| 1 |
jlec 11/09/27 08:26:00 |
| 2 |
|
| 3 |
Modified: eci depositionFileImporter pipe2azara dataShifter |
| 4 |
analysis formatConverter dangle extendNmr |
| 5 |
xeasy2azara |
| 6 |
Log: |
| 7 |
Fixes psipred detection, python file patches |
| 8 |
|
| 9 |
(Portage version: 2.2.0_alpha59/cvs/Linux x86_64) |
| 10 |
|
| 11 |
Revision Changes Path |
| 12 |
1.2 sci-chemistry/ccpn/files/eci |
| 13 |
|
| 14 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/eci?rev=1.2&view=markup |
| 15 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/eci?rev=1.2&content-type=text/plain |
| 16 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/eci?r1=1.1&r2=1.2 |
| 17 |
|
| 18 |
Index: eci |
| 19 |
=================================================================== |
| 20 |
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/ccpn/files/eci,v |
| 21 |
retrieving revision 1.1 |
| 22 |
retrieving revision 1.2 |
| 23 |
diff -u -r1.1 -r1.2 |
| 24 |
--- eci 6 Feb 2010 21:30:17 -0000 1.1 |
| 25 |
+++ eci 27 Sep 2011 08:26:00 -0000 1.2 |
| 26 |
@@ -5,4 +5,5 @@ |
| 27 |
export LD_LIBRARY_PATH=gentoolibdir |
| 28 |
export TCL_LIBRARY=gentootcl |
| 29 |
export TK_LIBRARY=gentootk |
| 30 |
+export PSIPRED_DIR=gentoousr |
| 31 |
gentoopython -O ${CCPNMR_TOP_DIR}/ccpn/python/ccpnmr/eci/EntryCompletionGui.py $* |
| 32 |
|
| 33 |
|
| 34 |
|
| 35 |
1.2 sci-chemistry/ccpn/files/depositionFileImporter |
| 36 |
|
| 37 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/depositionFileImporter?rev=1.2&view=markup |
| 38 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/depositionFileImporter?rev=1.2&content-type=text/plain |
| 39 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/depositionFileImporter?r1=1.1&r2=1.2 |
| 40 |
|
| 41 |
Index: depositionFileImporter |
| 42 |
=================================================================== |
| 43 |
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/ccpn/files/depositionFileImporter,v |
| 44 |
retrieving revision 1.1 |
| 45 |
retrieving revision 1.2 |
| 46 |
diff -u -r1.1 -r1.2 |
| 47 |
--- depositionFileImporter 21 Sep 2010 13:11:31 -0000 1.1 |
| 48 |
+++ depositionFileImporter 27 Sep 2011 08:26:00 -0000 1.2 |
| 49 |
@@ -5,4 +5,5 @@ |
| 50 |
export LD_LIBRARY_PATH=gentoolibdir |
| 51 |
export TCL_LIBRARY=gentootcl |
| 52 |
export TK_LIBRARY=gentootk |
| 53 |
+export PSIPRED_DIR=gentoousr |
| 54 |
gentoopython -O ${CCPNMR_TOP_DIR}/ccpn/python/pdbe/deposition/dataFileImport/dataFileImportGui.py $@ |
| 55 |
|
| 56 |
|
| 57 |
|
| 58 |
1.2 sci-chemistry/ccpn/files/pipe2azara |
| 59 |
|
| 60 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/pipe2azara?rev=1.2&view=markup |
| 61 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/pipe2azara?rev=1.2&content-type=text/plain |
| 62 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/pipe2azara?r1=1.1&r2=1.2 |
| 63 |
|
| 64 |
Index: pipe2azara |
| 65 |
=================================================================== |
| 66 |
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/ccpn/files/pipe2azara,v |
| 67 |
retrieving revision 1.1 |
| 68 |
retrieving revision 1.2 |
| 69 |
diff -u -r1.1 -r1.2 |
| 70 |
--- pipe2azara 6 Feb 2010 21:30:17 -0000 1.1 |
| 71 |
+++ pipe2azara 27 Sep 2011 08:26:00 -0000 1.2 |
| 72 |
@@ -5,4 +5,5 @@ |
| 73 |
export LD_LIBRARY_PATH=gentoolibdir |
| 74 |
export TCL_LIBRARY=gentootcl |
| 75 |
export TK_LIBRARY=gentootk |
| 76 |
+export PSIPRED_DIR=gentoousr |
| 77 |
gentoopython -O ${CCPNMR_TOP_DIR}/ccpn/python/ccp/format/spectra/params/NmrPipeData.py $1 $2 $3 $4 $5 $6 |
| 78 |
|
| 79 |
|
| 80 |
|
| 81 |
1.2 sci-chemistry/ccpn/files/dataShifter |
| 82 |
|
| 83 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/dataShifter?rev=1.2&view=markup |
| 84 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/dataShifter?rev=1.2&content-type=text/plain |
| 85 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/dataShifter?r1=1.1&r2=1.2 |
| 86 |
|
| 87 |
Index: dataShifter |
| 88 |
=================================================================== |
| 89 |
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/ccpn/files/dataShifter,v |
| 90 |
retrieving revision 1.1 |
| 91 |
retrieving revision 1.2 |
| 92 |
diff -u -r1.1 -r1.2 |
| 93 |
--- dataShifter 6 Feb 2010 21:30:17 -0000 1.1 |
| 94 |
+++ dataShifter 27 Sep 2011 08:26:00 -0000 1.2 |
| 95 |
@@ -5,4 +5,5 @@ |
| 96 |
export LD_LIBRARY_PATH=gentoolibdir |
| 97 |
export TCL_LIBRARY=gentootcl |
| 98 |
export TK_LIBRARY=gentootk |
| 99 |
+export PSIPRED_DIR=gentoousr |
| 100 |
gentoopython -O ${CCPNMR_TOP_DIR}/ccpn/python/ccpnmr/format/gui/DataShifter.py $1 $2 $3 $4 $5 $6 |
| 101 |
|
| 102 |
|
| 103 |
|
| 104 |
1.2 sci-chemistry/ccpn/files/analysis |
| 105 |
|
| 106 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/analysis?rev=1.2&view=markup |
| 107 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/analysis?rev=1.2&content-type=text/plain |
| 108 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/analysis?r1=1.1&r2=1.2 |
| 109 |
|
| 110 |
Index: analysis |
| 111 |
=================================================================== |
| 112 |
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/ccpn/files/analysis,v |
| 113 |
retrieving revision 1.1 |
| 114 |
retrieving revision 1.2 |
| 115 |
diff -u -r1.1 -r1.2 |
| 116 |
--- analysis 6 Feb 2010 21:30:17 -0000 1.1 |
| 117 |
+++ analysis 27 Sep 2011 08:26:00 -0000 1.2 |
| 118 |
@@ -5,4 +5,5 @@ |
| 119 |
export LD_LIBRARY_PATH=gentoolibdir |
| 120 |
export TCL_LIBRARY=gentootcl |
| 121 |
export TK_LIBRARY=gentootk |
| 122 |
+export PSIPRED_DIR=gentoousr |
| 123 |
gentoopython -i -O ${CCPNMR_TOP_DIR}/ccpn/python/ccpnmr/analysis/AnalysisGui.py $1 $2 $3 $4 $5 $6 |
| 124 |
|
| 125 |
|
| 126 |
|
| 127 |
1.2 sci-chemistry/ccpn/files/formatConverter |
| 128 |
|
| 129 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/formatConverter?rev=1.2&view=markup |
| 130 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/formatConverter?rev=1.2&content-type=text/plain |
| 131 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/formatConverter?r1=1.1&r2=1.2 |
| 132 |
|
| 133 |
Index: formatConverter |
| 134 |
=================================================================== |
| 135 |
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/ccpn/files/formatConverter,v |
| 136 |
retrieving revision 1.1 |
| 137 |
retrieving revision 1.2 |
| 138 |
diff -u -r1.1 -r1.2 |
| 139 |
--- formatConverter 6 Feb 2010 21:30:17 -0000 1.1 |
| 140 |
+++ formatConverter 27 Sep 2011 08:26:00 -0000 1.2 |
| 141 |
@@ -5,4 +5,5 @@ |
| 142 |
export LD_LIBRARY_PATH=gentoolibdir |
| 143 |
export TCL_LIBRARY=gentootcl |
| 144 |
export TK_LIBRARY=gentootk |
| 145 |
+export PSIPRED_DIR=gentoousr |
| 146 |
gentoopython -O ${CCPNMR_TOP_DIR}/ccpn/python/ccpnmr/format/gui/FormatConverter.py $1 $2 $3 $4 $5 $6 |
| 147 |
|
| 148 |
|
| 149 |
|
| 150 |
1.2 sci-chemistry/ccpn/files/dangle |
| 151 |
|
| 152 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/dangle?rev=1.2&view=markup |
| 153 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/dangle?rev=1.2&content-type=text/plain |
| 154 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/dangle?r1=1.1&r2=1.2 |
| 155 |
|
| 156 |
Index: dangle |
| 157 |
=================================================================== |
| 158 |
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/ccpn/files/dangle,v |
| 159 |
retrieving revision 1.1 |
| 160 |
retrieving revision 1.2 |
| 161 |
diff -u -r1.1 -r1.2 |
| 162 |
--- dangle 6 Feb 2010 21:30:17 -0000 1.1 |
| 163 |
+++ dangle 27 Sep 2011 08:26:00 -0000 1.2 |
| 164 |
@@ -5,4 +5,5 @@ |
| 165 |
export LD_LIBRARY_PATH=gentoolibdir |
| 166 |
export TCL_LIBRARY=gentootcl |
| 167 |
export TK_LIBRARY=gentootk |
| 168 |
+export PSIPRED_DIR=gentoousr |
| 169 |
gentoopython -O ${CCPNMR_TOP_DIR}/ccpn/python/cambridge/dangle/DangleGui.py $1 $2 $3 $4 $5 $6 |
| 170 |
|
| 171 |
|
| 172 |
|
| 173 |
1.2 sci-chemistry/ccpn/files/extendNmr |
| 174 |
|
| 175 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/extendNmr?rev=1.2&view=markup |
| 176 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/extendNmr?rev=1.2&content-type=text/plain |
| 177 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/extendNmr?r1=1.1&r2=1.2 |
| 178 |
|
| 179 |
Index: extendNmr |
| 180 |
=================================================================== |
| 181 |
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/ccpn/files/extendNmr,v |
| 182 |
retrieving revision 1.1 |
| 183 |
retrieving revision 1.2 |
| 184 |
diff -u -r1.1 -r1.2 |
| 185 |
--- extendNmr 21 Sep 2010 13:11:31 -0000 1.1 |
| 186 |
+++ extendNmr 27 Sep 2011 08:26:00 -0000 1.2 |
| 187 |
@@ -5,4 +5,5 @@ |
| 188 |
export LD_LIBRARY_PATH=gentoolibdir |
| 189 |
export TCL_LIBRARY=gentootcl |
| 190 |
export TK_LIBRARY=gentootk |
| 191 |
+export PSIPRED_DIR=gentoousr |
| 192 |
gentoopython -O -i -O ${CCPNMR_TOP_DIR}/ccpn/python/extendNmr/ExtendNmrGui.py $@ |
| 193 |
|
| 194 |
|
| 195 |
|
| 196 |
1.2 sci-chemistry/ccpn/files/xeasy2azara |
| 197 |
|
| 198 |
file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/xeasy2azara?rev=1.2&view=markup |
| 199 |
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/xeasy2azara?rev=1.2&content-type=text/plain |
| 200 |
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/ccpn/files/xeasy2azara?r1=1.1&r2=1.2 |
| 201 |
|
| 202 |
Index: xeasy2azara |
| 203 |
=================================================================== |
| 204 |
RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/ccpn/files/xeasy2azara,v |
| 205 |
retrieving revision 1.1 |
| 206 |
retrieving revision 1.2 |
| 207 |
diff -u -r1.1 -r1.2 |
| 208 |
--- xeasy2azara 22 Feb 2011 10:35:38 -0000 1.1 |
| 209 |
+++ xeasy2azara 27 Sep 2011 08:26:00 -0000 1.2 |
| 210 |
@@ -5,4 +5,5 @@ |
| 211 |
export LD_LIBRARY_PATH=gentoolibdir |
| 212 |
export TCL_LIBRARY=gentootcl |
| 213 |
export TK_LIBRARY=gentootk |
| 214 |
+export PSIPRED_DIR=gentoousr |
| 215 |
gentoopython -O ${CCPNMR_TOP_DIR}/ccpn/python/ccp/format/spectra/params/XeasyData.py $1 $2 $3 $4 $5 $6 |
Archives