Gentoo Archives: gentoo-science

From: rose@××××××××××××××.de
To: gentoo-science@l.g.o
Subject: Re: [gentoo-science] sci-mathematics/sage-4.7.1-r2 still circumvents the installation of numpy > numpy-1.5.1
Date: Sun, 09 Oct 2011 23:21:47
Message-Id: 20111010012125.9fo894ks0048s0wg@webmail.uni-potsdam.de
In Reply to: Re: [gentoo-science] sci-mathematics/sage-4.7.1-r2 still circumvents the installation of numpy > numpy-1.5.1 by fbissey@slingshot.co.nz
1 Quoting fbissey@××××××××××××.nz:
2
3 > Quoting rose@××××××××××××××.de:
4 >
5 >> The installation of scipy-0.9.0-r2 is blocked by sage-4.7.1-r2,
6 >> because 'emerge scipy' fails if numpy-1.5.1 and not numpy-1.6.1-r1 is
7 >> installed. But the installation of numpy-1.6.1-r1 is blocked by
8 >> sage-4.7.1-r2:
9 >>
10 >> root@impala:/root(2)# emerge -pvuDN world
11 >> These are the packages that would be merged, in order:
12 >> Calculating dependencies... done!
13 >> [ebuild U ] sci-libs/scipy-0.9.0-r2 [0.9.0-r1] USE="doc -umfpack" 0 kB
14 >> Total: 1 package (1 upgrade), Size of downloads: 0 kB
15 >> WARNING: One or more updates have been skipped due to a dependency conflict:
16 >> dev-python/numpy:0
17 >> (dev-python/numpy-1.6.1-r1::gentoo, ebuild scheduled for merge)
18 >> conflicts with
19 >> ~dev-python/numpy-1.5.1 required by
20 >> (sci-mathematics/sage-4.7.1-r2::sage-on-gentoo, installed)
21 >> dev-python/pexpect:0
22 >> (dev-python/pexpect-2.4-r1::sage-on-gentoo, ebuild scheduled for
23 >> merge) conflicts with
24 >> ~dev-python/pexpect-2.0 required by
25 >> (sci-mathematics/sage-4.7.1-r2::sage-on-gentoo, installed)
26 >>
27 >> The restriction to numpy-1.5.1 was motivated with missing clapack_*
28 >> symbols corresonding to Bug
29 >> https://bugs.gentoo.org/show_bug.cgi?id=371099.
30 >>
31 >> But this issue seems to be solved now, comment 40 to Bug 371099.
32 >
33 > I am not sure I understand your email fully. scipy-0.9.0-r2 doesn't require
34 > numpy-1.6.1.
35 > Indeed you cannot upgrade numpy to 1.6.1 but that doesn't prevent the
36 > merging of
37 > anything. It is just a version constraint. It is unfortunate but that's
38 > the way
39 > it is.
40 >
41 > Do you absolutely need numpy-1.6 for something else than sage?
42 >
43 > Francois
44
45 Hi Francois,
46
47 it seems, that scipy-0.9.0-r2 fails to emerge if numpy-1.5.1 is
48 installed but it is emerged if numpy-1.6.1-r1, compare Bug 386269
49 https://bugs.gentoo.org/show_bug.cgi?id=386269 .
50
51 Regards Juergen

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