Gentoo Archives: gentoo-science

From: Christopher Schwan <cschwan@××××××××××××××××××.de>
To: gentoo-science@l.g.o
Subject: Re: [gentoo-science] Can not run sage-notebook
Date: Mon, 22 Aug 2011 08:56:50
Message-Id: 4310572.Ch0ui68j1t@cschwan-laptop
In Reply to: Re: [gentoo-science] Can not run sage-notebook by P Purkayastha
On Monday 22 August 2011 10:57:59 P Purkayastha wrote:
> On 08/22/2011 07:59 AM, fbissey@××××××××××××.nz wrote: > > Quoting P Purkayastha <ppurka@×××××.com>: > >> On 08/22/2011 06:48 AM, fbissey@××××××××××××.nz wrote: > >>> Quoting P Purkayastha <ppurka@×××××.com>: > >>>> Indeed cython was not rebuilt after/during the update of sage. > >>>> Rebuilding it doesn't make any difference. Still get the same > >>>> errors. > >>>> eix output just before remerging cython: > >>>> > >>>> [I] dev-python/cython > >>>> Available versions: 0.14.1 0.14.1-r1[1] {doc examples} > >>>> Installed versions: 0.14.1-r1[1](10:34:40 PM 08/05/2011)(-doc > >>>> -examples) > >>>> Homepage: http://www.cython.org/ > >>>> http://pypi.python.org/pypi/Cython > >>>> Description: The Cython compiler for writing C extensions > >>>> for the Python language > >>> > >>> Did you follow up with a rebuild of pynac, sage-clib and sage? > >>> > >>> Francois > >> > >> I haev tried rebuilding pynac, sage-clib, sage, sage-baselayout and > >> sage-notebook. The error persists. > >> > >> > >> ~> genlop -l --date 3 hours ago > >> * dev-python/cython > >> > >> Mon Aug 22 06:05:25 2011 >>> dev-python/cython-0.14.1-r1 > >> Mon Aug 22 06:56:32 2011 >>> sci-libs/pynac-0.2.3 > >> Mon Aug 22 06:56:58 2011 >>> sci-mathematics/sage-clib-4.7.1 > >> Mon Aug 22 07:09:34 2011 >>> sci-mathematics/sage-4.7.1 > >> Mon Aug 22 07:12:48 2011 >>> dev-lang/yasm-1.1.0-r1 > >> Mon Aug 22 07:14:55 2011 >>> sci-mathematics/sage-notebook-0.8.19 > >> Mon Aug 22 07:15:30 2011 >>> sci-mathematics/sage-baselayout-4.7.1 > >> ~> > > > > OK let's look at some other things: > > printenv | grep SAGE > > ~> env | grep SAGE > SAGE_DATA=/usr/share/sage/data > SAGE_DOC=/usr/share/sage/devel/sage/doc > SAGE_ROOT=/usr/share/sage > SAGE_LOCAL=/usr > > > eix ipython > > ~> eix ipython > [I] dev-python/ipython > Available versions: 0.10 0.10.1 0.10.2 {doc emacs examples > gnuplot readline smp test wxwidgets} > Installed versions: 0.10.2(02:29:03 AM 05/20/2011)(readline smp > -doc -emacs -examples -gnuplot -test -wxwidgets) > Homepage: http://ipython.scipy.org/ > http://pypi.python.org/pypi/ipython > Description: An interactive computing environment for Python > > > What is your current shell? > > /bin/zsh > Running > exec bash > sage > > doesn't make any difference. > > > Outout of "sage -gdb" if you installed with the debug useflag. > > Did you install the testsuite (useflag of the same name). > > Unfortunately, I didnt' compile either of them. Will do that later tonight. > > > Francois > > Thanks for patiently helping. :)
Hi, Francois was right - compiling without the testsuite yields the same behavior on my box. So for the time being, USE=testsuite emerge -1 sage-baselayout USE=testsuite emerge -1 sage solves the problem. Any ideas which files are removed with USE=-testsuite but still needed ? Cheers, Christopher

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Re: [gentoo-science] Can not run sage-notebook P Purkayastha <ppurka@×××××.com>