Gentoo Archives: gentoo-science

From: "Sébastien Fabbro" <bicatali@g.o>
To: gentoo-science@l.g.o
Subject: Re: [gentoo-science] Cblas, Numpy, Scipy
Date: Wed, 28 Feb 2007 11:07:26
Message-Id: 45E5620D.4020600@gentoo.org
In Reply to: Re: [gentoo-science] Cblas, Numpy, Scipy by Bill Dandreta
1 Hi Bill,
2
3 Once again, please report on bugs.gentoo.org.
4
5 > I was trying to use acml to avoid compiling blas-atlas (it takes about 2
6 > hours and I don't really need it right now. Also numpy and scipy are not
7 > supposed to require it.
8
9 You can disable the USE flag lapack if you don't want to rely on
10 external cblas or lapack libraries on numpy. For scipy, as far as I
11 know, you need blas/lapack external libraries. If don't want to wait the
12 full ATLAS full compilation, you can emerge the
13 {blas,cblas,lapack}-reference. These are not as speed-optimized as
14 ATLAS, but a lot faster and more robust to build.
15 Make sure you have a cblas implementation supporting the eselect format,
16 as required by dev-python/numpy-1.0.1-r1.
17
18 > gcc -shared .libs/libatlas.la-3.o -lpthread
19 > /usr/lib/gcc/x86_64-pc-linux-gnu/4.1.1/32/libgfortran.so -Wl,-soname
20 > -Wl,libatlas.so.0 -o .libs/libatlas.so.0.0.0
21 > /usr/lib/gcc/x86_64-pc-linux-gnu/4.1.1/32/libgfortran.so: could not read
22 > symbols: File in wrong format
23 > collect2: ld returned 1 exit status
24 > libtool: install: `libatlas.la' is not a valid libtool archive
25
26
27 I can't reproduce your failing blas-atlas (which should be at least
28 blas-atlas-3.7.11-r1 for numpy-1.0.1-r1). It looks it mixes 32 and 64
29 profiles.
30 If it persists, once again, please file a bug regarding blas-atlas on
31 bugs.gentoo.org.
32
33 Sébastien
34 --
35 gentoo-science@g.o mailing list

Replies

Subject Author
Re: [gentoo-science] Cblas, Numpy, Scipy Bill Dandreta <wjdandreta@×××.net>