Gentoo Archives: gentoo-science

From: rose@××××××××××××××.de
To: gentoo-science@l.g.o
Subject: [gentoo-science] sci-mathematics/sage-4.7.1-r2 still circumvents the installation of numpy > numpy-1.5.1
Date: Sun, 09 Oct 2011 16:06:06
Message-Id: 20111009180544.f6r9vdhta88wkw88@webmail.uni-potsdam.de
The installation of scipy-0.9.0-r2 is blocked by sage-4.7.1-r2,  
because 'emerge scipy' fails if numpy-1.5.1 and not numpy-1.6.1-r1 is  
installed. But the installation of numpy-1.6.1-r1 is blocked by  
sage-4.7.1-r2:

root@impala:/root(2)# emerge -pvuDN world
These are the packages that would be merged, in order:
Calculating dependencies... done!
[ebuild     U  ] sci-libs/scipy-0.9.0-r2 [0.9.0-r1] USE="doc -umfpack" 0 kB
Total: 1 package (1 upgrade), Size of downloads: 0 kB
WARNING: One or more updates have been skipped due to a dependency conflict:
dev-python/numpy:0
   (dev-python/numpy-1.6.1-r1::gentoo, ebuild scheduled for merge)  
conflicts with
     ~dev-python/numpy-1.5.1 required by  
(sci-mathematics/sage-4.7.1-r2::sage-on-gentoo, installed)
dev-python/pexpect:0
   (dev-python/pexpect-2.4-r1::sage-on-gentoo, ebuild scheduled for  
merge) conflicts with
     ~dev-python/pexpect-2.0 required by  
(sci-mathematics/sage-4.7.1-r2::sage-on-gentoo, installed)

The restriction to numpy-1.5.1 was motivated with missing clapack_*  
symbols corresonding to Bug  
https://bugs.gentoo.org/show_bug.cgi?id=371099.

But this issue seems to be solved now, comment 40 to Bug 371099.

Replies