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On 5 oct. 10, at 09:24, Fabian Groffen wrote: |
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|
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> On 04-10-2010 15:49:00 +0200, Antoine Dechaume wrote: |
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>> Hi, |
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>> |
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>> I am not sure this problem is related to gentoo, sorry about that if |
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>> it happens to be unrelated... |
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>> |
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>> I have a C++ code linked to libxml2, and used through a python |
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>> wrapper, whenever I try to load the python module I get: |
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>> ImportError: /space/dechaume/prefix/usr/lib/libxml2.so.2: symbol |
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>> gzopen64, version ZLIB_1.2.3.3 not defined in file libz.so.1 with |
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>> link |
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>> time reference |
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> |
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> can you run the following commnds: |
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> % scanelf --needed /space/dechaume/prefix/usr/lib/libxml2.so.2 |
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> % scanelf --rpath /space/dechaume/prefix/usr/lib/libxml2.so.2 |
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> |
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> scanelf --needed /space/dechaume/prefix/usr/lib/libxml2.so.2 |
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TYPE NEEDED FILE |
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ET_DYN libdl.so.2,libz.so.1,libm.so.6,libc.so.6 /space/dechaume/prefix/ |
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usr/lib/libxml2.so.2 |
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|
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> scanelf --rpath /space/dechaume/prefix/usr/lib/libxml2.so.2 |
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TYPE RPATH FILE |
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ET_DYN /space/dechaume/prefix/usr/x86_64-pc-linux-gnu/lib/gcc:/space/ |
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dechaume/prefix/usr/x86_64-pc-linux-gnu/lib:/space/dechaume/prefix/usr/ |
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lib:/space/dechaume/prefix/lib /space/dechaume/prefix/usr/lib/ |
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libxml2.so.2 |
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|
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> also try to locate the python module that you include, and run the |
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> same |
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> commands on it. |
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> |
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> |
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|
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> scanelf --needed _FSDataManager.so |
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TYPE NEEDED FILE |
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ET_DYN |
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libFSCommon |
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.so |
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,libFSBoundaryCondition |
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.so |
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,libFSMesh |
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.so |
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,libFSDataLog |
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.so |
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,libFSRelationsModel |
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.so,libFSGeometry.so,libFSDataManager.so,libpthread.so.0,libdl.so. |
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2,libutil.so.1,libpython2.6.so.1.0,libmpi.so.0,libhdf5_hl.so. |
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0,libhdf5.so.0,libnetcdf.so.4,libcgns.so.2,libxml2.so.2,libparmetis.so. |
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2,libmetis.so.4,libdamas.so,libmutil.so,liberrare.so,libsda.so,libstdc+ |
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+.so.6,libm.so.6,libgcc_s.so.1,libc.so.6 _FSDataManager.so |
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|
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> scanelf --rpath _FSDataManager.so |
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TYPE RPATH FILE |
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ET_DYN /space/dechaume/prefix/usr/x86_64-pc-linux-gnu/lib/gcc:/space/ |
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dechaume/prefix/usr/x86_64-pc-linux-gnu/lib:/space/dechaume/prefix/usr/ |
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lib:/space/dechaume/prefix/lib _FSDataManager.so |
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|
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|
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Thanks, |
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Antoine. |
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|
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> -- |
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> Fabian Groffen |
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> Gentoo on a different level |
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> |
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