Gentoo Archives: gentoo-science

From: Olivier Fisette <ribosome@g.o>
To: gentoo-science@l.g.o
Subject: Re: [gentoo-science] New category proposal - sci-vis
Date: Mon, 30 Jan 2006 21:23:31
Message-Id: 200601301622.01106.ribosome@gentoo.org
In Reply to: Re: [gentoo-science] New category proposal - sci-vis by Markus Dittrich
1 On Sunday, 29 January 2006 09:29 pm, Markus Dittrich wrote:
2 > I would tend to say yes, since molecular graphics programs can vizualize
3 > everything from small molecules to large biomolecular systems.
4 > Hence, I would have a hard time deciding if, e.g. VMD should
5 > be sci-biology or sci-chemistry, whereas sci-visualization seems
6 > natural. I would really like to hear opinions before I commit
7 > VMD to portage.
8
9 Personally, I would rather keep the specialised visualisation applications in
10 their respective categories and use sci-visualisation for general-purpose
11 tools. Doing otherwise would create confusion, I think. For instance, should
12 TreeViewX be moved to sci-visualisation? After all, it is a visualisation
13 program for phylogenies produced by other tools, such as PHYLIP. However,
14 users are more likely to search for that tool in sci-biology. Does a genome
15 browser belong in sci-visualisation? What about packages such as EMBOSS, that
16 propose a few visualisation programs, along with analysis tools?
17
18 I think it is better to classify packages according to their field of
19 application, and keep visualisation packages that are not tied to a
20 particular field in sci-visualisation (ie. statu quo).
21
22 Regards,
23
24 --
25 Olivier Fisette (ribosome)
26 Gentoo Linux Developer
27 Scientific applications, Developer relations

Replies

Subject Author
Re: [gentoo-science] New category proposal - sci-vis Markus Dittrich <markusle@g.o>