Gentoo Archives: gentoo-science

From: Markus Dittrich <markusle@g.o>
To: Donnie Berkholz <spyderous@g.o>
Cc: gentoo-science@l.g.o
Subject: [gentoo-science] Re: New category proposal - sci-vis
Date: Mon, 28 Nov 2005 05:37:09
Message-Id: Pine.LNX.4.56L0.0511280534080.2981@toucan.gentoo.org
In Reply to: [gentoo-science] Re: New category proposal - sci-vis by Donnie Berkholz
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4 On Sun, 27 Nov 2005, Donnie Berkholz wrote:
5
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9 > Markus Dittrich wrote:
10 > | Depending on the "definition" of visualisation and hence sci-vis
11 > | this category could also include
12 > |
13 > | sci-chemistry/pymol
14 > |
15 > | and possibly
16 > |
17 > | sci-chemistry/molden
18 > |
19 > | since both visualize molecules. Particularly pymol doesn't
20 > | seem to really fit in sci-chemistry since it is geared toward
21 > | biomolecules and could as well be in sci-biology. The same
22 > | will hold for vmd once I am done with the ebuild.
23 >
24 > Macromolecular graphics tools I really consider biochemistry, so they
25 > can go either way. But I more often hear biochemistry elongated as
26 > biological chemistry than chemical biology. So if forced to categorize
27 > one or the other, I lean toward chemistry.
28 >
29
30 Hi Donnie,
31
32 That sounds absolutely fine! Personally, I find it often
33 difficult to assign life science related tools to specific
34 categories. The boundaries between biology, chemistry,
35 biochemistry, or physics in the life sciences have become
36 fairly blury to me.
37
38 My point was mainly to say that once a sci-visualisation
39 category exists, users might expect to find tools like
40 pymol, vmd, etc. in there as opposed to sci-chemistry or
41 sci-biology.
42
43 best,
44 Markus
45
46 - --
47 Markus Dittrich (markusle)
48 Gentoo Linux Developer
49 Scientific applications
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58 gentoo-science@g.o mailing list

Replies

Subject Author
Re: [gentoo-science] Re: New category proposal - sci-vis Donnie Berkholz <spyderous@g.o>