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commit: f232fc33ddad7f0e36961486a4c6125a62feae29 |
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Author: Andrey Kislyuk <kislyuk <AT> gmail <DOT> com> |
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AuthorDate: Sun Jan 8 08:10:22 2012 +0000 |
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Commit: Andrey Kislyuk <weaver <AT> gentoo <DOT> org> |
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CommitDate: Sun Jan 8 08:10:22 2012 +0000 |
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URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=f232fc33 |
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|
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New package, ebuild written by me |
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|
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--- |
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sci-biology/igv/ChangeLog | 7 +++++++ |
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sci-biology/igv/igv-2.0.32.ebuild | 35 +++++++++++++++++++++++++++++++++++ |
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sci-biology/igv/metadata.xml | 9 +++++++++ |
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3 files changed, 51 insertions(+), 0 deletions(-) |
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|
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diff --git a/sci-biology/igv/ChangeLog b/sci-biology/igv/ChangeLog |
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new file mode 100644 |
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index 0000000..69f3a962 |
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--- /dev/null |
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+++ b/sci-biology/igv/ChangeLog |
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@@ -0,0 +1,7 @@ |
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+# ChangeLog for sci-biology/igv |
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+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 |
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+# $Header: $ |
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+ |
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+ 08 Jan 2012; Andrey Kislyuk <weaver@g.o> ChangeLog: |
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+ New package, ebuild written by me |
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+ |
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|
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diff --git a/sci-biology/igv/igv-2.0.32.ebuild b/sci-biology/igv/igv-2.0.32.ebuild |
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new file mode 100644 |
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index 0000000..ef2dc7f |
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--- /dev/null |
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+++ b/sci-biology/igv/igv-2.0.32.ebuild |
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@@ -0,0 +1,35 @@ |
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+# Copyright 1999-2012 Gentoo Foundation |
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+# Distributed under the terms of the GNU General Public License v2 |
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+# $Header: $ |
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+ |
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+EAPI=4 |
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+ |
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+#ESVN_REPO_URI="http://igv.googlecode.com/svn/trunk" |
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+ESVN_REPO_URI="http://igv.googlecode.com/svn/tags/Version_${PV}" |
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+ |
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+EANT_BUILD_TARGET="all" |
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+JAVA_ANT_REWRITE_CLASSPATH="true" |
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+EANT_NEEDS_TOOLS="true" |
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+WANT_ANT_TASKS="ant-apache-bcel" |
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+ |
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+inherit subversion java-pkg-2 java-ant-2 |
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+ |
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+DESCRIPTION="Integrative Genomics Viewer" |
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+HOMEPAGE="http://www.broadinstitute.org/igv/" |
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+SRC_URI="" |
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+LICENSE="LGPL-2.1" |
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+SLOT="0" |
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+IUSE="" |
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+KEYWORDS="~amd64" |
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+ |
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+COMMON_DEPS="" |
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+DEPEND=">=virtual/jdk-1.6 |
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+ ${COMMON_DEPS}" |
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+RDEPEND=">=virtual/jre-1.6 |
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+ ${COMMON_DEPS}" |
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+ |
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+src_install() { |
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+ java-pkg_newjar igv.jar |
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+ for i in lib/*.jar; do java-pkg_dojar $i; done |
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+ java-pkg_dolauncher igv --jar igv.jar --main org.broad.igv.ui.Main |
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+} |
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|
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diff --git a/sci-biology/igv/metadata.xml b/sci-biology/igv/metadata.xml |
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new file mode 100644 |
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index 0000000..3302123 |
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--- /dev/null |
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+++ b/sci-biology/igv/metadata.xml |
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@@ -0,0 +1,9 @@ |
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+<?xml version="1.0" encoding="UTF-8"?> |
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+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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+<pkgmetadata> |
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+ <maintainer> |
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+ <email>weaver@g.o</email> |
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+ <name>Andrey Kislyuk</name> |
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+ </maintainer> |
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+ <herd>sci-biology</herd> |
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+</pkgmetadata> |
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