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To: gentoo-science@g.o
From: rose@...
Subject: 'emerge -vuND sage' fails due to issues with masking.
Date: Mon, 22 Aug 2011 11:29:34 +0200
'emerge -vuND sage' now fails for me with:

root@caiman:/root(61)# emerge -vuND sage

These are the packages that would be merged, in order:

Calculating dependencies... done!
[ebuild     U #] sci-mathematics/sage-baselayout-4.7.2_alpha1 [4.7.1]  
USE="X -debug -testsuite" 1,111 kB [1]
[ebuild     U  ] sci-mathematics/sage-extcode-4.7.2_alpha1 [4.7.1]  
11,894 kB [1]
[ebuild  N     ] sci-mathematics/pari-data-20110727  45,753 kB [0]
[ebuild     UD ] dev-python/pexpect-2.0 [2.4-r1] USE="(-doc%*)  
(-examples%*)" 0 kB [1]
[ebuild     UD ] dev-python/numpy-1.5.1 [1.6.1] USE="doc lapack -test"  
0 kB [0]
[ebuild     U  ] sci-mathematics/sage-notebook-0.8.20 [0.8.19]  
USE="java" 18,442 kB [1]
[ebuild  N     ] sci-mathematics/pari-2.5.0-r3  USE="X data doc fltk  
gmp" 2,651 kB [0]
[ebuild  N     ] dev-python/mpmath-0.17  USE="doc examples gmp  
-matplotlib -test" 0 kB [0]
[ebuild  N     ] sci-libs/flint-1.6  USE="doc ntl -test" 0 kB [1]
[ebuild  N    #] sci-mathematics/sage-doc-4.7.2_alpha1  USE="pdf  
-html" 53,162 kB [1]
[ebuild  N     ] sci-mathematics/eclib-20100711  USE="-pari24" 0 kB [1]
[ebuild  N    #] sci-mathematics/lcalc-1.23-r4  USE="pari" 0 kB [1]
[ebuild  N     ] dev-python/sympy-0.7.1  USE="doc examples gtk latex  
opengl pdf png texmacs -imaging -ipython -mathml -test" 0 kB [0]
[ebuild  N     ] sci-mathematics/sympow-1.018.1_p8-r1  USE="-pari24" 0 kB [1]
[ebuild  N     ] sci-mathematics/genus2reduction-0.3_p8-r1  0 kB [1]
[ebuild  N     ] dev-python/networkx-1.2  USE="examples" 0 kB [1]
[ebuild  N     ] dev-tex/sage-latex-2.2.5-r2  USE="examples" 0 kB [1]
[ebuild  N     ] sci-mathematics/polybori-0.7.1  USE="doc gd sage" 0 kB [1]
[ebuild  N    #] sci-mathematics/sage-clib-4.7.2_alpha1  0 kB [1]
[ebuild  N    #] sci-mathematics/sage-4.7.2_alpha1  USE="examples  
latex -mpc -testsuite" 0 kB [1]

Total: 20 packages (3 upgrades, 2 downgrades, 15 new), Size of  
downloads: 133,011 kB
Portage tree and overlays:
  [0] /usr/portage
  [1] /var/lib/layman/sage-on-gentoo

The following mask changes are necessary to proceed:
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /etc/portage/package.mask:
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
> =sci-mathematics/lcalc-1.23-r4
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
> =sci-mathematics/sage-clib-4.7.2_alpha1
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
> =sci-mathematics/sage-baselayout-4.7.2_alpha1
#required by sage (argument)
# /etc/portage/package.mask:
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
#required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
> =sci-mathematics/sage-4.7.2_alpha1
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /etc/portage/package.mask:
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
#required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
> =sci-mathematics/sage-doc-4.7.2_alpha1

But I think that I have just set this requested masking  
/etc/portage/package.maks:


root@caiman:/root(62)# cat /etc/portage/package.mask
> =dev-java/jgraphx-1.4.1.1
> =sci-libs/sprng-4.0
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
> =sci-mathematics/lcalc-1.23-r4
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
> =sci-mathematics/sage-clib-4.7.2_alpha1
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
> =sci-mathematics/sage-baselayout-4.7.2_alpha1
#required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
> =sci-mathematics/sage-4.7.2_alpha1
#required by sci-mathematics/sage-4.7.2_alpha1, required by sage (argument)
# /var/lib/layman/sage-on-gentoo/profiles/package.mask:
# preparing 4.7.2
> =sci-mathematics/sage-doc-4.7.2_alpha1

Any hint is apprecieated.





Replies:
Re: 'emerge -vuND sage' fails due to issues with masking.
-- Christopher Schwan
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