the cost of
-transferring the data.
-
-
-        5.3.2 DISTRIBUTION OF MODIFIED SOFTWARE
-
-When the Licensee makes an Integrated Contribution to the Software, the
-terms and conditions for the distribution of the resulting Modified
-Software become subject to all the provisions of this Agreement.
-
-The Licensee is authorized to distribute the Modified Software, in
-source code or object code form, provided that said distribution
-complies with all the provisions of the Agreement and is accompanied by:
-
-   1. a copy of the Agreement,
-
-   2. a notice relating to the limitation of both the Licensor's
-      warranty and liability as set forth in Articles 8 and 9,
-
-and that, in the event that only the object code of the Modified
-Software is redistributed, the Licensee allows effective access to the
-full source code of the Modified Software at a minimum during the entire
-period of its distribution of the Modified Software, it being understood
-that the additional cost of acquiring the source code shall not exceed
-the cost of transferring the data.
-
-
-        5.3.3 DISTRIBUTION OF DERIVATIVE SOFTWARE
-
-When the Licensee creates Derivative Software, this Derivative Software
-may be distributed under a license agreement other than this Agreement,
-subject to compliance with the requirement to include a notice
-concerning the rights over the Software as defined in Article 6.4.
-In the event the creation of the Derivative Software required modification 
-of the Source Code, the Licensee undertakes that:
-
-   1. the resulting Modified Software will be governed by this Agreement,
-   2. the Integrated Contributions in the resulting Modified Software
-      will be clearly identified and documented,
-   3. the Licensee will allow effective access to the source code of the
-      Modified Software, at a minimum during the entire period of
-      distribution of the Derivative Software, such that such
-      modifications may be carried over in a subsequent version of the
-      Software; it being understood that the additional cost of
-      purchasing the source code of the Modified Software shall not
-      exceed the cost of transferring the data.
-
-
-        5.3.4 COMPATIBILITY WITH THE CeCILL LICENSE
-
-When a Modified Software contains an Integrated Contribution subject to
-the CeCILL license agreement, or when a Derivative Software contains a
-Related Module subject to the CeCILL license agreement, the provisions
-set forth in the third item of Article 6.4 are optional.
-
-
-    Article 6 - INTELLECTUAL PROPERTY
-
-
-      6.1 OVER THE INITIAL SOFTWARE
-
-The Holder owns the economic rights over the Initial Software. Any or
-all use of the Initial Software is subject to compliance with the terms
-and conditions under which the Holder has elected to distribute its work
-and no one shall be entitled to modify the terms and conditions for the
-distribution of said Initial Software.
-
-The Holder undertakes that the Initial Software will remain ruled at
-least by this Agreement, for the duration set forth in Article 4.2.
-
-
-      6.2 OVER THE INTEGRATED CONTRIBUTIONS
-
-The Licensee who develops an Integrated Contribution is the owner of the
-intellectual property rights over this Contribution as defined by
-applicable law.
-
-
-      6.3 OVER THE RELATED MODULES
-
-The Licensee who develops a Related Module is the owner of the
-intellectual property rights over this Related Module as defined by
-applicable law and is free to choose the type of agreement that shall
-govern its distribution under the conditions defined in Article 5.3.3.
-
-
-      6.4 NOTICE OF RIGHTS
-
-The Licensee expressly undertakes:
-
-   1. not to remove, or modify, in any manner, the intellectual property
-      notices attached to the Software;
-
-   2. to reproduce said notices, in an identical manner, in the copies
-      of the Software modified or not;
-
-   3. to ensure that use of the Software, its intellectual property
-      notices and the fact that it is governed by the Agreement is
-      indicated in a text that is easily accessible, specifically from
-      the interface of any Derivative Software.
-
-The Licensee undertakes not to directly or indirectly infringe the
-intellectual property rights of the Holder and/or Contributors on the
-Software and to take, where applicable, vis-�is its staff, any and all
-measures required to ensure respect of said intellectual property rights
-of the Holder and/or Contributors.
-
-
-    Article 7 - RELATED SERVICES
-
-7.1 Under no circumstances shall the Agreement oblige the Licensor to
-provide technical assistance or maintenance services for the Software.
-
-However, the Licensor is entitled to offer this type of services. The
-terms and conditions of such technical assistance, and/or such
-maintenance, shall be set forth in a separate instrument. Only the
-Licensor offering said maintenance and/or technical assistance services
-shall incur liability therefor.
-
-7.2 Similarly, any Licensor is entitled to offer to its licensees, under
-its sole responsibility, a warranty, that shall only be binding upon
-itself, for the redistribution of the Software and/or the Modified
-Software, under terms and conditions that it is free to decide. Said
-warranty, and the financial terms and conditions of its application,
-shall be subject of a separate instrument executed between the Licensor
-and the Licensee.
-
-
-    Article 8 - LIABILITY
-
-8.1 Subject to the provisions of Article 8.2, the Licensee shall be
-entitled to claim compensation for any direct loss it may have suffered
-from the Software as a result of a fault on the part of the relevant
-Licensor, subject to providing evidence thereof.
-
-8.2 The Licensor's liability is limited to the commitments made under
-this Agreement and shall not be incurred as a result of in particular:
-(i) loss due the Licensee's total or partial failure to fulfill its
-obligations, (ii) direct or consequential loss that is suffered by the
-Licensee due to the use or performance of the Software, and (iii) more
-generally, any consequential loss. In particular the Parties expressly
-agree that any or all pecuniary or business loss (i.e. loss of data,
-loss of profits, operating loss, loss of customers or orders,
-opportunity cost, any disturbance to business activities) or any or all
-legal proceedings instituted against the Licensee by a third party,
-shall constitute consequential loss and shall not provide entitlement to
-any or all compensation from the Licensor.
-
-
-    Article 9 - WARRANTY
-
-9.1 The Licensee acknowledges that the scientific and technical
-state-of-the-art when the Software was distributed did not enable all
-possible uses to be tested and verified, nor for the presence of
-possible defects to be detected. In this respect, the Licensee's
-attention has been drawn to the risks associated with loading, using,
-modifying and/or developing and reproducing the Software which are
-reserved for experienced users.
-
-The Licensee shall be responsible for verifying, by any or all means,
-the suitability of the product for its requirements, its good working
-order, and for ensuring that it shall not cause damage to either persons
-or properties.
-
-9.2 The Licensor hereby represents, in good faith, that it is entitled
-to grant all the rights over the Software (including in particular the
-rights set forth in Article 5).
-
-9.3 The Licensee acknowledges that the Software is supplied "as is" by
-the Licensor without any other express or tacit warranty, other than
-that provided for in Article 9.2 and, in particular, without any warranty
-as to its commercial value, its secured, safe, innovative or relevant
-nature.
-
-Specifically, the Licensor does not warrant that the Software is free
-from any error, that it will operate without interruption, that it will
-be compatible with the Licensee's own equipment and software
-configuration, nor that it will meet the Licensee's requirements.
-
-9.4 The Licensor does not either expressly or tacitly warrant that the
-Software does not infringe any third party intellectual property right
-relating to a patent, software or any other property right. Therefore,
-the Licensor disclaims any and all liability towards the Licensee
-arising out of any or all proceedings for infringement that may be
-instituted in respect of the use, modification and redistribution of the
-Software. Nevertheless, should such proceedings be instituted against
-the Licensee, the Licensor shall provide it with technical and legal
-assistance for its defense. Such technical and legal assistance shall be
-decided on a case-by-case basis between the relevant Licensor and the
-Licensee pursuant to a memorandum of understanding. The Licensor
-disclaims any and all liability as regards the Licensee's use of the
-name of the Software. No warranty is given as regards the existence of
-prior rights over the name of the Software or as regards the existence
-of a trademark.
-
-
-    Article 10 - TERMINATION
-
-10.1 In the event of a breach by the Licensee of its obligations
-hereunder, the Licensor may automatically terminate this Agreement
-thirty (30) days after notice has been sent to the Licensee and has
-remained ineffective.
-
-10.2 A Licensee whose Agreement is terminated shall no longer be
-authorized to use, modify or distribute the Software. However, any
-licenses that it may have granted prior to termination of the Agreement
-shall remain valid subject to their having been granted in compliance
-with the terms and conditions hereof.
-
-
-    Article 11 - MISCELLANEOUS
-
-
-      11.1 EXCUSABLE EVENTS
-
-Neither Party shall be liable for any or all delay, or failure to
-perform the Agreement, that may be attributable to an event of force
-majeure, an act of God or an outside cause, such as defective
-functioning or interruptions of the electricity or telecommunications
-networks, network paralysis following a virus attack, intervention by
-government authorities, natural disasters, water damage, earthquakes,
-fire, explosions, strikes and labor unrest, war, etc.
-
-11.2 Any failure by either Party, on one or more occasions, to invoke
-one or more of the provisions hereof, shall under no circumstances be
-interpreted as being a waiver by the interested Party of its right to
-invoke said provision(s) subsequently.
-
-11.3 The Agreement cancels and replaces any or all previous agreements,
-whether written or oral, between the Parties and having the same
-purpose, and constitutes the entirety of the agreement between said
-Parties concerning said purpose. No supplement or modification to the
-terms and conditions hereof shall be effective as between the Parties
-unless it is made in writing and signed by their duly authorized
-representatives.
-
-11.4 In the event that one or more of the provisions hereof were to
-conflict with a current or future applicable act or legislative text,
-said act or legislative text shall prevail, and the Parties shall make
-the necessary amendments so as to comply with said act or legislative
-text. All other provisions shall remain effective. Similarly, invalidity
-of a provision of the Agreement, for any reason whatsoever, shall not
-cause the Agreement as a whole to be invalid.
-
-
-      11.5 LANGUAGE
-
-The Agreement is drafted in both French and English and both versions
-are deemed authentic.
-
-
-    Article 12 - NEW VERSIONS OF THE AGREEMENT
-
-12.1 Any person is authorized to duplicate and distribute copies of this
-Agreement.
-
-12.2 So as to ensure coherence, the wording of this Agreement is
-protected and may only be modified by the authors of the License, who
-reserve the right to periodically publish updates or new versions of the
-Agreement, each with a separate number. These subsequent versions may
-address new issues encountered by Free Software.
-
-12.3 Any Software distributed under a given version of the Agreement may
-only be subsequently distributed under the same version of the Agreement
-or a subsequent version.
-
-
-    Article 13 - GOVERNING LAW AND JURISDICTION
-
-13.1 The Agreement is governed by French law. The Parties agree to
-endeavor to seek an amicable solution to any disagreements or disputes
-that may arise during the performance of the Agreement.
-
-13.2 Failing an amicable solution within two (2) months as from their
-occurrence, and unless emergency proceedings are necessary, the
-disagreements or disputes shall be referred to the Paris Courts having
-jurisdiction, by the more diligent Party.
-
-
-Version 1.0 dated 2006-09-05.

diff --git a/licenses/Forthon b/licenses/Forthon
deleted file mode 100644
index 2331703..0000000
--- a/licenses/Forthon
+++ /dev/null
@@ -1,32 +0,0 @@
-UCRL-CODE-155927
-
-This work was produced at the University of California, Lawrence
-Livermore National Laboratory (UC LLNL) under contract no. W-7405-ENG-48
-(Contract 48) between the U.S. Department of Energy (DOE) and The
-Regents of the University of California (University) for the operation
-of UC LLNL. The rights of the Federal Government are reserved under
-Contract 48 subject to the restrictions agreed upon by the DOE and
-University as allowed under DOE Acquisition Letter 97-1.  
-
-DISCLAIMER
-
-This work was prepared as an account of work sponsored by an agency of
-the United States Government. Neither the United States Government nor
-the University of California nor any of their employees, makes any
-warranty, express or implied, or assumes any liability or responsibility
-for the accuracy, completeness, or usefulness of any information,
-apparatus, product, or process disclosed, or represents that its use
-would not infringe privately-owned rights.  Reference herein to any
-specific commercial products, process, or service by trade name,
-trademark, manufacturer or otherwise does not necessarily constitute or
-imply its endorsement, recommendation, or favoring by the United States
-Government or the University of California. The views and opinions of
-authors expressed herein do not necessarily state or reflect those of
-the United States Government or the University of California, and shall
-not be used for advertising or product endorsement purposes.  
-
-NOTIFICATION OF COMMERCIAL USE
-
-Commercialization of this product is prohibited without notifying the
-Department of Energy (DOE) or Lawrence Livermore National Laboratory (LLNL).  
-

diff --git a/licenses/MolSoft b/licenses/MolSoft
deleted file mode 100644
index b43afd8..0000000
--- a/licenses/MolSoft
+++ /dev/null
@@ -1,111 +0,0 @@
-Molsoft LLC
-License Agreement Applicable to the Molsoft ICM Software Downloaded from the 
-MolSoft Web Site at www.molsoft.com
-
-IMPORTANT - READ CAREFULLY BEFORE INSTALLING SOFTWARE THE SOFTWARE YOU ARE ABOUT TO ACCESS CONTAINS PROGRAMS, DOCUMENTATION, AND OTHER PROPRIETARY MATERIAL ("SOFTWARE") THAT BELONGS TO MOLSOFT LLC.  POSSESSION AND USE OF THE SOFTWARE IS SUBJECT TO THIS SOFTWARE LICENSE AGREEMENT (THE "LICENSE"). BY CLICKING THE ACCEPT BUTTON YOU AND YOUR EMPLOYER (IF THE SOFTWARE IS BEING USED IN THE COURSE OF YOUR DUTIES OF EMPLOYMENT) REPRESENT AND WARRANT THAT:(A) YOU HAVE READ AND AGREE TO BE FULLY BOUND BY AND BECOME A PARTY TO THIS LICENSE; AND (B) YOU ARE NOT (1) A NATIONAL OR RESIDENT OF CUBA, LIBYA, IRAQ, IRAN, SUDAN, SYRIA, OR NORTH KOREA; (2) YOU ARE NOT THE U.S. TREASURY DEPARTMENT'S LIST OF SPECIALLY DESIGNATED NATIONALS, TERRORISTS, AND NARCOTICS TRAFFICKERS OR THE U.S. COMMERC DEPARTMENT'S TABLE OF DENY ORDERS OR THE U.S. STATE DEPARTMENT'S PROLIFERATION ENTITY LIST. (C) IN THE EVENT THAT YOU DO NOT AGREE TO ALL THE TERMS AND CONDITIONS OF THIS LICENSE, OR, IF YOU CANNOT WARRA
 NT THAT YOU ARE NOT IN VIOLATION OF (B) ABOVE, YOU ARE NOT AUTHORIZED TO INSTALL, USE OR POSSESS THE SOFTWARE AND MUST IMMEDIATELY CEASE TO INSTALL THE SOFTWARE.
-
-This Agreement has three parts.  Part I applies if you have NOT purchased a license to the accompanying software (the "Software").  Part II applies if you have purchased a license to the Software.  Part III applies to all license grants.  If you initially acquired a copy of the Software without purchasing a license and you wish to purchase a license, contact MolSoft L.L.C. ("Molsoft LLC") on the Internet at http://www.MolSoft.com or by email to info@...
-
-PART I -- TERMS APPLICABLE WHEN LICENSE FEES NOT (YET) PAID (LIMITED TO EVALUATION, EDUCATIONAL AND NON-PROFIT USES).
-
-Molsoft LLC grants you a non-exclusive license to use the Software free of charge if (a) you are a student, faculty member or staff member of an educational institution (K-12, junior college, college or library), a staff member of a religious organization, or an employee of an organization which meets Molsoft LLC's criteria for a charitable  non-profit organization; or (b) your use of the Software is for the purpose of evaluating whether to purchase an ongoing license to the Software.  The evaluation period for use by or on behalf of a commercial entity is limited to 14 days unless Molsoft's written consent is obtained. Evaluation use by others is not subject to the 14 day limit.  Government agencies (other than public libraries) are not considered educational, religious, or charitable non-profit organizations for purposes of this Agreement. If you are using the Software free of charge, you are not entitled to hard-copy documentation, support or telephone assistance.  If you
  fit within the description above, you may use the Software in the manner described in Part III below under "Scope of Grant."
-
-DISCLAIMER OF WARRANTY.
-
-Free of charge Software is provided on an "AS IS" basis, without warranty of any kind, including without limitation the warranties of merchantability, fitness for a particular purpose and non-infringement. The entire risk as to the quality and performance of the Software is borne by you.  Should the Software prove defective, you and not Molsoft LLC assume the entire cost of any service and repair. You must determine that the Software sufficiently meets your requirements. This disclaimer of warranty constitutes an essential part of the agreement. SOME JURISDICTIONS DO NOT ALLOW EXCLUSIONS OF AN IMPLIED WARRANTY, SO THIS DISCLAIMER MAY NOT APPLY TO YOU AND YOU MAY HAVE OTHER LEGAL RIGHTS THAT VARY BY JURISDICTION.
-
-PART II -- TERMS APPLICABLE WHEN LICENSE FEES PAID.
-
-GRANT. Subject to payment of applicable license fees, Molsoft LLC grants to you a limited, non-exclusive, non-transferable license to use the Software and accompanying documentation ("Documentation") in the manner described in Part III below under "Scope of Grant."
-
-LIMITED WARRANTY.
-
-Molsoft LLC warrants that for a period of ninety (90) days from the date of acquisition, the Software, if operated as directed, will substantially achieve the functionality described in the Documentation. Molsoft LLC does not warrant, however, that your use of the Software will be uninterrupted or that the operation of the Software will be error-free or secure.  You must determine that the Software sufficiently meets your requirements.  Molsoft LLC also warrants that the media containing the Software, if provided by Molsoft LLC, is free from defects in material and workmanship and will so remain for ninety (90) days from the date you acquired the Software. Molsoft LLC's sole liability for any breach of this warranty shall be, in Molsoft LLC's sole discretion: (i) to replace your defective media; or (ii) to advise you how to achieve substantially the same functionality with the Software as described in the Documentation through a procedure different from that set forth in the
  Documentation; or (iii) if the above remedies are impracticable, to refund the license fee you paid for the Software. Repaired, corrected, or replaced Software and Documentation shall be covered by this limited warranty for the period remaining under the warranty that covered the original Software, or if longer, for thirty (30) days after the date (a) of shipment to you of the repaired or replaced Software, or (b) Molsoft LLC advised you how to operate the Software so as to achieve the functionality described in the Documentation. Only if you inform Molsoft LLC of your problem with the Software during the applicable warranty period and provide evidence of the date you purchased a license to the Software will Molsoft LLC be obligated to honor this warranty. Molsoft LLC will use reasonable commercial efforts to repair, replace, advise, or, for individual consumers, refund pursuant to the foregoing warranty within 30 days of being so notified.
-
-THIS IS A LIMITED WARRANTY, AND IT IS THE ONLY WARRANTY MADE BY MOLSOFT LLC.  MOLSOFT LLC MAKES NO OTHER EXPRESS WARRANTY AND NO WARRANTY OF NONINFRINGEMENT OF THIRD PARTIES' RIGHTS. THE DURATION OF IMPLIED WARRANTIES, INCLUDING WITHOUT LIMITATION, WARRANTIES OF MERCHANTABILITY AND OF FITNESS FOR A PARTICULAR PURPOSE, IS LIMITED TO THE ABOVE LIMITED WARRANTY PERIOD; SOME JURISDICTIONS DO NOT ALLOW LIMITATIONS ON HOW LONG AN IMPLIED WARRANTY LASTS, SO LIMITATIONS MAY NOT APPLY TO YOU. NO MOLSOFT LLC DEALER, AGENT, OR EMPLOYEE IS AUTHORIZED TO MAKE ANY MODIFICATIONS, EXTENSIONS, OR ADDITIONS TO THIS WARRANTY. 
-
-If any modifications are made to the Software by you during the warranty period; if the media is subjected to accident, abuse, or improper use; or if you violate the terms of this Agreement, then this warranty shall immediately be terminated. This warranty shall not apply if the Software is used on or in conjunction with hardware or software other than the unmodified version of hardware and software with which the software was designed to be used as described in the Documentation.  THIS WARRANTY GIVES YOU SPECIFIC LEGAL RIGHTS, AND YOU MAY HAVE OTHER LEGAL RIGHTS THAT VARY BY JURISDICTION.
-
-PART III -- TERMS APPLICABLE TO ALL LICENSE GRANTS.
-
-SCOPE OF GRANT.
-
-You may:
-
-*	use the Software on any single computer;
-
-*	use the Software on a network, provided that each person accessing the Software through the network has a copy of the Software licensed to that person;
-
-*	use the Software on a second computer so long as only one copy is used at a time;
-
-*	copy the Software for archival purposes, provided any copy must contain all of 
-the original Software's proprietary notices; or
-
-*	if you have purchased a Pack of licenses for the Software (but not the Documentation), provided any copy must contain all of the original Software's proprietary notices.  The number of copies is the total number of copies that may be made for all platforms.  Additional copies of Documentation may be purchased.
-
-You may not:
-
-*	permit other individuals to use the Software except under the terms listed above;
-
-*	permit concurrent use of the Software;
-
-*	modify, translate, reverse engineer, decompile, disassemble (except to the extent applicable laws specifically prohibit such restriction), or create derivative works based on the Software;
-
-*	copy the Software other than as specified above;
-
-*	rent, lease, grant a security interest in, or otherwise transfer rights to the Software; 
-
-or
-
-*	remove any proprietary notices or labels on the Software.
-
-TITLE.
-
-Title, ownership rights, and intellectual property rights in the Software and Documentation shall remain in Molsoft LLC. The Software and Documentation are protected by copyright and other intellectual property laws and by international treaties. Title and related rights in the content accessed through the Software is the property of the applicable content owner and may be protected by applicable law. This License gives you no rights to such content. 
-
-TERMINATION.
-
-The license will terminate automatically if you fail to comply with the limitations described herein.  On termination, you must destroy all copies of the Software and Documentation.
-
-USE OF FREE LIBRARY.  
-
-Molsoft ICM Version 3.0 uses a free library called Qwt for building its executable.  The Qwt library is found in the ICM 3.0 file "qwt.dll" in the distribution and is available under the GNU Lesser General Public License, which is available at http://www.gnu.org/copyleft/lesser.html.  According to the terms of the GNU Lesser General Public License for the use of Qwt, Licensees are free to modify the source code for Qwt, which can be found at:
-
-http://sourceforge.net/projects/qwt.  
-
-You are free to modify the content of the Qwt library and recompile the library, but you are prohibited from changing the content of the definition file.  The following disclaimer applies to the Qwt library:
-
-This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version.  This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for more details.  You should have received a copy of the GNU Lesser General Public License along with this library; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
-
-Molsoft LLC hereby disclaims all copyright interest in the library "Qwt" (a library containing GUI components and utility classes) written by Josef Wilgen.  However, the remainder of ICM Version 3.0 is protected by Copyright (c) 1989-2002 Molsoft LLC.
-
-LICENSES INCLUDING THE MINI-XPDB OR THE XPDB DATABASE.
-
-Molsoft LLC's XPDB and the Mini-XPDB databases contain all known proteins annotated in a form designed for rapid and accurate use with Molsoft ICM Software. Molsoft XPDB and Mini-XPDB are derived from data freely available from the Protein Data Bank and found at www.rcsb.org/pdb.  Molsoft wishes to acknowledge the source of the PBD data files: H.M. Berman, J. Westbrook, Z. Feng, G. Gilliland, T.N. Bhat, H. Weissig, I.N. Shindyalov, P.E. Bourne: The Protein Data Bank. Nucleic Acids Research, 28 pp. 235-242 (2000). Users of Molsoft XPDB and Mini-XPDB should note that users assume all responsibility for insuring that intellectual property claims associated with any data set appearing in the Molosft XPDB are honored.  Molsoft's XPDB and Mini-XPDB data files do not contain any information on intellectual property claims with the exception in some cases of a reference for a patent involving the structure. Molsoft XPDB and Mini-XPDB files are provided on an "as is" basis, and Molso
 ft cannot be held liable to any party for direct, indirect, special, incidental, or consequential damages, including lost profits, arising from the use of the materials. The resources provided by Molsoft XPDB and Mini-XPDB are provided WITHOUT 
-
-WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED. THIS INCLUDES BUT IS NOT LIMITED TO MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE.  MOLSOFT LLC MAKES NO REPRESENTATION THAT ITS XPDB RESOURCES WILL NOT INFRINGE ANY PATENT OR OTHER PROPRIETARY RIGHT.
-
-EXPORT CONTROLS.
-
-None of the Software or underlying information or technology may be downloaded or otherwise exported or reexported (i) into (or to a national or resident of) Cuba, Iraq, Libya, Yugoslavia, North Korea, Iran, Syria or any other country to which the U.S. has embargoed goods; or (ii) to anyone on the U.S. Treasury Department's list of Specially Designated Nationals or the U.S. Commerce Department's Table of Denial Orders. By downloading or using the Software, you are agreeing to the foregoing and you are representing and warranting that you are not located in, under the control of, or a national or resident of any such country or on any such list.
-
-In addition, if the licensed Software is identified as a not-for-export product (for example, on the box, media or in the installation process), then the following applies: 
-
-EXCEPT FOR EXPORT TO CANADA FOR USE IN CANADA BY CANADIAN CITIZENS, THE SOFTWARE AND ANY UNDERLYING TECHNOLOGY MAY NOT BE EXPORTED OUTSIDE THE UNITED STATES OR TO ANY FOREIGN ENTITY OR "FOREIGN PERSON" AS DEFINED BY U.S. GOVERNMENT EGULATIONS, INCLUDING WITHOUT LIMITATION, ANYONE WHO IS NOT A CITIZEN, NATIONAL OR LAWFUL PERMANENT RESIDENT OF THE UNITED STATES.  BY DOWNLOADING OR USING THE SOFTWARE, YOU ARE AGREEING TO THE FOREGOING AND YOU ARE WARRANTING THAT YOU ARE NOT A "FOREIGN PERSON" OR UNDER THE CONTROL OF A FOREIGN PERSON.
-
-LIMITATION OF LIABILITY. 
-
-UNDER NO CIRCUMSTANCES AND UNDER NO LEGAL THEORY, TORT, CONTRACT, OR OTHERWISE, SHALL MOLSOFT LLC OR ITS SUPPLIERS OR RESELLERS BE LIABLE TO YOU OR ANY OTHER PERSON FOR ANY INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES OF ANY CHARACTER INCLUDING, WITHOUT LIMITATION, DAMAGES FOR LOSS OF GOODWILL, WORK STOPPAGE, COMPUTER FAILURE OR MALFUNCTION, OR ANY AND ALL OTHER COMMERCIAL DAMAGES OR LOSSES. IN NO EVENT WILL MOLSOFT LLC BE LIABLE FOR ANY DAMAGES IN EXCESS OF THE AMOUNT MOLSOFT LLC RECEIVED FROM YOU FOR A LICENSE TO THE SOFTWARE, EVEN IF MOLSOFT LLC SHALL HAVE BEEN INFORMED OF THE POSSIBILITY OF SUCH DAMAGES, OR FOR ANY CLAIM BY ANY OTHER PARTY. THIS LIMITATION OF LIABILITY SHALL NOT APPLY TO LIABILITY FOR DEATH OR PERSONAL INJURY TO THE EXTENT APPLICABLE LAW PROHIBITS SUCH LIMITATION. FURTHERMORE, SOME JURISDICTIONS DO NOT ALLOW THE EXCLUSION OR LIMITATION OF INCIDENTAL OR CONSEQUENTIAL DAMAGES, SO THIS LIMITATION AND EXCLUSION MAY NOT APPLY TO YOU.
-
-HIGH RISK ACTIVITIES.
-
-The Software is not fault-tolerant and is not designed, manufactured or intended for use or resale as on-line control equipment in hazardous environments requiring fail-safe performance, such as in the operation of nuclear facilities, aircraft navigation or communication systems, air traffic control, direct life support machines, or weapons systems, in which the failure of the Software could lead directly to death, personal injury, or severe physical or environmental damage ("High Risk Activities").  Molsoft LLC specifically disclaims any express or implied warranty of fitness for High Risk Activities.
-  
-MISCELLANEOUS.
-
-If the copy of the Software you received was accompanied by a printed or other form of a "hard-copy" Software License Agreement whose terms vary from this Agreement, then the hard-copy Software License Agreement governs your use of the Software.  This Agreement represents the complete agreement concerning this license and may be amended only by a writing executed by both parties.  THE ACCEPTANCE OF ANY PURCHASE ORDER PLACED BY YOU IS EXPRESSLY MADE CONDITIONAL ON YOUR ASSENT TO THE TERMS SET FORTH HEREIN AND NOT THOSE IN YOUR PURCHASE ORDER.  If any provision of this Agreement is held to be unenforceable, such provision shall be reformed only to the extent necessary to make it enforceable.  This Agreement shall be governed by California law (except for conflict of law provisions). The application the United Nations Convention of Contracts for the International Sale of Goods is expressly excluded.
-
-U.S. GOVERNMENT RESTRICTED RIGHTS.  
-
-Use, duplication or disclosure by the Government is subject to restrictions set forth in subparagraphs(a) through (d) of the Commercial Computer-Restricted Rights clause at FAR 52.227-19 when applicable, or in subparagraph (c)(1)(ii) of the Rights in Technical Data and Computer Software clause at DFARS 252.227-7013, or at 252.211-7015, or to Molsoft LLC's standard commercial license, as applicable, and in similar clauses in the NASA FAR Supplement. Contractor/manufacturer is Molsoft, L.L.C., 3366 No. Torrey Pines Ct., Ste. 300, La Jolla, CA  92037 USA.
-

diff --git a/licenses/Open-CASCADE-Technology-Public-License b/licenses/Open-CASCADE-Technology-Public-License
deleted file mode 100644
index 5829731..0000000
--- a/licenses/Open-CASCADE-Technology-Public-License
+++ /dev/null
@@ -1,143 +0,0 @@
-Public license
-  In short, Open CASCADE Technology Public License is LGPL-like with certain differences. You are permitted to use Open CASCADE Technology within commercial environments and you are obliged to acknowledge its use. You are also obliged to send your modifications of the original source code (if you have made any) to the Initial Developer (i.e. Open CASCADE S.A.S.). Complete text of the license is given below.
-
-  Open CASCADE Technology Public License
-Version 6.2 March, 2007 
- 
- Open CASCADE S.A.S. releases and makes publicly available the source code of the software Open CASCADE Technology to the free software development community under the terms and conditions of this 
- license. 
- 
- It is not the purpose of this license to induce you to infringe any patents or other property right claims or to contest validity of any such claims; this license has the sole purpose of protecting the integrity of the free software distribution system, which is implemented by public license practices. Many people have made generous contributions to the wide range of software distributed through that system in reliance on consistent application of that system; it is up to the author/donor to decide if he or she is willing to distribute software through any other system and a licensee cannot impose that choice. 
- 
- Please read this license carefully and completely before downloading this software. By downloading, using, modifying, distributing and sublicensing this software, you indicate your acceptance to be bound by the terms and conditions of this license. If you do not want to accept or cannot accept for any reasons the terms and conditions of this license, please do not download or use in any manner this software. 
- 
- 1. Definitions 
- 
- Unless there is something in the subject matter or in the context inconsistent therewith, the capitalized terms used in this License shall have the following meaning. 
- 
- "Applicable Intellectual Property Rights" means (a) with respect to the Initial Developer, any rights under patents or patents applications or other intellectual property rights that are now or hereafter acquired, owned by or assigned to the Initial Developer and that cover subject matter contained in the Original Code, but only to the extent necessary to use, reproduce, modify, distribute or sublicense the Original Code without infringement; and (b) with respect to You or any Contributor, any rights under patents or patents applications or other intellectual property rights that are now or hereafter acquired, owned by or assigned to You or to such Contributor and that cover subject matter contained in Your Modifications or in such Contributor's Modifications, taken alone or in combination with Original Code 
- 
- "Contributor" means each individual or legal entity that creates or contributes to the creation of any Modification, including the Initial Developer. 
- 
- "Derivative Program": means a new program combining the Software or portions thereof with other source code not governed by the terms of this License. 
- 
- "Initial Developer": means Open CASCADE S.A.S., with main offices at 15 bis, rue Ernest Renan 92136, Issy Les Moulineaux, France. 
- 
- "Modifications": mean any addition to, deletion from or change to the substance or the structure of the Software. When source code of the Software is released as a series of files, a Modification is: (a) any addition to, deletion from or change to the contents of a file containing the Software or (b) any new file or other representation of computer program statements that contains any part of the Software. By way of example, Modifications include any debug of, or improvement to, the Original Code or any of its components or portions as well as its next versions or releases thereof. 
- "Original Code": means (a) the source code of the software Open CASCADE Technology originally made available by the Initial Developer under this License, including the source code of any updates or upgrades of the Original Code and (b) the object code compiled from such source code and originally made available by Initial Developer under this License. 
- 
- "Software": means the Original Code, the Modifications, the combination of Original Code and any Modifications or any respective portions thereof. 
- 
- "You" or "Your": means an individual or a legal entity exercising rights under this License 
- 
- 2. Acceptance of license 
- 
- By using, reproducing, modifying, distributing or sublicensing the Software or any portion thereof, You expressly indicate Your acceptance of the terms and conditions of this License and undertake to act in accordance with all the provisions of this License applicable to You. 
- 
- 3. Scope and purpose 
- 
- This License applies to the Software and You may not use, reproduce, modify, distribute, sublicense or circulate the Software, or any portion thereof, except as expressly provided under this License. Any attempt to otherwise use, reproduce, modify, distribute or sublicense the Software is void and will automatically terminate Your rights under this License. 
- 
- 4. Contributor license 
- 
- Subject to the terms and conditions of this License, the Initial Developer and each of the Contributors hereby grant You a world-wide, royalty-free, irrevocable and non-exclusive license under the Applicable Intellectual Property Rights they own or control, to use, reproduce, modify, distribute and sublicense the Software provided that: 
- 
- You reproduce in all copies of the Software the copyright and other proprietary notices and disclaimers of the Initial Developer as they appear in the Original Code and attached hereto as Schedule "A" and any other notices or disclaimers attached to the Software and keep intact all notices in the Original Code that refer to this License and to the absence of any warranty; 
- 
- You include a copy of this License with every copy of the Software You distribute; 
- 
- If you distribute or sublicense the Software (as modified by You or on Your behalf as the case may be), You cause such Software to be licensed as a whole, at no charge, to all third parties, under the terms and conditions of the License, making in particular available to all third parties the source code of the Software;
- 
- You document all Your Modifications, indicate the date of each such Modifications, designate the version of the Software You used, prominently include a file carrying such information with respect to the Modifications and duplicate the copyright and other proprietary notices and disclaimers attached hereto as Schedule "B" or any other notices or disclaimers attached to the Software with your Modifications.
- 
- For greater certainty, it is expressly understood that You may freely create Derivative Programs (without any obligation to publish such Derivative Program) and distribute same as a single product. In such case, You must ensure that all the requirements of this License are fulfilled for the Software or any portion thereof.
- 
- 5. Your license 
- 
- You hereby grant all Contributors and anyone who becomes a party under this License a world-wide, non-exclusive, royalty-free and irrevocable license under the Applicable Intellectual Property Rights owned or controlled by You, to use, reproduce, modify, distribute and sublicense all Your Modifications under the terms and conditions of this License. 
- 
- 6. Software subject to license 
- 
- Your Modifications shall be governed by the terms and conditions of this License. You are not authorized to impose any other terms or conditions than those prevailing under this License when You distribute and/or sublicense the Software, save and except as permitted under Section 7 hereof. 
- 
- 7. Additional terms 
- 
- You may choose to offer, on a non-exclusive basis, and to charge a fee for any warranty, support, maintenance, liability obligations or other rights consistent with the scope of this License with respect to the Software (the "Additional Terms") to the recipients of the Software. However, You may do so only on Your own behalf and on Your sole and exclusive responsibility. You must obtain the recipient's agreement that any such Additional Terms are offered by You alone, and You hereby agree to indemnify, defend and hold the Initial Developer and any Contributor harmless for any liability incurred by or claims asserted against the Initial Developer or any Contributors with respect to any such Additional Terms. 
- 
- 8. Disclaimer of warranty 
- 
- The Software is provided under this License on an "as is" basis, without warranty of any kind, including without limitation, warranties that the Software is free of defects, merchantable, fit for a particular purpose or non-infringing. The entire risk as to the quality and performance of the Software is with You. 
- 
- 9. Liability 
- 
- Under no circumstances shall You, the Initial Developer or any Contributor be liable to any person for any direct or indirect damages of any kind including, without limitation, damages for loss of goodwill, loss of data, work stoppage, computer failure or malfunction or any and all other commercial damages or losses resulting from or relating to this License or indirectly to the use of the Software. 
- 
- 10. Trademark 
- 
- This License does not grant any rights to use the trademarks, trade names and domain names "MATRA", "EADS Matra Datavision", "CAS.CADE", "Open CASCADE", "opencascade.com" and "opencascade.org" or any other trademarks, trade names or domain names used or owned by the Initial Developer. 
- 
- 11. Copyright 
- 
- The Initial Developer retains all rights, title and interest in and to the Original Code. You may not remove the copyright © notice which appears when You download the Software. 
- 
- 12. Term 
- 
- This License is granted to You for a term equal to the remaining period of protection covered by the intellectual property rights applicable to the Original Code. 
- 
- 13. Termination 
- 
- In case of termination, as provided in Section 3 above, You agree to immediately stop any further use, reproduction, modification, distribution and sublicensing of the Software and to destroy all copies of the Software that are in Your possession or control. All sublicenses of the Software which have been properly granted prior to termination shall survive any termination of this License. In addition, Sections 5, 8 to 11, 13.2 and 15.2 of this License, in reason of their nature, shall survive the termination of this License for a period of fifteen (15) years. 
- 
- 14. Versions of the license 
- 
- The Initial Developer may publish new versions of this License from time to time. Once Original Code has been published under a particular version of this License, You may choose to continue to use it under the terms and conditions of that version or use the Original Code under the terms of any subsequent version of this License published by the Initial Developer. 
- 
- 15. Miscellaneous 
- 
- 15.1 Relationship of the Parties 
- 
- This License will not be construed as creating an agency, partnership, joint venture or any other form of legal association between You and the Initial Developer, and You will not represent to the contrary, whether expressly, by implication or otherwise. 
- 
- 15.2 Independent Development 
- 
- Nothing in this License will impair the Initial Developer's right to acquire, license, develop, have others develop for it, market or distribute technology or products that perform the same or similar functions as, or otherwise compete with, Modifications, Derivative Programs, technology or products that You may develop, produce, market or distribute. 
- 
- 15.3 Severability 
- 
- If for any reason a court of competent jurisdiction finds any provision of this License, or portion thereof, to be unenforceable, that provision of the License will be enforced to the maximum extent permissible so as to effect the economic benefits and intent of the parties, and the remainder of this License will continue in full force and extent. 
- 
- 
-END OF THE TERMS AND CONDITIONS 
- OF THIS LICENSE 
- 
- Open CASCADE S.A.S. is a French société par actions simplifiée having its registered head office at 31, avenue de la Baltique , 91954 Les Ulis Cedex, France and main offices at 15 bis, rue Ernest Renan 92136, Issy Les Moulineaux, France. Its web site is located at the following address www.opencascade.com 
- 
- 
-Open CASCADE Technology Public License 
- 
-Schedule "A"
- 
- The content of this file is subject to the Open CASCADE Technology Public License Version 6.2 (the "License"). You may not use the content of this file except in compliance with the License. Please obtain a copy of the License at http://www.opencascade.org and read it completely before using this file. 
- The Initial Developer of the Original Code is Open CASCADE S.A.S., with main offices at 15 bis, rue Ernest Renan 92136, Issy Les Moulineaux, France. The Original Code is copyright © Open CASCADE S.A.S., 2001. All rights reserved. 
- 
- "The Original Code and all software distributed under the License are distributed on an "AS IS" basis, without warranty of any kind, and the Initial Developer hereby disclaims all such warranties, including without limitation, any warranties of merchantability, fitness for a particular purpose or non-infringement.
- 
- Please see the License for the specific terms and conditions governing rights and limitations under the License". 
- 
- 
-End of Schedule "A" 
- 
- 
-Open CASCADE Technology Public License 
- 
-Schedule "B" 
- 
- "The content of this file is subject to the Open CASCADE Technology Public License Version 6.2 (the "License"). You may not use the content of this file except in compliance with the License. Please obtain a copy of the License at http://www.opencascade.org and read it completely before using this file. 
- The Initial Developer of the Original Code is Open CASCADE S.A.S., with main offices at 15 bis, rue Ernest Renan 92136, Issy Les Moulineaux, France. The Original Code is copyright © Open CASCADE S.A.S., 2001. All rights reserved. 
- 
- Modifications to the Original Code have been made by ________________________. Modifications are copyright © [Year to be included]. All rights reserved. 
- 
- The software Open CASCADE Technology and all software distributed under the License are distributed on an "AS IS" basis, without warranty of any kind, and the Initial Developer hereby disclaims all such warranties, including without limitation, any warranties of merchantability, fitness for a particular purpose or non-infringement. Please see the License for the specific terms and conditions governing rights and limitations under the License" 
- 
- 
-End of Schedule "B" 

diff --git a/licenses/aldor-2 b/licenses/aldor-2
deleted file mode 100644
index 6a2fb28..0000000
--- a/licenses/aldor-2
+++ /dev/null
@@ -1,49 +0,0 @@
-Aldor Public License 2.0
-
-Copyright (C) 1990-2007, Aldor Sofware Organization Ltd
-
-This Aldor distribution contains software and documentation, some in source
-form only, other in source and binary form.  Redistribution and use in source
-and binary forms, with or without modification, are permitted provided
-that the following conditions are met:
-
-* Redistributions of source code must retain the original copyright notice,
-  this list of conditions and the following disclaimer.
-
-* Redistributions in binary form must reproduce the original copyright notice,
-  this list of conditions and the following disclaimer in the documentation
-  and/or other materials provided with the distribution.
-
-* Neither the name of the Aldor Software Organization, Aldor.org
-  nor the names of its contributors may be used to endorse or promote products
-  derived from this software without specific prior written permission.
-
-* If you distribute a modified form of either source or binary code 
-  (a) you must make the source form of these modification available to the
-      Aldor Software Organization
-  (b) you grant the Aldor Software Organization a royalty-free license to use,
-      modify or redistribute your modifications without limitation, and
-  (c) you represent that you are legally entitled to grant these rights 
-      and that you are not providing the Aldor Software Organization with 
-      any code that violates any law or breaches any contract.
-
-* Your redistribution and use is on a non-commercial basis, meaning that no
-  payment is made in connection with it, whether directly (as in payment
-  for a copy of the software) or indirectly (as in payment for some
-  service related to the software, or payment for some product or
-  service that includes a copy of the software "without charge").
-
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
-"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
-LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
-A PARTICULAR PURPOSE ARE DISCLAIMED.  IN NO EVENT SHALL THE COPYRIGHT
-OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
-SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED
-TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
-PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
-LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
-NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
-SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-
-

diff --git a/licenses/amdlibm b/licenses/amdlibm
deleted file mode 100644
index 132be94..0000000
--- a/licenses/amdlibm
+++ /dev/null
@@ -1,112 +0,0 @@
-Advanced Micro Devices, Inc.
-Software License Agreement
-IMPORTANT—READ CAREFULLY: Do not load or use the Software until you have carefully read
-and agreed to the following terms and conditions. This is a legal agreement (“Agreement”)
-between you (either an individual or an entity) (“Licensee”) and Advanced Micro Devices, Inc.
-(“AMD”). If Licensee does not agree to the terms of this Agreement, do not install or use this
-software or any portion thereof. By loading or using the object code version only of the software
-obtained herewith, which may include associated install scripts and online or electronic
-documentation or any portion thereof, that is made available by AMD to download from any media
-(“Software”), Licensee agrees to all of the terms of this Agreement.
-1. LICENSE:
-a. Subject to the terms and conditions of this Agreement, AMD grants Licensee the
-following non-exclusive, non-transferable, royalty-free, limited copyright license to download,
-copy, use, distribute and sublicense the foregoing rights through multiple tiers of sublicenses the
-object code version of the Software and materials associated with this Agreement, including
-without limitation printed documentation, (collectively, “Materials”), provided that Licensee agrees
-to include all copyright legends and other legal notices that may appear in the Materials. The
-foregoing license is conditioned upon Licensee distributing the object code version of the
-Software only and under this software license agreement. Except for the limited license granted
-herein, Licensee shall have no other rights in the Materials, whether express, implied, arising by
-estoppel or otherwise.
-b. Except as expressly set forth in Section 1(a), Licensee does not have the right to (i)
-distribute, rent, lease, sell, sublicense, assign, or otherwise transfer the Materials, in whole or in
-part, to third parties for commercial or for non-commercial use; or (ii) modify, disassemble,
-reverse engineer, or decompile the Software, or otherwise reduce any part of the Software to any
-human readable form. All rights in and to the Materials not expressly granted to Licensee in this
-Agreement are reserved to AMD.
-2. FEEDBACK: Licensee may provide AMD feedback, suggestions or opinions as to the Software,
-its features, and desired enhancements or changes. If Licensee provides feedback, suggestions or
-opinions to AMD regarding any new features, use, functionality, or change to the Software or any
-materials related to the Software, Licensee hereby agrees to grant, and does grant, AMD all rights
-needed for AMD to incorporate, modify, distribute, use and commercialize any new feature, use,
-functionality, or change at no charge or encumbrance to AMD. Licensee agrees that AMD may disclose
-such feedback, suggestions or opinions to any third party in any manner, and Licensee agrees that AMD
-has the ability to sublicense any of the foregoing rights in any feedback, suggestions or opinions or AMD
-products or services in any form to any third party without restriction.
-3. OWNERSHIP AND COPYRIGHT OF MATERIALS: Licensee agrees that the Materials are
-owned by AMD and are protected by United States and foreign intellectual property laws (e.g. patent and
-copyright laws) and international treaty provisions. Licensee will not remove the copyright notice from the
-Materials. Licensee agrees to prevent any unauthorized copying of the Materials. All title and copyrights
-in and to the Materials, all copies thereof (in whole or in part, and in any form), and all rights therein shall
-remain vested in AMD. Except as expressly provided herein, AMD does not grant any express or implied
-right to Licensee under AMD patents, copyrights, trademarks, or trade secret information.
-4. WARRANTY DISCLAIMER: THE MATERIALS ARE PROVIDED “AS IS” WITHOUT ANY
-EXPRESS OR IMPLIED WARRANTY OF ANY KIND INCLUDING WARRANTIES OF
-MERCHANTABILITY, NONINFRINGEMENT OF THIRD-PARTY INTELLECTUAL PROPERTY, TITLE,
-OR FITNESS FOR ANY PARTICULAR PURPOSE, OR THOSE ARISING FROM CUSTOM OF TRADE
-OR COURSE OF USAGE. THE ENTIRE RISK ARISING OUT OF USE OR PERFORMANCE OF THE
-MATERIALS REMAINS WITH LICENSEE.
-AMD DOES NOT WARRANT, GUARANTEE, OR MAKE ANY REPRESENTATIONS AS TO THE
-CORRECTNESS, ACCURACY, COMPLETENESS, QUALITY, OR RELIABILITY OF THE MATERIALS.
-AMD DOES NOT WARRANT THAT OPERATION OF THE MATERIALS WILL BE UNINTERRUPTED
-OR ERROR-FREE. YOU ARE RESPONSIBLE FOR DETERMINING THE APPROPRIATENESS OF
-USING THE SOFTWARE AND ASSUME ALL RISKS ASSOCIATED WITH THE USE OF THE
-MATERIALS, INCLUDING BUT NOT LIMITED TO THE RISKS OF PROGRAM ERRORS, DAMAGE TO
-OR LOSS OF DATA, PROGRAMS OR EQUIPMENT, AND UNAVAILABILITY OR INTERRUPTION OF
-OPERATIONS. SOME JURISDICTIONS DO NOT ALLOW FOR THE EXCLUSION OR LIMITATION OF
-IMPLIED WARRANTIES, SO THE ABOVE LIMITATIONS OR EXCLUSIONS MAY NOT APPLY TO
-LICENSEE.
-5. LIMITATION OF LIABILITY: IN NO EVENT SHALL AMD OR ITS DIRECTORS, OFFICERS,
-EMPLOYEES AND AGENTS, ITS SUPPLIERS OR ITS LICENSORS BE LIABLE TO LICENSEE OR
-ANY THIRD PARTIES IN RECEIPT OF THE MATERIALS FOR CONSEQUENTIAL, INCIDENTAL,
-PUNITIVE OR SPECIAL DAMAGES, INCLUDING, BUT NOT LIMITED TO LOSS OF PROFITS,
-BUSINESS INTERRUPTION, OR LOSS OF INFORMATION ARISING OUT OF THE USE OF OR
-INABILITY TO USE THE MATERIALS, EVEN IF AMD HAS BEEN ADVISED OF THE POSSIBILITY OF
-SUCH DAMAGES. AMD DOES NOT ASSUME ANY RESPONSIBILITY TO SUPPORT OR UPDATE
-THE MATERIALS. BY USING THE MATERIALS WITHOUT CHARGE, YOU ACCEPT THIS
-ALLOCATION OF RISK. BECAUSE SOME JURSIDICTIONS PROHIBIT THE EXCLUSION OR
-LIMITATION OF LIABILITY FOR CONSEQUENTIAL OR INCIDENTAL DAMAGES, THE ABOVE
-LIMITATION MAY NOT APPLY TO LICENSEE.
-6. U.S. GOVERNMENT RESTRICTED RIGHTS: The Materials are provided with “RESTRICTED
-RIGHTS.” Use, duplication or disclosure by the Government is subject to restrictions as set forth in
-FAR52.227-14 and DFAR252.227-7013, et seq., or its successor. Use of the Materials by the
-Government constitutes acknowledgment of AMD’s proprietary rights in them.
-7. TERMINATION OF LICENSE: This Agreement will terminate immediately without notice from
-AMD or judicial resolution if Licensee fails to comply with any provisions of this Agreement. Upon
-termination of this Agreement, Licensee must delete or destroy all copies of the Materials.
-8. SUPPORT. Under this Agreement, AMD is under no obligation to assist in the use of the
-Materials, to provide support to licensees of the Materials, or to provide maintenance, correction,
-modification, enhancement, or upgrades to the Materials. If AMD determines, in its sole discretion, to
-support, maintain, correct, modify, enhance, or upgrade the Software, such support, maintenance,
-correction, modification, enhancement or upgrade shall be considered part of the Materials, and shall be
-subject to this Agreement.
-9. SURVIVAL: Sections 1(b), 2, 3, 4, 5, 6, and 8 through 14 shall survive any expiration or
-termination of this Agreement.
-10. APPLICABLE LAWS: Any claim arising under or relating to this Agreement shall be governed
-by and construed in accordance with the substantive laws of the State of California, without regard to
-principles of conflict of laws. Each party hereto submits to the jurisdiction of the state and federal courts
-of Santa Clara County and the Northern District of California for the purposes of all legal proceedings
-arising out of or relating to this Agreement or the subject matter hereof. Each party waives any objection
-which it may have to contest such forum.
-11. IMPORT/EXPORT/RE-EXPORT/USE/RELEASE/TRANSFER RESTRICTIONS AND
-COMPLIANCE WITH LAWS: Licensee is hereby provided notice, and agrees and acknowledges, that
-the Software, its source code, any accompanying media, material or information, and any product of the
-foregoing, may be subject to restrictions on use, release, transfer, importation, exportation and/or reexportation
-under the laws and regulations of the United States or other countries ("Applicable Laws"),
-which include but are not limited to U.S. export control laws such as the Export Administration
-Regulations and national security controls as defined thereunder, as well as State Department controls
-under the U.S. Munitions List. Licensee further agrees that the Software, its source code, any
-accompanying media, material or information, and any product of the foregoing, will not be used,
-released, transferred, imported, exported and/or re-exported in any manner prohibited under Applicable
-Laws, including U.S. export control laws regarding specifically designated persons, countries and
-nationals of countries subject to national security controls as provided in License Exception TSR of the
-Export Administration Regulations and any successor regulations.
-12. SEVERABILITY: Should any term of this Agreement be declared void or unenforceable by any
-court of competent jurisdiction, such declaration shall have no effect on the remaining terms hereof.
-13. NO WAIVER: The failure of either party to enforce any rights granted hereunder or to take action
-against the other party in the event of any breach hereunder shall not be deemed a waiver by that party
-as to subsequent enforcement of rights or subsequent actions in the event of future breaches.
-14. ENTIRE AGREEMENT: This Agreement constitutes the entire agreement between the parties
-and supersedes any prior or contemporaneous oral or written agreements with respect to the subject
-matter of this Agreement.

diff --git a/licenses/arb b/licenses/arb
deleted file mode 100644
index 9a7db07..0000000
--- a/licenses/arb
+++ /dev/null
@@ -1,302 +0,0 @@
-Copyrights
-
-ARB copyright and license information
-
-    COPYRIGHTS
-
-        The ARB software and documentation are not in the public
-        domain.
-
-        External programs distributed together with ARB are
-        copyrighted by and are the property of their respective
-        authors unless otherwise stated.
-
-        All other copyrights are owned by Lehrstuhl fuer
-        Mikrobiologie, TU Muenchen.
-
-    USAGE LICENSE
-
-        You have the right to use this version of ARB for free.
-        Please read as well the attached copyright notices below
-        whether you may or may not install this package.
-
-        Since many of the included programs is free software and
-        nobody is allowed to sell that software you may safely assume
-        ARB will never become a commercial product. 
-
-    REDISTRIBUTION LICENSE
-
-        This release of the ARB program and documentation may not be
-        sold or incorporated into a commercial product, in whole or in
-        part, without the expressed written consent of the Technical
-        University of Munich and of its supervisors Ralf Westram or
-        Wolfgang Ludwig.
-
-        All interested parties may redistribute and modify ARB as long
-        as all copies are accompanied by this license information and
-        all copyright notices remain intact.  Parties redistributing
-        ARB must do so on a non-profit basis, charging only for cost
-        of media or distribution.
-
-        If you modify parts of ARB and redistribute these changes the
-        'Lehrstuhl fuer Mikrobiologie' of the TU Muenchen gains the
-        right to incorporate these changes into ARB and to redistribute
-        them with future versions of ARB.
-
-    DEBIAN DISTRIBUTION
-
-        Hereby anybody is granted the right to build debian-pakets
-        of the ARB software package (http:://www.arb-home.de/) and
-        publish them on debian mirrors (or any other way of
-        debian-distribution). 
-
-        This includes any debian derivates like ubuntu. 
-
-        The ARB developers may (but most likely wont ever) revoke
-        this granting. If really done so, it'll only affect ARB
-        versions released after such a revocation.
-
-    DISCLAIMER
-
-        THE TU MUENCHEN AND THE VARIOUS AUTHORS OF ARB GIVE NO
-        WARRANTIES, EXPRESSED OR IMPLIED FOR THE SOFTWARE AND
-        DOCUMENTATION PROVIDED, INCLUDING, BUT NOT LIMITED TO WARRANTY
-        OF MERCHANTABILITY AND WARRANTY OF FITNESS FOR A PARTICULAR
-        PURPOSE.  User understands the software is a research tool for
-        which no warranties as to capabilities or accuracy are made,
-        and user accepts the software "as is." User assumes the entire
-        risk as to the results and performance of the software and
-        documentation. The above parties cannot be held liable for any
-        direct, indirect, consequential or incidental damages with
-        respect to any claim by user or any third party on account of,
-        or arising from the use of software and associated
-        materials. This disclaimer covers both the ARB core
-        applications and all external programs used by ARB.
-
-
-Copyright notices for programs distributes together with ARB
-
-    GDE
-
-        The Genetic Data Environment (GDE) software and documentation
-        are not in the public domain. Portions of this code are owned
-        and copyrighted by the The Board of Trustees of the University
-        of Illinois and by Steven Smith. External functions used by
-        GDE are the property of their authors. This release of the GDE
-        program and documentation may not be sold, or incorporated
-        into a commercial product, in whole or in part without the
-        expressed written consent of the University of Illinois and of
-        its author, Steven Smith.
-
-        All interested parties may redistribute the GDE as long as all
-        copies are accompanied by this documentation, and all
-        copyright notices remain intact.  Parties interested in
-        redistribution must do so on a non-profit basis, charging only
-        for cost of media.  Modifications to the GDE core editor
-        should be forwarded to the author Steven Smith.  External
-        programs used by the GDE are copyrighted by, and are the
-        property of their respective authors unless otherwise stated.
-
-
-
-    PHYLIP
-
-        (c) Copyright 1986-1993 by Joseph Felsenstein and the
-        University of Washington. Permission is granted to copy this
-        document provided that no fee is charged for it and that this
-        copyright notice is not removed.
-
-    LSADT
-
-        LEAST SQUARES ALGORITHM FOR FITTING ADDITIVE TREES TO
-        PROXIMITY DATA
-
-        GEERT DE SOETE  --  VERSION 1.01 - FEB. 1983
-                            VERSION 1.02 - JUNE 1983
-                            VERSION 1.03 - JULY 1983
-
-      - �C� version by Michael Macuikenas, University of Illinois
-
-        REFERENCE: DE SOETE, G. A LEAST SQUARES ALGORITHM FOR FITTING
-           ADDITIVE TREES TO PROXIMITY DATA. PSYCHOMETRIKA, 1983, 48,
-           621-626.
-           DE SOETE, G. ADDITIVE TREE REPRESENTATIONS OF INCOMPLETE
-           DISSIMILARITY DATA. QUALITY AND QUANTITY, 1984, 18,
-           387-393.
-
-      - REMARKS
-
-            ------
-
-        1) THE PROGRAM USES SUBROUTINES FROM THE PORT LIBRARY FOR
-           ERROR HANDLING, DYNAMIC STORAGE ALLOCATION AND SPECIFICA-
-           TION OF MACHINE-DEPENDENT CONSTANTS.
-           CF. FOX, P.A., HALL, A.D., & SCHRYER, N.L.
-
-            THE PORT MATHEMATICAL SUBROUTINE LIBRAY. ACM TRANS. ON MATH.
-            SOFTW., 1978, 4, 104-126.
-
-                 ALGORITHM 528. FRAMEWORK FOR A PORTABLE LIBRARY.
-                 ACM TRANS. ON MATH. SOFTW., 1978, 4, 177-188.
-        2) UNIFORMLY DISTRIBUTED RANDOM NUMBERS ARE GENERATED BY A
-           PROCEDURE DUE TO SCHRAGE. CF.
-           SCHRAGE, L.  A MORE PORTABLE FORTRAN RANDOM NUMBER GENERATOR.
-           ACM TRANS. ON MATH. SOFTW., 1979, 5, 132-138.
-        3) SUBROUTINES VA14AD AND VA14AC ARE ADAPTED FROM THE
-           HARWELL SUBROUTINE LIBRARY (1979 EDITION).
-        4) ALTHOUGH THIS PROGRAM HAS BEEN CAREFULLY TESTED, THE
-           AUTHOR DISCLAIMS ANY RESPONSABILITY FOR POSSIBLE
-           ERRORS.
-
-    BLAST
-
-        /* ===========================================================================
-        *
-        *                            PUBLIC DOMAIN NOTICE
-        *               National Center for Biotechnology Information
-        *
-        *  This software/database is a "United States Government Work" under the
-        *  terms of the United States Copyright Act.  It was written as part of
-        *  the author�s official duties as a United States Government employee and
-        *  thus cannot be copyrighted.  This software/database is freely available
-        *  to the public for use. The National Library of Medicine and the U.S.
-        *  Government have not placed any restriction on its use or reproduction.
-        *
-        *  Although all reasonable efforts have been taken to ensure the accuracy
-        *  and reliability of the software and data, the NLM and the U.S.
-        *  Government do not and cannot warrant the performance or results that
-        *  may be obtained by using this software or data. The NLM and the U.S.
-        *  Government disclaim all warranties, express or implied, including
-        *  warranties of performance, merchantability or fitness for any particular
-        *  purpose.
-        *
-        *  Please cite the author in any work or product based on this material.
-        *
-        * ===========================================================================*/
-        Warren Gish
-        NCBI/NLM
-
-    CONVERT_ALN
-
-        convert_aln --  an alignment(or sequence) converter written by Wen-Min Kuan
-                        for the Ribosomal Database Project(RDP), April 28, 1992.
-
-
-    fastdnaml
-
-        fastDNAml, a program for estimation of phylogenetic trees from
-        sequences. Copyright (C) 1998, 1999, 2000 by Gary J. Olsen
-
-        This program is free software; you may redistribute it and/or
-        modify it under the terms of the GNU General Public License as
-        published by the Free Software Foundation; either version 2 of
-        the License, or (at your option) any later version.
-
-        This program is distributed in the hope that it will be
-        useful, but WITHOUT ANY WARRANTY; without even the implied
-        warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
-        PURPOSE.  See the GNU General Public License for more details.
-
-        You should have received a copy of the GNU General Public License along
-        with this program; if not, write to the Free Software Foundation, Inc.,
-        59 Temple Place - Suite 330, Boston, MA  02111-1307, USA.
-
-        For any other enquiries write to Gary J. Olsen, Department of
-        Microbiology, University of Illinois, Urbana, IL 61801, USA
-
-        Or send E-mail to gary@...
-
-        fastDNAml is based in part on the program dnaml by Joseph Felsenstein.
-
-        Copyright notice from dnaml:
-
-            version 3.3. (c) Copyright 1986, 1990 by the University of
-            Washington and Joseph Felsenstein.  Written by Joseph
-            Felsenstein.  Permission is granted to copy and use this
-            program provided no fee is charged for it and provided
-            that this copyright notice is not removed.
-
-        When publishing work that based on results from fastDNAml please cite:
-
-            Felsenstein, J.  1981.  Evolutionary trees from DNA
-            sequences: A maximum likelihood approach.
-            J. Mol. Evol. 17: 368-376.
-
-            and
-
-            Olsen, G. J., Matsuda, H., Hagstrom, R., and Overbeek, R.
-            1994.  fastDNAml: A tool for construction of phylogenetic
-            trees of DNA sequences using maximum likelihood.
-            Comput. Appl. Biosci. 10: 41-48.
-
-
-    treepuzzle
-
-        treepuzzle is published under the GPL (GNU GENERAL PUBLIC LICENSE)
-        which is provided in 'lib/GPL.txt'.
-
-    molphy
-
-        MOLPHY: A Computer Program Package for Molecular Phylogenetics
-        
-        Readme
-               This is the MOLPHY (ProtML) distribution,  version 2.3.
-                Copyright (c) 1992-1996, Jun Adachi & Masami Hasegawa.
-                                 All rights reserved.
-        
-                MOLPHY is a program package for MOLecular PHYlogenetics.
-        
-        ProtML is a main program in MOLPHY for inferring evolutionary trees from
-        PROTein (amino acid) sequences by using the Maximum Likelihood method.
-        
-        Programs (C language)
-          ProtML: Maximum Likelihood Inference of Protein Phylogeny
-          NucML:  Maximum Likelihood Inference of Nucleic Acid Phylogeny
-          ProtST: Basic Statistics of Protein Sequences
-          NucST:  Basic Statistics of Nucleic Acid Sequences
-          NJdist: Neighbor Joining Phylogeny from Distance Matrix
-        Utilities (Perl)
-          mollist:  get identifiers list        molrev:   reverse DNA sequences
-          molcat:   concatenate sequences       molcut:   get partial sequences
-          molmerge: merge sequences             nuc2ptn:  DNA -> Amino acid
-          rminsdel: remove INS/DEL sites        molcodon: get specified codon sites
-          molinfo:  get varied sites            mol2mol:  MOLPHY format beautifer
-          inl2mol:  Interleaved -> MOLPHY       mol2inl:  MOLPHY -> Interleaved
-          mol2phy:  MOLPHY -> Sequential        phy2mol:  Sequential -> MOLPHY
-          must2mol: MUST -> MOLPHY              etc.
-        
-        MOLPHY is a free software, and you can use and redistribute it.
-        The programs are written in a standard subset of C with UNIX-like OS.
-        The utilities are written in the "Perl" (Ver.4.036) with UNIX-like OS.
-        MOLPHY has been tested on SUN4's (cc & gcc with SUN-OS 4.1.3) and
-        HP9000/700 (cc, c89 & gcc with HP-UX 9.05).
-        However, MOLPHY has NOT been tested on VAX, IBM-PC, and Macintosh.
-        
-        NETWORK DISTRIBUTION ONLY: The latest version of MOLPHY is always available
-        by anonymous ftp in ftp.ism.ac.jp: /pub/ISMLIB/MOLPHY/.
-
-    readseq
-
-
-         ReadSeq  -- 1 Feb 93
-         
-         Reads and writes nucleic/protein sequences in various
-         formats. Data files may have multiple sequences.
-         
-         Copyright 1990 by d.g.gilbert
-         biology dept., indiana university, bloomington, in 47405
-         e-mail: gilbertd@...
-         
-         This program may be freely copied and used by anyone.
-         Developers are encourged to incorporate parts in their
-         programs, rather than devise their own private sequence
-         format.
-         
-         This should compile and run with any ANSI C compiler.
-         Please advise me of any bugs, additions or corrections.
-
-
-
-
-
-

diff --git a/licenses/blat b/licenses/blat
deleted file mode 100644
index 1930d02..0000000
--- a/licenses/blat
+++ /dev/null
@@ -1,9 +0,0 @@
-CONTENTS AND COPYRIGHT
-
-This archive contains the entire source tree for Jim Kent's suite 
-of biological analysis and web display programs.  All files are
-copyrighted, but license is hereby granted for personal,
-academic, and non-profit use.  A license is also granted
-for the contents of the top level lib directory for commercial
-users.  Commercial users should contact jim_kent@... for 
-access to other modules.

diff --git a/licenses/cctbx-2.0 b/licenses/cctbx-2.0
deleted file mode 100644
index 51ef4c5..0000000
--- a/licenses/cctbx-2.0
+++ /dev/null
@@ -1,44 +0,0 @@
-*** License agreement ***
-
-cctbx Copyright (c) 2006, The Regents of the University of
-California, through Lawrence Berkeley National Laboratory (subject to
-receipt of any required approvals from the U.S. Dept. of Energy).  All
-rights reserved.
-
-Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions are met:
-
-(1) Redistributions of source code must retain the above copyright
-notice, this list of conditions and the following disclaimer.
-
-(2) Redistributions in binary form must reproduce the above copyright
-notice, this list of conditions and the following disclaimer in the
-documentation and/or other materials provided with the distribution.
-
-(3) Neither the name of the University of California, Lawrence Berkeley
-National Laboratory, U.S. Dept. of Energy nor the names of its
-contributors may be used to endorse or promote products derived from
-this software without specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS
-IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED
-TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A
-PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER
-OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
-EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
-PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
-PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
-LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
-NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
-SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-
-You are under no obligation whatsoever to provide any bug fixes,
-patches, or upgrades to the features, functionality or performance of
-the source code ("Enhancements") to anyone; however, if you choose to
-make your Enhancements available either publicly, or directly to
-Lawrence Berkeley National Laboratory, without imposing a separate
-written license agreement for such Enhancements, then you hereby grant
-the following license: a  non-exclusive, royalty-free perpetual license
-to install, use, modify, prepare derivative works, incorporate into
-other computer software, distribute, and sublicense such enhancements or
-derivative works thereof, in binary and source code form.

diff --git a/licenses/dssp b/licenses/dssp
deleted file mode 100644
index 3bd94e1..0000000
--- a/licenses/dssp
+++ /dev/null
@@ -1,39 +0,0 @@
-An academic license for the DSSP program
-((c) W. Kabsch, C. Sander and MPI-MF, 1983, 1985, 1988)
-is granted to in exchange for the following commitments:
- 
-I hereby certify that
- 
-        (1) I am an academic user at an academic research institution. In
-            using the software, I will respect the interests of the authors
-            and their institutions.
- 
-        (2) I will not use the software in commercial activities without
-            a written commercial license agreement; commercial activities
-            include, in particular, work under contract from a commercial
-            company.
- 
-        (3) I will not redistribute the software to others outside of my
-            immediate research group. I will suggest to other interested
-            research groups to contact the authors directly.
- 
-        (4) I will not alter or suppress the run-time copyright message.
-
-        (5) I will acknowledge the program authors on any publication of
-            scientific results based in part on use of the program and
-            cite the article in which the program was described.
- 
-        (6) I will report evidence of program bugs to the authors.
- 
-        (7) I will send the source code of any bug corrections and program
-            extensions, major or minor, to the original authors, for free
-            academic use. If I have made major extensions which are incor-
-            porated by the authors, I reserve the right to be appropriately
-            included in any future commercial license agreement.
- 
-        (8) I will not extract part of the software, e.g. modules or sub-
-            routines, for use in other contexts without permission by the
-            authors.
- 
-        (9) I will not use the program in the context of classified research.
-

diff --git a/licenses/eGenixPublic-1.0 b/licenses/eGenixPublic-1.0
deleted file mode 100644
index 845422d..0000000
--- a/licenses/eGenixPublic-1.0
+++ /dev/null
@@ -1,86 +0,0 @@
-EGENIX.COM PUBLIC LICENSE AGREEMENT VERSION 1.0.0
-
-1. Introduction
-
-This "License Agreement" is between eGenix.com Software, Skills and Services
-GmbH ("eGenix.com"), having an office at Pastor-Loeh-Str. 48, D-40764
-Langenfeld, Germany, and the Individual or Organization ("Licensee") accessing
-and otherwise using this software in source or binary form and its associated
-documentation ("the Software").
-
-
-2. License
-
-Subject to the terms and conditions of this eGenix.com Public License Agreement,
-eGenix.com hereby grants Licensee a non-exclusive, royalty-free, world-wide
-license to reproduce, analyze, test, perform and/or display publicly, prepare
-derivative works, distribute, and otherwise use the Software alone or in any
-derivative version, provided, however, that the eGenix.com Public License
-Agreement is retained in the Software, or in any derivative version of the
-Software prepared by Licensee.
-
-
-3. NO WARRANTY
-
-eGenix.com is making the Software available to Licensee on an "AS IS" basis.
-SUBJECT TO ANY STATUTORY WARRANTIES WHICH CAN NOT BE EXCLUDED, EGENIX.COM MAKES
-NO REPRESENTATIONS OR WARRANTIES, EXPRESS OR IMPLIED. BY WAY OF EXAMPLE, BUT NOT
-LIMITATION, EGENIX.COM MAKES NO AND DISCLAIMS ANY REPRESENTATION OR WARRANTY OF
-MERCHANTABILITY OR FITNESS FOR ANY PARTICULAR PURPOSE OR THAT THE USE OF THE
-SOFTWARE WILL NOT INFRINGE ANY THIRD PARTY RIGHTS.
-
-
-4. LIMITATION OF LIABILITY
-
-EGENIX.COM SHALL NOT BE LIABLE TO LICENSEE OR ANY OTHER USERS OF THE SOFTWARE
-FOR ANY INCIDENTAL, SPECIAL, OR CONSEQUENTIAL DAMAGES OR LOSS (INCLUDING,
-WITHOUT LIMITATION, DAMAGES FOR LOSS OF BUSINESS PROFITS, BUSINESS INTERRUPTION,
-LOSS OF BUSINESS INFORMATION, OR OTHER PECUNIARY LOSS) AS A RESULT OF USING,
-MODIFYING OR DISTRIBUTING THE SOFTWARE, OR ANY DERIVATIVE THEREOF, EVEN IF
-ADVISED OF THE POSSIBILITY THEREOF.
-
-SOME JURISDICTIONS DO NOT ALLOW THE EXCLUSION OR LIMITATION OF INCIDENTAL OR
-CONSEQUENTIAL DAMAGES, SO THE ABOVE EXCLUSION OR LIMITATION MAY NOT APPLY TO
-LICENSEE.
-
-
-5. Termination
-
-This License Agreement will automatically terminate upon a material breach of
-its terms and conditions.
-
-
-6. General
-
-Nothing in this License Agreement affects any statutory rights of consumers that
-cannot be waived or limited by contract.
-
-Nothing in this License Agreement shall be deemed to create any relationship of
-agency, partnership, or joint venture between eGenix.com and Licensee.
-
-If any provision of this License Agreement shall be unlawful, void, or for any
-reason unenforceable, such provision shall be modified to the extent necessary
-to render it enforceable without losing its intent, or, if no such modification
-is possible, be severed from this License Agreement and shall not affect the
-validity and enforceability of the remaining provisions of this License
-Agreement.
-
-This License Agreement shall be governed by and interpreted in all respects by
-the law of Germany, excluding conflict of law provisions. It shall not be
-governed by the United Nations Convention on Contracts for International Sale of
-Goods.
-
-This License Agreement does not grant permission to use eGenix.com trademarks or
-trade names in a trademark sense to endorse or promote products or services of
-Licensee, or any third party.
-
-The controlling language of this License Agreement is English. If Licensee has
-received a translation into another language, it has been provided for
-Licensee's convenience only.
-
-
-7. Agreement
-
-By downloading, copying, installing or otherwise using the Software, Licensee
-agrees to be bound by the terms and conditions of this License Agreement.
-

diff --git a/licenses/fasta b/licenses/fasta
deleted file mode 100644
index 30982d8..0000000
--- a/licenses/fasta
+++ /dev/null
@@ -1,26 +0,0 @@
-     Copyright 1988, 1991, 1992, 1993, 1994 1995, by William
-     R. Pearson and the University of Virginia.  All rights
-     reserved. The FASTA program and documentation may not be sold or
-     incorporated into a commercial product, in whole or in part,
-     without written consent of William R. Pearson and the University
-     of Virginia.  For further information regarding permission for
-     use or reproduction, please contact:
-
-	     David Hudson
-	     Assistant Provost for Research
-	     University of Virginia
-	     P.O. Box 400301
-	     Charlottesville, VA  22906-9025
-
-	     (434) 924-3606
-
-     Code in the smith_waterman_sse2.c and smith_waterman_sse2.h files
-     is copyright (c) 2006 by Michael Farrar.
-
-     This program may not be sold or incorporated into a commercial
-     product, in whole or in part, without written consent of Michael
-     Farrar.  For further information regarding permission for use or
-     reproduction, please contact: Michael Farrar at
-     farrar.michael@...
-
-

diff --git a/licenses/gmap b/licenses/gmap
deleted file mode 100644
index 552d318..0000000
--- a/licenses/gmap
+++ /dev/null
@@ -1,36 +0,0 @@
-Copyright (c) 2005 Genentech, Inc.  All rights reserved.
-
-The Developers of this software are Thomas D. Wu <twu@...> and
-Colin K. Watanabe <ckw@...>.
-
-Permission is hereby granted, free of charge, to any person obtaining
-a copy of this software and associated documentation files (the
-"Package"), to use, copy, and distribute copies of the Package,
-without modifications, provided that the above copyright notice and
-this permission notice are included in all copies or substantial
-portions of the Package.  Distribution of this Package as part of a
-commercial software product requires prior arrangement with the
-Developers.
-
-Permission is also hereby granted, free of charge, to any person
-obtaining a copy of this Package, to modify your copy or copies of the
-Package or any portion of it, provided that you use the modified
-Package only within your corporation or organization.  Distribution of
-a modified version of this Package requires prior arrangement with the
-Developers.
-
-Genome databases, map files, and other result files produced as output
-from software in this Package do not automatically fall under the
-copyright of this Package, but belong to whoever generated them, and
-may be distributed freely.
-
-IN NO EVENT SHALL GENENTECH, INC. BE LIABLE TO ANY PARTY FOR DIRECT,
-INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES, OR OTHER
-LIABILITY, INCLUDING LOST PROFITS, ARISING FROM THE USE OF THIS
-SOFTWARE.
-
-THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
-EXPRESS OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
-WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
-GENENTECH, INC. HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT,
-UPDATES, ENHANCEMENTS, OR MODIFICATIONS.

diff --git a/licenses/oasis b/licenses/oasis
deleted file mode 100644
index 3069782..0000000
--- a/licenses/oasis
+++ /dev/null
@@ -1,56 +0,0 @@
-          LICENSE of VEC, SAPI, DIMS and Associated Programs
-
-COPYRIGHT NOTICE:
-
-Copyright (c) 1985-2002, 
-              Research group on Methods of Solving Crystal Structures, 
-              Institute of Physics, Chinese Academy of Sciences. 
-              All rights reserved.
-Authors: 
-         VEC
-             Wan Zheng-hua, Liu Yu-dong, Fu Zheng-qing, Li Yang, 
-             Cheng Ting-zhu, Li Fang-hua & Fan Hai-fu
-         SAPI
-             Zheng Chao-de, Gu Yuan-xin, Wan Zheng-hua, Yao Jia-xing &
-             Fan Hai-fu
-         DIMS
-             Fu Zheng-qing, Li Yang, Liu Yu-dong & Fan Hai-fu           
-
-LICENSE AGREEMENT:
-
-In consideration of being allowed to copy and/or use this software,
-the user agrees to be bound by the terms and conditions of this License
-Agreement as "Licensee."  This Agreement gives you, the LICENSEE,
-certain rights and obligations.  By using the software, you indicate
-that you have read, understood, and will comply with the following
-terms and conditions.
-
-Permission is hereby granted to use or copy these programs for academic
-purpose, provided the text of this NOTICE (to include COPYRIGHT
-NOTICE, LICENSE AGREEMENT, and DISCLAIMER) is retained with all
-copies.  Permission to modify the code and to distribute modified code
-is granted, provided the text of this NOTICE is retained, a notice
-that the code was modified is included with the above COPYRIGHT NOTICE
-and with the COPYRIGHT NOTICE in any modified files, and that this
-file ("LICENSE") is distributed with the modified code.
-
-Title to copyright to this software and its derivatives and to any
-associated documentation shall at all times remain with Licensor and
-LICENSEE agrees to preserve the same.  Nothing in this Agreement shall
-be construed as conferring rights to use in advertising, publicity or
-otherwise any trademark of the name of the Institute of Physics, Chinese
-Academy of Sciences.
-
-DISCLAIMER:
-
-THIS SOFTWARE IS PROVIDED BY THE AUTHORS "AS IS" AND ANY EXPRESS OR 
-IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES 
-OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.  
-IN NO EVENT SHALL THE AUTHORS BE LIABLE FOR ANY DIRECT, INDIRECT, 
-INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT 
-NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, 
-DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY 
-THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT 
-(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF 
-THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-

diff --git a/licenses/procheck b/licenses/procheck
deleted file mode 100644
index 793379c..0000000
--- a/licenses/procheck
+++ /dev/null
@@ -1,230 +0,0 @@
-
-
-	  PROCHECK - Stereochemical Quality of Protein Structures
-          -------------------------------------------------------
-			and AQUA for PROCHECK-NMR
-                        -------------------------
-
-			CONFIDENTIALITY AGREEMENT
-			-------------------------
-
-
-
-In regard to the PROCHECK suite of programs, specified in Appendix 1
-herewith and the AQUA suite of programs specified in Appendix 2 herewith
-(the Software) supplied to us, the copyright and other intellectual
-property rights to which belong to the authors, we
-
-    __________________________________________________________________
-
-undertake to the authors that we shall be bound by the following terms and
-conditions:-
-
-1. We will receive the Software and any related documentation in confidence
-and will not use the same except for the purpose of the department's own 
-research. The Software will be used only by such of our officers or
-employees to whom it must reasonably be communicated to enable us to
-undertake our research and who agree to be bound by the same confidence.
-The department shall procure and enforce such agreement from its staff for
-the benefit of the authors.
-
-2. The publication of research using the Software must reference
-
-   "Laskowski R A, MacArthur M W, Moss D S & Thornton J M (1993). PROCHECK:
-   a program to check the stereochemical quality of protein
-   structures. J. Appl.  Cryst., 26, 283-291."
-
-and
-
-   "Rullmann J A C (1996). AQUA, Computer Program, Department of NMR
-   Spectroscopy, Bijvoet Center for Biomolecular Research, Utrecht
-   University, The Netherlands."
-
-
-3. Research shall take place solely at the department's premises at
-
-    __________________________________________________________________
-
-4. All forms of the Software will be kept in a reasonably secure place to
-prevent unauthorised access.
-
-5. Each copy of the Software or, if not practicable then, any package
-associated therewith shall be suitably marked (and such marking maintained) 
-with the following copyright notice: " Copyright 1992 M W MacArthur, R A
-Laskowski, D S Moss, J A C Rullmann & J M Thornton All Rights Reserved".
-
-6. The Software may be modified but any changes made shall be made
-available to the authors.
-
-7. The Software shall be used exclusively for academic teaching and
-research. The Software will not be used for any commercial research or
-research associated with an industrial company.
-
-8. The confidentiality obligation in paragraph one shall not apply:
-
-   (i)  to information and data known to the department at the time of
-	receipt hereunder (as evidenced by its written records);
-
-  (ii)	to information and data which was at the time of receipt in the 
-	public domain or thereafter becomes so through no wrongful act of
-	the department;
-
- (iii)	to information and data which the department receives from a third
-	party not in breach of any obligation of confidentiality owed to
-	the authors.
-
-
-
-Please sign this Undertaking and return a copy of it to indicate that you 
-have read, understood and accepted the above terms.
-
-
-
-		      For and on behalf of _____________________________
-
-		      _________________________________________________
-		     
-		      ..................................................
-
-		      Dated ............................................
-
-
-
-
-APPENDIX 1 - DETAILS OF THE PROCHECK SUITE OF PROGRAMS PROVIDED (v.3.4.3)
----------------------------------------------------------------
-
-Files to be included
---------------------
-
-         1. anglen.f            }
-         2. anglen.inc          }
-         3. bplot.f             }
-         4. bplot.inc           }
-         5. brkcln.par          }
-         6. clean.f             }
-         7. gfac2pdb.f          }
-         8. gfac2pdb.inc        }
-         9. mplot.f             }
-        10. mplot.inc           } Source program files
-        11. nb.c                }
-        12. pplot.f             }
-        13. pplot.inc           }
-        14. ps.f                }
-        15. rmsdev.f            }
-        16. rmsdev.inc          }
-        17. secstr.f            }
-        18. sstruc.par          }
-        19. tplot.f             }
-        20. tplot.inc           }
-        21. viol2pdb.f          }
-        22. viol2pdb.inc        }
-        23. vplot.f             }
-        24. vplot.inc           }
-        25. gfac2pdb.scr        }
-        26. procheck.com      }
-        27. procheck.scr      }
-        28. procheck_comp.com }
-        29. procheck_comp.scr }
-        30. procheck_nmr.scr  }
-        31. proplot.com       }
-        32. proplot.scr       } Script files
-        33. proplot_comp.scr  }
-        34. proplot_nmr.scr   }
-        35. proplot_comp.com  }
-        36. prosub.com        }
-        37. setup.com         }
-        38. setup.scr         }
-        39. viol2pdb.scr      }
-        40. convax.for         }
-        41. procomp.com        } Installation files
-        42. procomp.scr        }
-        43. maninst.ps       }
-        44. manual.tar.Z     } Documentation files
-        45. nmr_manual.tar.Z }
-        46. procheck.dat       }
-        47. procheck.prm       } Data
-        48. procheck_comp.prm  } files
-        49. procheck_nmr.prm   }
-
-
-APPENDIX 2 - DETAILS OF THE AQUA SUITE OF PROGRAMS PROVIDED (v.0.40)
------------------------------------------------------------
-
-Files to be included
---------------------
-
-Source files:-
-------------
-
-AquaCalc.c            AquaCalc.h
-                      AquaData.h
-AquaDist.c            AquaDist.h    
-AquaFiles.c           AquaFiles.h     
-AquaFuncts.c          AquaFuncts.h      
-AquaFuncts_biosym.c   AquaFuncts_biosym.h             
-AquaFuncts_cv.c       AquaFuncts_cv.h         
-AquaFuncts_io.c       AquaFuncts_io.h         
-AquaFuncts_pdb.c      AquaFuncts_pdb.h          
-AquaFuncts_pdbmr.c    AquaFuncts_pdbmr.h            
-AquaHow.c             AquaHow.h
-                      AquaMacros.h   
-AquaPseudo.c          AquaPseudo.h      
-AquaStrucset.c        AquaStrucset.h
-                      AquaTypes.h        
-AquaWhat.c            AquaWhat.h    
-Qext.c                Qext.h
-Range.c               Range.h
-                      cv_subs.h 
-
-Script files:-
-------------
-ReadNrv.pm*           convDIANAtorsrestr    qdbext*
-aqdrst*               convDISGEOdistrestr   qguessc*
-aqpc*                 convDISGEOtorsrestr   qguessr*
-aqpcsel               convMRTABLE           qhelp*
-aquanal.pl*           convXPLORdistrestr    qmodr*
-clean0*               convXPLORtorsrestr    qsplitr*
-convBIOSYMdistrestr   makecmm*              qsumm*
-convBIOSYMtorsrestr   qconvert*             qsumm_aux1*
-convDIANAdistrestr    qconvr*               qsumm_aux2*
-
-Documentation:-
--------------
-README                 models.txt             qconvr.txt
-aqpc.txt               mr.txt                 qdbext.txt
-aqua_setup.txt         names.txt              qext.txt
-biosym.txt             overview.txt           qhelp.txt
-chains.txt             perl.txt               qsumm.txt
-conversion.txt         procheck.txt           restraint_format.txt
-dbas.txt               qanal.txt              setup.txt
-intro.txt              qclean.txt             torsion.txt
-log.txt                qconvert.txt           xplor.txt
-
-Extras:-
-------
-joinpdb*               splitpdb*
-
-
-
-Please complete the above form, sign it, and then send or fax to:-
-
-
-Roman Laskowski
-European Bioinformatics Institute,
-Wellcome Trust Genome Campus,
-Hinxton,
-Cambridge, CB10 1SD,
-United Kingdom
- 
-Fax:- +44 (0)1223 494 468
-
-If you have any problems either installing the software or running it,
-please e-mail your problems to:-
-
-    roman@...
-
-Questions about AQUA should be directed to Ton Rullmann at
-
-      rull@...
-

diff --git a/licenses/psipred b/licenses/psipred
deleted file mode 100644
index dd5346f..0000000
--- a/licenses/psipred
+++ /dev/null
@@ -1,82 +0,0 @@
- PSIPRED2 - PROTEIN SECONDARY STRUCTURE PREDICTION PROGRAM BY D.T.JONES
- ----------------------------------------------------------------------
-
-                          GENERAL LICENSE &
-                          -----------------
-
-		     CONFIDENTIALITY AGREEMENT
-		     -------------------------
-
-
-
-In regard to the protein structure prediction program (PSIPRED2)
-herewith (the Software) the copyright and other intellectual property
-rights to which belong to the Author(s).
-
-Any user (the User) of the program undertakes to the Copyright holder that he
-or she shall be bound by the following terms and conditions:-
-
-1. The User will receive the Software and any related documentation in
-confidence and will not use the same except for the purpose of their own 
-research. The Software will be used only by such of the User's officers or
-employees to whom it must reasonably be communicated to enable them to
-undertake their research and who agree to be bound by the same confidence.
-The User shall procure and enforce such agreement from his or her staff for
-the benefit of the Copyright holder.
-
-2. The publication of research using the Software must include an
-appropriate citation to the method:
-
-Jones, D.T. (1999) Protein secondary structure prediction based on
-position-specific scoring matrices. J. Mol. Biol. 292:195-202.
-
-3. All forms of the Software will be kept in a reasonably secure place to
-prevent unauthorised access.
-
-4. Each copy of the Software or, if not practicable then, any package
-associated therewith shall be suitably marked (and such marking maintained) 
-with the following copyright notice: "Copyright 2000 D.T.Jones. All Rights
-Reserved.".
-
-5. The Software may be modified, but any changes made shall be communicated
-to the Author(s) and made freely available. Any modified version of The Software
-will remain subject to the terms of this license.
-
-6. The Software may not be sold as a standalone package, or incorporated into
-a commercial software package without the written permission of the Copyright
-holder. The Software may be used freely for individual academic or commercial
-research. The Software may also be made freely available for training or
-teaching purposes.
-
-7. The results produced by the Software may not be incorporated into any
-data banks or databases which are subject to the payment of access or
-license fees without the written permission of the Copyright holder.
-
-8. The Software may be made available to users over a local network or
-wide area network (including the Internet), but only if access is granted
-free of charge to all authorised users. Incorporation of the Software into
-a commercial Web site or other fee paying service is not allowed without
-the written permission of the Copyright holder. If PSIPRED results are
-returned to the user via such a network service, then a suitable
-acknowledgement of the PSIPRED method must be returned somewhere in the
-output text.
-
-9. The confidentiality obligation in paragraph one shall not apply:
-
-   (i)  to information and data known to the User at the time of
-	receipt hereunder (as evidenced by its written records);
-
-  (ii)	to information and data which was at the time of receipt in the 
-	public domain or thereafter becomes so through no wrongful act of
-	the User;
-
- (iii)	to information and data which the User receives from a third
-	party not in breach of any obligation of confidentiality owed to
-	the Author(s).
-
-10. The User understands that the Software is supplied "as is". No warranty
-   as to its fitness or suitability for any purpose whatsoever is made or
-   implied. In no event shall the Author(s) or Copyright holder be held
-   responsible for any direct or indirect damages arising through the use
-   of the Software.
-

diff --git a/licenses/scalasca b/licenses/scalasca
deleted file mode 100644
index 519cf2c..0000000
--- a/licenses/scalasca
+++ /dev/null
@@ -1,35 +0,0 @@
-Copyright (c) 1998-2008, Forschungszentrum Juelich GmbH, Federal
-Republic of Germany
-
-Copyright (c) 2003-2008, University of Tennessee, Knoxville, United
-States of America
-
-All rights reserved.
-
-Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions are
-met:
-
-* Redistributions of source code must retain the above copyright
-  notice, this list of conditions and the following disclaimer.
-
-* Redistributions in binary form must reproduce the above copyright
-  notice, this list of conditions and the following disclaimer in the
-  documentation and/or other materials provided with the distribution.
-
-* Neither the names of Forschungszentrum Juelich GmbH or the University
-  of Tennessee, Knoxville, nor the names of their contributors may be
-  used to endorse or promote products derived from this software
-  without specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
-"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
-LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
-A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
-OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
-SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
-LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
-DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
-THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
-(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
-OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

diff --git a/licenses/tktreectrl b/licenses/tktreectrl
deleted file mode 100644
index f08986d..0000000
--- a/licenses/tktreectrl
+++ /dev/null
@@ -1,38 +0,0 @@
-This software is copyrighted by Tim Baker and other parties.  The
-following terms apply to all files associated with the software unless
-explicitly disclaimed in individual files.
-
-The authors hereby grant permission to use, copy, modify, distribute,
-and license this software and its documentation for any purpose, provided
-that existing copyright notices are retained in all copies and that this
-notice is included verbatim in any distributions. No written agreement,
-license, or royalty fee is required for any of the authorized uses.
-Modifications to this software may be copyrighted by their authors
-and need not follow the licensing terms described here, provided that
-the new terms are clearly indicated on the first page of each file where
-they apply.
-
-IN NO EVENT SHALL THE AUTHORS OR DISTRIBUTORS BE LIABLE TO ANY PARTY
-FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES
-ARISING OUT OF THE USE OF THIS SOFTWARE, ITS DOCUMENTATION, OR ANY
-DERIVATIVES THEREOF, EVEN IF THE AUTHORS HAVE BEEN ADVISED OF THE
-POSSIBILITY OF SUCH DAMAGE.
-
-THE AUTHORS AND DISTRIBUTORS SPECIFICALLY DISCLAIM ANY WARRANTIES,
-INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY,
-FITNESS FOR A PARTICULAR PURPOSE, AND NON-INFRINGEMENT.  THIS SOFTWARE
-IS PROVIDED ON AN "AS IS" BASIS, AND THE AUTHORS AND DISTRIBUTORS HAVE
-NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS, OR
-MODIFICATIONS.
-
-GOVERNMENT USE: If you are acquiring this software on behalf of the
-U.S. government, the Government shall have only "Restricted Rights"
-in the software and related documentation as defined in the Federal 
-Acquisition Regulations (FARs) in Clause 52.227.19 (c) (2).  If you
-are acquiring the software on behalf of the Department of Defense, the
-software shall be classified as "Commercial Computer Software" and the
-Government shall have only "Restricted Rights" as defined in Clause
-252.227-7013 (c) (1) of DFARs.  Notwithstanding the foregoing, the
-authors grant the U.S. Government and others acting in its behalf
-permission to use and distribute the software in accordance with the
-terms specified in this license. 

diff --git a/licenses/ucsf b/licenses/ucsf
deleted file mode 100644
index 7bc57ee..0000000
--- a/licenses/ucsf
+++ /dev/null
@@ -1,13 +0,0 @@
-UCSF Chimera Non-Commercial Software License Agreement
-
-This license agreement ("License"), effective today, is made by and between you (hereinafter referred to as the "Licensee") and The Regents of the University of California, a California corporation having its statewide administrative offices at 1111 Franklin Street, Oakland, California 94607-5200, ("Regents") acting through its Office of Technology Management, University of California San Francisco, 185 Berry Street, Suite 4603, San Francisco, California 94107, and concerns certain software known as "UCSF Chimera," a system of software programs for the visualization and interactive manipulation of molecular models, developed by the Computer Graphics Laboratory at the University of California San Francisco for research purposes and includes executable code, source code, and documentation (hereinafter referred to as the "Software").
-
-   1. General. A non-exclusive, nontransferable, perpetual license is granted to the Licensee to install and use the Software for academic, non-profit, or government-sponsored research purposes. Use of the Software under this License is restricted to non-commercial purposes. Commercial use of the Software requires a separately executed written license agreement.
-   2. Permitted Use and Restrictions. Licensee agrees that it will use the Software, and any modifications, improvements, or derivatives to the Software that the Licensee may create (collectively, "Improvements") solely for internal, non-commercial purposes and shall not distribute or transfer the Software or Improvements to any person or third parties without prior written permission from the Regents. The term "non-commercial," as used in this License, means academic or other scholarly research which (a) is not undertaken for profit, or (b) is not intended to produce works, services, or data for commercial use, or (c) is neither conducted, nor funded, by a person or an entity engaged in the commercial use, application or exploitation of works similar to the Software.
-   3. Ownership and Assignment of Copyright. The Licensee acknowledges that the Regents hold copyright in the Software and associated documentation, and the Software and associated documentation are the property of the Regents. The Licensee agrees that any Improvements made by Licensee shall be subject to the same terms and conditions as the Software. Licensee agrees not to assert a claim of infringement in Licensee copyrights in Improvements in the event the Regents prepares substantially similar modifications or derivative works. The Licensee agrees to use his/her reasonable best efforts to protect the contents of the Software and to prevent unauthorized disclosure by its agents, officers, employees, and consultants. If the Licensee receives a request to furnish all or any portion of the Software to a third party, Licensee will not fulfill such a request but will refer the third party to http://www.cgl.ucsf.edu/chimera/ so that the third party's use of this Software will b
 e subject to the terms and conditions of this License. Notwithstanding the above, Licensee may disclose any Improvements that do not involve disclosure of the Software.
-   4. Copies. The Licensee may make a reasonable number of copies of the Software for the purposes of backup, maintenance of the Software or the development of derivative works based on the Software. These additional copies shall carry the copyright notice and shall be controlled by this License, and will be destroyed along with the original by the Licensee upon termination of the License.
-   5. Acknowledgement. Licensee agrees that any publication of results obtained with the Software will acknowledge its use by an appropriate citation as specified in the documentation.
-   6. Disclaimer of Warranties and Limitation of Liability. THE LICENSEE AGREES THAT ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. THE REGENTS MAKES NO REPRESENTATION OR WARRANTY THAT THE SOFTWARE WILL NOT INFRINGE ANY PATENT OR OTHER PROPRIETARY RIGHT. IN NO EVENT SHALL THE REGENTS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-   7. Termination. This License is effective until terminated by either party. Your rights under this License will terminate automatically without notice from the Regents if you fail to comply with any term(s) of this License. You may terminate the license by giving written notice of termination to the Regents. Upon termination of this License, you shall immediately discontinue all use of the Software and destroy the original and all copies, full or partial, of the Software, including any modifications or derivative works, and associated documentation.
-   8. Governing Law and General Provisions. This License shall be governed by the laws of the State of California, excluding the application of its conflicts of law rules. This License shall not be governed by the United Nations Convention on Contracts for the International Sale of Goods, the application of which is expressly excluded. If any provisions of this License are held invalid or unenforceable for any reason, the remaining provisions shall remain in full force and effect. This License is binding upon any heirs and assigns of the Licensee. The License granted to Licensee hereunder may not be assigned or transferred to any other person or entity without the express consent of the Regents. This License constitutes the entire agreement between the parties with respect to the use of the Software licensed hereunder and supersedes all other previous or contemporaneous agreements or understandings between the parties, whether verbal or written, concerning the subject matter
 . Any translation of this License is done for local requirements and in the event of a dispute between the English and any non-English versions, the English version of this License shall govern. 
-

diff --git a/licenses/vina_license b/licenses/vina_license
deleted file mode 100644
index 3ccada2..0000000
--- a/licenses/vina_license
+++ /dev/null
@@ -1,135 +0,0 @@
-AUTODOCK VINA 1.0 SOFTWARE TRANSFER LICENSE AGREEMENT
-
-THIS SOFTWARE LICENSE AGREEMENT ("Agreement") is made by and between The 
-Scripps Research Institute ("TSRI"), having an address at 10550 N. Torrey Pines 
-Road, La Jolla, CA 92037 and yourself ("Recipient")
-
-RECITALS
-A. TSRI is the owner of the Software (as defined below).
-B. TSRI desires to grant to Recipient and Recipient desires to obtain from TSRI 
-a non-exclusive license to use the Software solely in accordance with the terms 
-and on the conditions set forth in this Agreement.
-
-NOW, THEREFORE, the parties hereto agree as follows:
-1. DEFINITIONS.
-1.1 "Software" shall mean the Vina computer program in binary executable form. 
-
-2. GRANT OF RIGHTS.
-The License granted for Software under this Agreement authorizes Recipient on a 
-nonexclusive basis to use one copy of the Software. Recipient may retain one 
-additional copy of the Software for archival purposes. Recipient agrees to use 
-the Software for internal non-commercial research purposes only, and shall not 
-distribute or transfer the Software to anyone not under the Recipient 
-Scientist's direct supervision or beyond the Recipient Scientist's 
-laboratory.
-
-3. DELIVERY.
-3.1 Software. TSRI shall deliver to Recipient a master copy of the Software 
-licensed hereunder in binary executable form, suitable for reproduction, in 
-electronic files only.
-
-4. MODIFICATIONS.
-4.1 Other Modifications. Recipient may, from time to time, request that TSRI 
-incorporate certain features, enhancements or modifications into the Software. 
-TSRI may, in its sole discretion, undertake to incorporate such changes, which 
-shall be the sole property of TSRI, and distribute the Software so modified to 
-all or any of TSRI's licensees. Any modifications or derivative works based on 
-the Software are considered part of the Software and ownership thereof is 
-retained by TSRI.
-
-5. COPIES AND RECORDS. Recipient agrees to maintain appropriate records of the 
-number and location of all copies of the Software.
-
-6. PROTECTION OF LICENSED SOFTWARE.
-6.1 Proprietary Notices. Recipient agrees to respect and not to remove, 
-obliterate, or cancel from view any copyright, trademark, confidentiality or 
-other proprietary notice, mark, or legend appearing on any of the Software or 
-output generated by the Software, and to reproduce and include same on each 
-copy of the Software. 
-
-6.2 Protection of Ownership. Recipient agrees to use its best efforts, 
-consistent with the practices and procedures Recipient takes to protect 
-Recipient's own most valuable proprietary information and materials, and will 
-take all reasonable steps to protect the Software and any pertinent 
-documentation and associated trade secrets against any unauthorized use, 
-reproduction, disclosure or distribution.
-
-7. CONFIDENTIALITY.
-7.1 Acknowledgement. Recipient hereby acknowledges and agrees that the Software 
-constitutes and contains valuable proprietary products and trade secrets of 
-TSRI embodying substantial creative efforts and confidential information, 
-ideas, and expressions. Accordingly, Recipient agrees to treat (and take 
-precautions to ensure that its employees treat) the Software as confidential, 
-not to disclose or permit to any third party or entity access to the Software 
-or any portion thereof without the written permission of a duly authorized 
-representative of TSRI.
-
-7.2 Injunctive Relief. Recipient acknowledges that the unauthorized use, 
-transfer or disclosure of the Software or copies thereof will (i) substantially 
-diminish the value to TSRI of the trade secrets and other proprietary interests 
-that are the subject of this Agreement; (ii) render TSRI's remedy at law for 
-such unauthorized use, disclosure or transfer inadequate; and (iii) cause 
-irreparable injury in a short period of time. If Recipient breaches any of its 
-obligations with respect to the use or confidentiality of the
-Software, TSRI shall be entitled to seek equitable relief to protect its 
-interests therein, including, but not limited to, preliminary and permanent 
-injunctive relief.
-
-7.3 Survival. Recipient's obligations under this Article 7 will survive the 
-termination of this Agreement or of any license granted under this Agreement 
-for whatever reason.
-
-8. WARRANTIES; SUPERIOR RIGHTS.
-8.1 Government Rights. Recipient understands that the Software may have been 
-developed under a funding agreement with the Government of the United States of 
-America and, if so, that the Government may have certain rights relative 
-thereto. This Agreement is explicitly made subject to the Government's rights 
-under any such agreement and any applicable law or regulation, if any. To the 
-extent that there
-is a conflict between any such agreement, applicable law or regulation and this 
-Agreement, the terms of such Government agreement, applicable law or regulation 
-shall prevail.
-
-8.2 Disclaimer of Warranties. ANY INFORMATION, MATERIALS OR SERVICES FURNISHED 
-BY TSRI PURSUANT TO THIS AGREEMENT ARE ON AN "AS IS" BASIS. TSRI DOES NOT 
-REPRESENT OR WARRANT THAT ALL ERRORS IN THE SOFTWARE WILL BE CORRECTED. THERE 
-ARE NO WARRANTIES RESPECTING THE SOFTWARE OR SERVICES PROVIDED HEREUNDER, 
-EITHER EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO ANY WARRANTY OF DESIGN, 
-MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, EVEN IF TSRI HAS BEEN 
-INFORMED OF SUCH PURPOSE OR THAT THE SOFTWARE WILL NOT INFRINGE ANY PATENT, 
-COPYRIGHT, TRADEMARK, OR OTHER PROPRIETARY RIGHTS. NO AGENT OF TSRI IS 
-AUTHORIZED TO ALTER OR EXCEED THE WARRANTY OBLIGATIONS OF TSRI AS SET FORTH 
-HEREIN.
-
-9. INDEMNIFICATION.
-Except to the extent prohibited by law, Recipient shall indemnify and hold 
-harmless, TSRI, its trustees, officers, agents and employees from and against 
-any claims, demands, or causes of action whatsoever, including without 
-limitation those arising on account of Recipient's modification or enhancement 
-of the Software or otherwise caused by, or arising out of, or resulting from, 
-the exercise or practice of the license granted hereunder by Recipient, its 
-sublicensees, if any, its subsidiaries or their officers, employees, agents or 
-representatives.
-
-10. NONASSIGNABILITY. Any and all assignments of this Agreement or any rights 
-granted hereunder by Recipient without the prior written consent of TSRI are 
-void except (i) to an affiliate of Recipient or (ii) as expressly permitted 
-hereunder.
-
-11. GOVERNING LAW; JURISDICTION AND VENUE. The validity, interpretation, 
-construction and performance of this Agreement shall be governed by the laws of 
-the State of California.
-
-12. SEVERABILITY. If any provision of this Agreement shall be held by a court 
-of competent jurisdiction to be illegal, invalid or unenforceable, the 
-remaining provisions shall remain in full force and effect. This Agreement and 
-its exhibits contain the entire understanding and agreement between the parties 
-respecting the subject matter hereof. This Agreement may not be supplemented, 
-modified, amended, released or discharged except by an instrument in writing 
-signed by each party's duly authorized representative. All captions and 
-headings in this Agreement are for purposes of convenience only and
-shall not affect the construction or interpretation of any of its provisions. 
-Any waiver by either party of any default or breach hereunder shall not 
-constitute a waiver of any provision of this Agreement or of any subsequent 
-default or breach of the same or a different kind.
-


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