[gentoo-commits] proj/sci:master commit in: sci-physics/atompaw/, sci-physics/abinit/files/, sci-physics/abinit/, ...

[Honza Macháček]

commit:     e5021743306a42e0f90557907dcc58aac185790b
Author:     Honza Macháček <Hloupy.Honza <AT> centrum <DOT> cz>
AuthorDate: Fri Apr 20 11:39:39 2012 +0000
Commit:     Honza Macháček <Hloupy.Honza <AT> centrum <DOT> cz>
CommitDate: Fri Apr 20 11:39:39 2012 +0000
URL:        http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=e5021743

sci-physics/abinit-6.12.* improved to find uudecode, a patch created for that by mistake removed once more. Several packages related to Abinit, including sci-physics/elk, version-bumped.

---
 sci-libs/fox/ChangeLog                         |    9 ++-
 sci-libs/fox/fox-4.1.2.ebuild                  |   61 +++++++++++++
 sci-libs/fox/metadata.xml                      |   11 ++-
 sci-physics/abinit/ChangeLog                   |    4 +
 sci-physics/abinit/abinit-6.12.2.ebuild        |    8 +--
 sci-physics/abinit/abinit-6.12.3.ebuild        |    8 +--
 sci-physics/abinit/files/6.12.1-gui-conf.patch |   12 ---
 sci-physics/atompaw/ChangeLog                  |    8 ++-
 sci-physics/atompaw/atompaw-3.0.1-r1.ebuild    |   68 --------------
 sci-physics/atompaw/atompaw-3.0.1.4.ebuild     |   70 ++++++++++++++
 sci-physics/atompaw/atompaw-3.0.1.ebuild       |   66 --------------
 sci-physics/elk/ChangeLog                      |    7 ++-
 sci-physics/elk/elk-1.4.18.ebuild              |  115 ++++++++++++++++++++++++
 13 files changed, 279 insertions(+), 168 deletions(-)

diff --git a/sci-libs/fox/ChangeLog b/sci-libs/fox/ChangeLog
index 791c95e..5ab07b1 100644
--- a/sci-libs/fox/ChangeLog
+++ b/sci-libs/fox/ChangeLog
@@ -1,7 +1,14 @@
 # ChangeLog for sci-libs/fox
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*fox-4.1.2 (19 Apr 2012)
+
+  19 Apr 2012; Honza Macháček <Hloupy.Honza@×××××××.cz> +fox-4.1.2.ebuild,
+  metadata.xml:
+  A version bump to 4.1.2. Not moved to autotools-utils, does not like out of
+  the tree compilation. Metadata improved.
+
   24 Jun 2011; Justin Lecher <jlec@g.o> fox-4.0.4.ebuild,
   fox-4.1.0.ebuild:
   Fix CVS Header , remove LICENSE from installation

diff --git a/sci-libs/fox/fox-4.1.2.ebuild b/sci-libs/fox/fox-4.1.2.ebuild
new file mode 100644
index 0000000..de3ba9f
--- /dev/null
+++ b/sci-libs/fox/fox-4.1.2.ebuild
@@ -0,0 +1,61 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=4
+
+inherit eutils
+
+MY_PN="FoX"
+MY_P="${MY_PN}-${PV}"
+
+DESCRIPTION="A library designed to allow the easy use of XML from Fortran"
+HOMEPAGE="http://www1.gly.bris.ac.uk/~walker/FoX/"
+SRC_URI="http://www1.gly.bris.ac.uk/~walker/FoX/source/${MY_P}-full.tar.gz"
+
+LICENSE="BSD ZLIB"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="debug doc +dom +fast +sax +wcml +wkml +wxml"
+
+S="${WORKDIR}/${MY_P}"
+
+DOCS=( README.FoX.txt Changelog )
+
+FORTRAN_STANDARD=90
+
+src_prepare() {
+	epatch "${FILESDIR}"/4.0.4-install-customizations.patch
+}
+
+src_configure() {
+		econf --prefix=/usr \
+		$(use_enable debug) \
+		$(use_enable dom) \
+		$(use_enable fast) \
+		$(use_enable sax) \
+		$(use_enable wcml) \
+		$(use_enable wkml) \
+		$(use_enable wxml) \
+		FCFLAGS="${FCFLAGS:- ${FFLAGS:- -O2}}"
+}
+
+src_compile() {
+	emake -j1 || die "make failed"
+}
+
+src_test() {
+	emake -j1 check || die "make check failed"
+	einfo "Please look at the last few RESULT lines for a summary."
+}
+
+src_install() {
+	sed -i -e's%^comp_prefix=.*$%comp_prefix=/usr%' \
+		-e's%comp_prefix/finclude%comp_prefix/lib/finclude%' \
+		FoX-config
+	emake -j1 DESTDIR="${D}" install || die "make install failed"
+	dodoc README.FoX.txt Changelog || die "dodoc failed"
+	if use doc; then
+		dohtml -r DoX/ || die "installing the HTML docs failed"
+	fi
+}

diff --git a/sci-libs/fox/metadata.xml b/sci-libs/fox/metadata.xml
index 0ad2e28..0d10e10 100644
--- a/sci-libs/fox/metadata.xml
+++ b/sci-libs/fox/metadata.xml
@@ -6,10 +6,11 @@
     <email>sci@g.o</email>
   </maintainer>
   <use>
-    <flag name="dom">Automatically generated description for dom</flag>
-    <flag name="fast">Automatically generated description for fast</flag>
-    <flag name="sax">Automatically generated description for sax</flag>
-    <flag name="wcml">Automatically generated description for wcml</flag>
-    <flag name="wxml">Automatically generated description for wxml</flag>
+    <flag name="dom">Compile the W3C document object model module</flag>
+    <flag name="fast">Compile with best known optimization flags</flag>
+    <flag name="sax">Compile the streaming, validating parser based on java's Simple API for XML</flag>
+    <flag name="wcml">Compile the module for a subset of the Chemical Markup Language</flag>
+    <flag name="wkml">Compile the module for the creation of KML documents used by applications such as Google Earth</flag>
+    <flag name="wxml">Compile the XML writer used to sequentially create arbitrary XML documents quickly with minimal memory requirements</flag>
   </use>
 </pkgmetadata>

diff --git a/sci-physics/abinit/ChangeLog b/sci-physics/abinit/ChangeLog
index 60fb829..23db32a 100644
--- a/sci-physics/abinit/ChangeLog
+++ b/sci-physics/abinit/ChangeLog
@@ -2,6 +2,10 @@
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+  19 Apr 2012; Honza Macháček <Hloupy.Honza@×××××××.cz>
+  -files/6.12.1-gui-conf.patch, abinit-6.12.2.ebuild, abinit-6.12.3.ebuild:
+  GUI configuration corrected (to find uudecode).
+
 *abinit-6.12.3 (13 Apr 2012)
 
   13 Apr 2012; Honza Macháček <Hloupy.Honza@×××××××.cz>

diff --git a/sci-physics/abinit/abinit-6.12.2.ebuild b/sci-physics/abinit/abinit-6.12.2.ebuild
index ddb4355..5fa4e8c 100644
--- a/sci-physics/abinit/abinit-6.12.2.ebuild
+++ b/sci-physics/abinit/abinit-6.12.2.ebuild
@@ -114,12 +114,6 @@ src_prepare() {
 	epatch "${FILESDIR}"/6.12.1-libabinit_options.patch
 	eautoreconf
 
-	if use gui; then
-		epatch "${FILESDIR}"/6.12.1-gui-conf.patch
-		pushd "${S}"/gui > /dev/null
-		./autogen.sh
-		popd
-	fi
 }
 
 src_configure() {
@@ -218,7 +212,7 @@ src_configure() {
 		pushd "${AUTOTOOLS_BUILD_DIR}" > /dev/null
 		mkdir -p gui
 		cd gui
-		ECONF_SOURCE="${S}"/gui econf
+		ECONF_SOURCE="${S}"/gui econf UUDECODE="uudecode"
 	fi
 }
 

diff --git a/sci-physics/abinit/abinit-6.12.3.ebuild b/sci-physics/abinit/abinit-6.12.3.ebuild
index d18f5ff..aacc90a 100644
--- a/sci-physics/abinit/abinit-6.12.3.ebuild
+++ b/sci-physics/abinit/abinit-6.12.3.ebuild
@@ -114,12 +114,6 @@ src_prepare() {
 	epatch "${FILESDIR}"/6.12.1-libabinit_options.patch
 	eautoreconf
 
-	if use gui; then
-		epatch "${FILESDIR}"/6.12.1-gui-conf.patch
-		pushd "${S}"/gui > /dev/null
-		./autogen.sh
-		popd
-	fi
 }
 
 src_configure() {
@@ -218,7 +212,7 @@ src_configure() {
 		pushd "${AUTOTOOLS_BUILD_DIR}" > /dev/null
 		mkdir -p gui
 		cd gui
-		ECONF_SOURCE="${S}"/gui econf
+		ECONF_SOURCE="${S}"/gui econf UUDECODE="uudecode"
 	fi
 }
 

diff --git a/sci-physics/abinit/files/6.12.1-gui-conf.patch b/sci-physics/abinit/files/6.12.1-gui-conf.patch
deleted file mode 100644
index 95c12b3..0000000
--- a/sci-physics/abinit/files/6.12.1-gui-conf.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff -Naur abinit-6.12.1_orig/gui/configure abinit-6.12.1/gui/configure
---- gui/configure	2012-01-30 19:42:26.000000000 +0000
-+++ gui/configure	2012-03-16 13:38:54.000000000 +0000
-@@ -3143,7 +3143,7 @@
-   test -z "$as_dir" && as_dir=.
-     for ac_exec_ext in '' $ac_executable_extensions; do
-   if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
--    ac_cv_prog_UUDECODE="no"
-+    ac_cv_prog_UUDECODE="$as_dir/$ac_word$ac_exec_ext"
-     $as_echo "$as_me:${as_lineno-$LINENO}: found $as_dir/$ac_word$ac_exec_ext" >&5
-     break 2
-   fi

diff --git a/sci-physics/atompaw/ChangeLog b/sci-physics/atompaw/ChangeLog
index 4687ce8..4b4190a 100644
--- a/sci-physics/atompaw/ChangeLog
+++ b/sci-physics/atompaw/ChangeLog
@@ -1,7 +1,13 @@
 # ChangeLog for sci-physics/atompaw
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*atompaw-3.0.1.4 (18 Apr 2012)
+
+  18 Apr 2012; Honza Macháček <Hloupy.Honza@×××××××.cz>
+  -atompaw-3.0.1.ebuild, -atompaw-3.0.1-r1.ebuild, +atompaw-3.0.1.4.ebuild:
+  A version bump to 3.0.1.4 with transition to autotools-utils.
+
 *atompaw-3.0.1.3 (09 Nov 2011)
 
   09 Nov 2011; Honza Macháček <Hloupy.Honza@×××××××.cz>

diff --git a/sci-physics/atompaw/atompaw-3.0.1-r1.ebuild b/sci-physics/atompaw/atompaw-3.0.1-r1.ebuild
deleted file mode 100644
index 1b26df1..0000000
--- a/sci-physics/atompaw/atompaw-3.0.1-r1.ebuild
+++ /dev/null
@@ -1,68 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=3
-
-inherit eutils fortran-2 multilib toolchain-funcs
-
-DESCRIPTION="PAW atomic data generator"
-HOMEPAGE="http://www.wfu.edu/~natalie/papers/pwpaw/man.html"
-SRC_URI="http://www.wfu.edu/~natalie/papers/pwpaw/${P}.tar.gz
-	doc? ( http://www.wfu.edu/~natalie/papers/pwpaw/atompaw.pdf
-		http://www.wfu.edu/~natalie/papers/pwpaw/atompaw-usersguide.pdf
-		http://www.wfu.edu/~natalie/papers/pwpaw/notes/atompaw/atompawEqns.pdf )"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc libxc"
-
-RDEPEND="virtual/lapack
-	virtual/blas
-	libxc? ( sci-libs/libxc[fortran] )"
-DEPEND="${RDEPEND}
-	dev-util/pkgconfig"
-
-src_unpack() {
-	unpack ${P}.tar.gz
-	if use doc; then
-		cp "${DISTDIR}"/atompaw.pdf "${S}"/
-		cp "${DISTDIR}"/atompaw-usersguide.pdf "${S}"/
-		cp "${DISTDIR}"/atompawEqns.pdf "${S}"/
-	fi
-}
-
-src_prepare() {
-	cd ${S}
-	epatch ${FILESDIR}/3.0.1-longplot.patch	      
-}
-
-src_configure() {
-	local modules="-I/usr/$(get_libdir)/finclude"
-	econf $(use_enable libxc) \
-	--with-linalg-flavor=atlas \
-	--with-linalg-libs="$(pkg-config --libs lapack)" \
-	--with-libxc-incs="${modules}" \
-	--with-libxc-libs="${libs} -lxc" \
-	FC="$(tc-getFC)" FCFLAGS="${FCFLAGS:- ${FFLAGS:- -O2}}" \
-	CC="$(tc-getCC)" LDFLAGS="${LDFLAGS:- ${CFLAGS:- -O2}}"
-}
-
-src_compile() {
-	emake -j1 || die "Make failed"
-}
-
-src_test() {
-	emake check || die "Test failed"
-}
-
-src_install() {
-	emake DESTDIR="${D}" install || die "make install failed"
-
-	dodoc README || die "dodoc failed"
-
-	if use doc; then
-		dodoc atompaw.pdf atompaw-usersguide.pdf atompawEqns.pdf || die "PDF doc failed"
-	fi
-}

diff --git a/sci-physics/atompaw/atompaw-3.0.1.4.ebuild b/sci-physics/atompaw/atompaw-3.0.1.4.ebuild
new file mode 100644
index 0000000..3e7a2d9
--- /dev/null
+++ b/sci-physics/atompaw/atompaw-3.0.1.4.ebuild
@@ -0,0 +1,70 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=4
+
+inherit autotools-utils fortran-2 multilib toolchain-funcs
+
+DESCRIPTION="PAW atomic data generator"
+HOMEPAGE="http://www.wfu.edu/~natalie/papers/pwpaw/man.html"
+SRC_URI="http://www.wfu.edu/~natalie/papers/pwpaw/${P}.tar.gz
+	doc? ( http://www.wfu.edu/~natalie/papers/pwpaw/atompaw.pdf
+		http://www.wfu.edu/~natalie/papers/pwpaw/notes/atompaw/atompawEqns.pdf )"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="doc libxc"
+
+RDEPEND="virtual/lapack
+	virtual/blas
+	libxc? ( sci-libs/libxc[fortran] )"
+DEPEND="${RDEPEND}
+	dev-util/pkgconfig"
+
+DOCS=( README  )
+
+FORTRAN_STANDARD=90
+
+src_unpack() {
+	unpack ${P}.tar.gz
+	if use doc; then
+		cp "${DISTDIR}"/atompaw.pdf "${S}"/doc/
+		cp "${DISTDIR}"/atompawEqns.pdf "${S}"/doc/
+	fi
+}
+
+src_prepare() {
+	epatch ${FILESDIR}/3.0.1-longplot.patch
+}
+
+src_configure() {
+	local modules="-I/usr/$(get_libdir)/finclude"
+	local myeconfargs=(
+		$(use_enable libxc)
+		--with-linalg-flavor=atlas
+		--with-linalg-libs="$(pkg-config --libs lapack)"
+		--with-libxc-incs="-I/usr/include ${modules}"
+		--with-libxc-libs="${libs} -lxc"
+		FC="$(tc-getFC)" FCFLAGS="${FCFLAGS:- ${FFLAGS:- -O2}}"
+		CC="$(tc-getCC)" LDFLAGS="${LDFLAGS:- ${CFLAGS:- -O2}}"
+	)
+	autotools-utils_src_configure
+}
+
+src_compile() {
+	autotools-utils_src_compile -j1
+}
+
+src_test() {
+	use test && autotools-utils_src_test
+}
+
+src_install() {
+	autotools-utils_src_install
+
+	if use doc; then
+		dodoc doc/atompaw.pdf doc/atompawEqns.pdf || die "PDF doc failed"
+	fi
+}

diff --git a/sci-physics/atompaw/atompaw-3.0.1.ebuild b/sci-physics/atompaw/atompaw-3.0.1.ebuild
deleted file mode 100644
index 41a0bcf..0000000
--- a/sci-physics/atompaw/atompaw-3.0.1.ebuild
+++ /dev/null
@@ -1,66 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-EAPI=3
-
-inherit eutils fortran-2 multilib toolchain-funcs
-
-DESCRIPTION="PAW atomic data generator"
-HOMEPAGE="http://www.wfu.edu/~natalie/papers/pwpaw/man.html"
-SRC_URI="
-	http://www.wfu.edu/~natalie/papers/pwpaw/${P}.tar.gz
-	doc? (
-		http://www.wfu.edu/~natalie/papers/pwpaw/atompaw.pdf
-		http://www.wfu.edu/~natalie/papers/pwpaw/atompaw-usersguide.pdf
-		http://www.wfu.edu/~natalie/papers/pwpaw/notes/atompaw/atompawEqns.pdf )"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="doc libxc"
-
-RDEPEND="
-	virtual/lapack
-	virtual/blas
-	libxc? ( sci-libs/libxc[fortran] )"
-DEPEND="${RDEPEND}
-	dev-util/pkgconfig"
-
-src_unpack() {
-	unpack ${P}.tar.gz
-	if use doc; then
-		cp "${DISTDIR}"/atompaw.pdf "${S}"/
-		cp "${DISTDIR}"/atompaw-usersguide.pdf "${S}"/
-		cp "${DISTDIR}"/atompawEqns.pdf "${S}"/
-	fi
-}
-
-src_configure() {
-	local modules="-I/usr/$(get_libdir)/finclude"
-	econf $(use_enable libxc) \
-	--with-linalg-flavor=atlas \
-	--with-linalg-libs="$(pkg-config --libs lapack)" \
-	--with-libxc-incs="${modules}" \
-	--with-libxc-libs="${libs} -lxc" \
-	FC="$(tc-getFC)" FCFLAGS="${FCFLAGS:- ${FFLAGS:- -O2}}" \
-	CC="$(tc-getCC)" LDFLAGS="${LDFLAGS:- ${CFLAGS:- -O2}}"
-}
-
-src_compile() {
-	emake -j1 || die "Make failed"
-}
-
-src_test() {
-	emake check || die "Test failed"
-}
-
-src_install() {
-	emake DESTDIR="${D}" install || die "make install failed"
-
-	dodoc README || die "dodoc failed"
-
-	if use doc; then
-		dodoc atompaw.pdf atompaw-usersguide.pdf atompawEqns.pdf || die "PDF doc failed"
-	fi
-}

diff --git a/sci-physics/elk/ChangeLog b/sci-physics/elk/ChangeLog
index 34c82fc..b184d1c 100644
--- a/sci-physics/elk/ChangeLog
+++ b/sci-physics/elk/ChangeLog
@@ -1,7 +1,12 @@
 # ChangeLog for sci-physics/elk
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: $
 
+*elk-1.4.18 (18 Apr 2012)
+
+  18 Apr 2012; Honza Macháček <Hloupy.Honza@×××××××.cz> +elk-1.4.18.ebuild:
+  A version bump to 1.4.18.
+
 *elk-1.4.5 (14 Dec 2011)
 
   14 Dec 2011; Honza Macháček <Hloupy.Honza@×××××××.cz> elk-1.3.15.ebuild,

diff --git a/sci-physics/elk/elk-1.4.18.ebuild b/sci-physics/elk/elk-1.4.18.ebuild
new file mode 100644
index 0000000..27b3f3a
--- /dev/null
+++ b/sci-physics/elk/elk-1.4.18.ebuild
@@ -0,0 +1,115 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI="4"
+
+inherit eutils fortran-2 multilib toolchain-funcs
+
+DESCRIPTION="All-electron full-potential linearised augmented-plane wave (FP-LAPW) code with advanced features."
+HOMEPAGE="http://elk.sourceforge.net/"
+SRC_URI="mirror://sourceforge/${PN}/${P}.tgz"
+
+LICENSE="GPL-3"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="-debug lapack libxc mpi openmp perl test"
+
+RDEPEND="lapack? ( virtual/blas
+		virtual/lapack )
+	libxc? ( =sci-libs/libxc-1*[fortran] )
+	mpi? ( virtual/mpi )"
+DEPEND="${RDEPEND}
+	perl? ( dev-lang/perl )
+	dev-util/pkgconfig"
+
+DOCS=( README  )
+
+FORTRAN_STANDARD=90
+
+pkg_setup() {
+	# fortran-2.eclass does not handle mpi wrappers
+	if use mpi; then
+		export FC="mpif90"
+		export F77="mpif77"
+		export CC="mpicc"
+		export CXX="mpic++"
+	else
+		tc-export FC F77 CC CXX
+	fi
+
+	if use openmp; then
+		FORTRAN_NEED_OPENMP=1
+	fi
+
+	fortran-2_pkg_setup
+
+	if use openmp; then
+		export FC="${FC} -fopenmp"
+		export F77="${F77} -fopenmp"
+		export CC="${CC} -fopenmp"
+		export CXX="${CXX} -fopenmp"
+	fi
+}
+
+src_prepare() {
+	if use libxc; then
+		sed -i -e's/^\(SRC_libxc =\)/#\1/' "${S}/src/Makefile"
+	fi
+	if use mpi; then
+		sed -i -e's/^\(SRC_mpi =\)/#\1/' "${S}/src/Makefile"
+	fi
+}
+
+src_configure() {
+	FCFLAGS="${FCFLAGS:- ${FFLAGS:- -O3 -funroll-loops -ffast-math}}"
+	FCFLAGS="${FCFLAGS} -I/usr/include -I/usr/$(get_libdir)/finclude"
+	CFLAGS="${CFLAGS:- -O3 -funroll-loops -ffast-math}"
+	CXXFLAGS="${CXXFLAGS:- ${CFLAGS}}"
+	export FCFLAGS CFLAGS CXXFLAGS
+	echo "MAKE = make" > make.inc
+	echo "F90 = $FC" >> make.inc
+	echo "F90_OPTS = $FCFLAGS" >> make.inc
+	echo "F77 = $FC" >> make.inc
+	echo "F77_OPTS = $FCFLAGS" >> make.inc
+	echo "CC = ${CC}" >> make.inc
+	echo "CXX = ${CXX}" >> make.inc
+	echo "CFLAGS = ${CFLAGS}" >> make.inc
+	echo "CXXFLAGS = ${CXXFLAGS}" >> make.inc
+	echo "LD = $(tc-getLD)" >> make.inc
+	echo "AR = ar" >> make.inc
+	echo "LIB_SYS = " >> make.inc
+	if use lapack; then
+		echo "LIB_LPK = $(pkg-config --libs lapack)" >> make.inc
+	else
+		echo "LIB_LPK = lapack.a blas.a" >> make.inc
+	fi
+	echo "LIB_FFT = fftlib.a" >> make.inc
+	if use libxc; then
+		echo "LIB_XC = -L/usr/$(get_libdir) -lxc" >> make.inc
+		echo "SRC_libxc = libxc_funcs.f90 libxc.f90 libxcifc.f90" >>make.inc
+	fi
+}
+
+src_compile() {
+	emake -j1 || die "make failed"
+}
+
+src_test() {
+	emake test
+}
+
+src_install() {
+	dobin src/elk src/protex src/eos/eos src/spacegroup/spacegroup
+	dobin utilities/elk-bands
+	use perl && dobin utilities/xps_exc.pl utilities/se.pl
+	dodoc README
+	for doc in docs/*; do
+		dodoc $doc
+	done
+	insinto /usr/share/${P}
+	doins -r species
+	doins -r utilities
+	doins -r examples
+	doins -r tests
+}