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markusle 09/08/06 14:19:15
Modified: ChangeLog
Added: vmd-1.8.7.ebuild
Log:
Version bump (fixes bug #262275).
(Portage version: 2.1.6.13/cvs/Linux x86_64)
Revision Changes Path
1.23 sci-chemistry/vmd/ChangeLog
file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/vmd/ChangeLog?rev=1.23&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/vmd/ChangeLog?rev=1.23&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/vmd/ChangeLog?r1=1.22&r2=1.23
Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/vmd/ChangeLog,v
retrieving revision 1.22
retrieving revision 1.23
diff -u -r1.22 -r1.23
--- ChangeLog 7 Jul 2009 22:54:52 -0000 1.22
+++ ChangeLog 6 Aug 2009 14:19:15 -0000 1.23
@@ -1,6 +1,12 @@
# ChangeLog for sci-chemistry/vmd
# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/vmd/ChangeLog,v 1.22 2009/07/07 22:54:52 flameeyes Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/vmd/ChangeLog,v 1.23 2009/08/06 14:19:15 markusle Exp $
+
+*vmd-1.8.7 (05 Aug 2009)
+
+ 05 Aug 2009; Markus Dittrich <markusle@g.o> +vmd-1.8.7.ebuild,
+ +files/vmd-1.8.7-config.patch, +files/vmd-1.8.7-use-bash-startup.patch:
+ Version bump (fixes bug #262275).
07 Jul 2009; Diego E. Pettenò <flameeyes@g.o> vmd-1.8.6-r1.ebuild:
Use elog for fetch error.
1.1 sci-chemistry/vmd/vmd-1.8.7.ebuild
file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/vmd/vmd-1.8.7.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-chemistry/vmd/vmd-1.8.7.ebuild?rev=1.1&content-type=text/plain
Index: vmd-1.8.7.ebuild
===================================================================
# Copyright 1999-2009 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/vmd/vmd-1.8.7.ebuild,v 1.1 2009/08/06 14:19:15 markusle Exp $
EAPI="2"
inherit eutils toolchain-funcs python
DESCRIPTION="Visual Molecular Dynamics"
LICENSE="vmd"
HOMEPAGE="http://www.ks.uiuc.edu/Research/vmd/"
SRC_URI="${P}.src.tar.gz"
SLOT="0"
KEYWORDS="~amd64 ~ppc ~x86"
IUSE=""
RESTRICT="fetch"
DEPEND="x11-libs/libXft
virtual/opengl
x11-libs/fltk:1.1
>=dev-lang/tcl-8.4
>=dev-lang/tk-8.4[-truetype]
=dev-lang/python-2*
dev-lang/perl
dev-python/numpy
sci-biology/stride
sci-libs/netcdf"
RDEPEND="${DEPEND}
x11-terms/xterm"
VMD_DOWNLOAD="http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=VMD"
pkg_nofetch() {
echo
elog "Please download ${SRC_URI} from"
elog "${VMD_DOWNLOAD}"
elog "after agreeing to the license and then move it to "
elog "${DISTDIR}"
echo
}
src_prepare() {
# apply LINUX-arch patches to vmd configure
epatch "${FILESDIR}/${P}-config.patch"
epatch "${FILESDIR}/${P}-use-bash-startup.patch"
# prepare the plugins
cd "${WORKDIR}"/plugins
sed -e "s:CC = gcc:CC = $(tc-getCC):" \
-e "s:CXX = g++:CXX = $(tc-getCXX):" \
-e "s:COPTO =.*\":COPTO = -fPIC -o\":" \
-e "s:LOPTO = .*\":LOPTO = -fPIC -o\":" \
-e "s:CCFLAGS =.*\":CCFLAGS = ${CFLAGS}\":" \
-e "s:CXXFLAGS =.*\":CXXFLAGS = ${CXXFLAGS}\":" \
-e "s:SHLD = gcc:SHLD = $(tc-getCC):" \
-e "s:-ltcl8.5:-ltcl:" \
-i Make-arch || die "Failed to set up plugins Makefile"
# prepare vmd itself
cd "${S}"
sed -e "s:gentoo-bindir:${D}/usr/bin:" \
-e "s:gentoo-libdir:${D}/usr/$(get_libdir):" \
-i configure || die "failed to adjust install paths"
sed -e "s:gentoo-opengl-include:/usr/include/GL:" \
-e "s:gentoo-opengl-libs:/usr/$(get_libdir):" \
-i configure || die "failed to adjust OpenGL paths"
sed -e "s:gentoo-gcc:$(tc-getCC):" \
-e "s:gentoo-g++:$(tc-getCXX):" \
-e "s:gentoo-cflags:${CFLAGS}:" \
-i configure || die "Failed to adjust C compiler/flags"
sed -e "s:gentoo-plugindir:${WORKDIR}/plugins:" \
-i configure || die "Failed to set up linking to plugin files"
sed -e "s:gentoo-fltk-include:/usr/include/fltk-1.1:" \
-e "s:gentoo-fltk-libs:/usr/$(get_libdir)/fltk-1.1:" \
-i configure || die "failed setting up fltk"
sed -e "s:gentoo-netcdf-include:/usr/include:" \
-e "s:gentoo-netcdf-libs:/usr/$(get_libdir):" \
-i configure || die "failed to set up netcdf"
# get installed python version
python_version
local PY="python${PYVER}"
local NUMPY_INCLUDE="site-packages/numpy/core/include"
sed -e "s:gentoo-python-include:/usr/include/${PY}:" \
-e "s:gentoo-python-lib:/usr/$(get_libdir)/${PY}:" \
-e "s:gentoo-python-link:${PY}:" \
-e "s:gentoo-numpy-include:/usr/$(get_libdir)/${PY}/${NUMPY_INCLUDE}:" \
-i configure || die "failed setting up python"
sed -e "s:LINUXPPC:LINUX:g" \
-e "s:LINUXALPHA:LINUX:g" \
-e "s:LINUXAMD64:LINUX:g" \
-i "${S}"/bin/vmd.sh || die "failed setting up vmd wrapper script"
}
src_configure() {
local myconfig="LINUX OPENGL FLTK TK TCL PTHREADS PYTHON IMD NETCDF NUMPY"
rm -f configure.options && echo $myconfig >> configure.options
./configure &> /dev/null || die "failed to configure"
}
src_compile() {
# build plugins
cd "${WORKDIR}"/plugins
make LINUX TCLINC="-I/usr/include" \
TCLLIB="-L/usr/$(get_libdir)" \
|| die "failed to build plugins"
# build vmd
cd "${S}"/src
emake || die "failed to build vmd"
}
src_install() {
# install plugins
cd "${WORKDIR}"/plugins
PLUGINDIR=${D}/usr/$(get_libdir)/${PN}/plugins make distrib || \
die "failed to install plugins"
# install vmd
cd "${S}"/src
make install || die "failed to install vmd"
# export STRIDE_BIN so VMD knows where to find stride
echo "STRIDE_BIN=/usr/bin/stride" > "${T}"/99${PN} || \
die "Failed to create vmd env file"
doenvd "${T}"/99${PN} || die "Failed to install vmd env file"
# install docs
cd "${S}"
dodoc Announcement README doc/ig.pdf doc/ug.pdf
# remove some of the things we don't want and need in
# /usr/lib
cd "${D}"/usr/$(get_libdir)/vmd
rm -fr doc README Announcement LICENSE || \
die "failed to clean up /usr/lib/vmd directory"
# adjust path in vmd wrapper
sed -e "s:${D}::" -i "${D}"/usr/bin/${PN} \
|| die "failed to set up vmd wrapper script"
}
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