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commit: 42596d56df426f43b2573388f97c0b22be42df16 |
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Author: Justin Lecher <jlec <AT> gentoo <DOT> org> |
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AuthorDate: Mon Jun 11 07:04:29 2012 +0000 |
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Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> |
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CommitDate: Mon Jun 11 07:04:29 2012 +0000 |
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URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=42596d56 |
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Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci |
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* 'master' of git+ssh://git.overlays.gentoo.org/proj/sci: |
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add support for new hybrid kernels |
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sci-biology/cluster: Correct masking, #419999 |
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added missing private headers |
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added petsc-3.3-p0 ebuild |
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sci-chemistry/mgltools-opengltk: Add missing dep on media-libs/glew and fix underlinking problem |
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sys-devel/gdebugger: Fix Manifest |
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Add missing hashes |
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Drop unused licenses |
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sci-biology/cluster: Rename cluster to cluster3, #419999 |
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Mask old dssp and make sci overlay user to tester |
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licenses/ASRP | 37 -- |
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licenses/AZARA | 86 ---- |
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licenses/Algodoo | 13 - |
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licenses/ApE | 19 - |
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licenses/CARA | 6 - |
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licenses/CCPN | 12 - |
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licenses/CeCILL-C | 517 -------------------- |
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licenses/Forthon | 32 -- |
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licenses/MolSoft | 111 ----- |
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licenses/Open-CASCADE-Technology-Public-License | 143 ------ |
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licenses/aldor-2 | 49 -- |
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licenses/amdlibm | 112 ----- |
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licenses/arb | 302 ------------ |
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licenses/blat | 9 - |
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licenses/cctbx-2.0 | 44 -- |
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licenses/dssp | 39 -- |
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licenses/eGenixPublic-1.0 | 86 ---- |
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licenses/fasta | 26 - |
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licenses/gmap | 36 -- |
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licenses/oasis | 56 --- |
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licenses/procheck | 230 --------- |
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licenses/psipred | 82 --- |
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licenses/scalasca | 35 -- |
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licenses/tktreectrl | 38 -- |
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licenses/ucsf | 13 - |
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licenses/vina_license | 135 ----- |
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metadata/layout.conf | 2 +- |
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profiles/package.mask | 4 + |
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sci-biology/cluster/ChangeLog | 9 + |
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...{cluster-1.50.ebuild => cluster-1.50-r1.ebuild} | 9 +- |
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sci-biology/cluster/cluster-1.50.ebuild | 4 +- |
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sci-chemistry/gromacs/ChangeLog | 4 + |
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sci-chemistry/gromacs/Manifest | 4 +- |
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sci-chemistry/gromacs/gromacs-4.6.9999.ebuild | 21 +- |
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sci-chemistry/gromacs/metadata.xml | 2 + |
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sci-chemistry/mgltools-opengltk/ChangeLog | 6 + |
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sci-chemistry/mgltools-opengltk/Manifest | 2 +- |
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.../files/mgltools-opengltk-1.5.6_rc2-glew.patch | 16 + |
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.../mgltools-opengltk-1.5.6_rc2-unbundle.patch | 2 +- |
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.../mgltools-opengltk-1.5.6_rc2.ebuild | 5 +- |
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sci-mathematics/petsc/Manifest | 1 + |
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...-pic.patch => petsc-3.3_p0-configure-pic.patch} | 0 |
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...tch => petsc-3.3_p0-disable-env-warnings.patch} | 0 |
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...path.patch => petsc-3.3_p0-disable-rpath.patch} | 0 |
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.../{petsc-3.2_p6.ebuild => petsc-3.3_p0.ebuild} | 28 +- |
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sys-devel/gdebugger/ChangeLog | 7 + |
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sys-devel/gdebugger/Manifest | 4 +- |
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47 files changed, 103 insertions(+), 2295 deletions(-) |
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