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In addition to changing the eselect files in the respective |
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${FILESDIR}:s--which I think is what the patches in the below mentioned |
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bug take core of--I cannot use blas-reference nor lapack-reference |
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without the attached patches for app-admin/eselect. |
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|
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multilib.bash.patch addresses what I'm pretty sure is a bug in eselect. |
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What, by the way, is the role of ld.so.conf in prefix? I fear |
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eselect's multilib.bash is susceptible to weirdness (non-emptyness?) in |
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ld.so.conf. |
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|
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skel.bash.patch looks odd to me, but I'm not sure how to fix it properly. |
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|
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These patches were taken against the installed files from the eselect |
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ebuild. Maybe I should have posted this to bugs.gentoo.org instead... |
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|
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// Cheers; Johan |
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|
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|
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On 07/14/09 14:15, Michael Yang wrote: |
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|
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> I successfully emerged dev-python/numpy-1.3.0 and |
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> dev-python/scipy-0.7.0 but only with a lot of re-working of |
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> blas/cblas/lapack to work with eselect properly. Without this, |
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> numpy/scipy will fail or link incorrectly to /usr/lib/ libraries. I |
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> wanted to share this to help other users and recommend the following |
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> changes to the prefix overlay: |
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> |
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> * unmask and patch sci-libs/cblas-reference |
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> * patch sci-libs/blas-reference |
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> * patch sci-libs/lapack-reference |
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> (see gentoo bug #277849 for patches) |
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> * unmask virtual/cblas (required by scipy and numpy w/ USE=lapack) |
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> |
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> to emerge scipy I still needed to point to the BLAS/LAPACK libraries |
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> $ env BLAS=${EPREFIX}/usr/lib LAPACK=${EPREFIX}/usr/lib emerge scipy |
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> |
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> or else the scipy build fails with warnings.warn(BlasNotFoundError.__doc__) |
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> |
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> On Sun, Jul 12, 2009 at 4:49 PM, Aaron Wilson<tallest@×××××.com> wrote: |
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>> I've installed goto-blas, cblas-reference, and lapack-reference by pulling |
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>> the ebuilds into my overlay. I did not install virtual/cblas, and I do not |
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>> use any of the eselct packages (they're installed, but 'eselect blas list' |
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>> gives nothing). It would be nice to have these features working, perhaps |
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>> I'll try to poke around and see what's gong wrong. |
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>> |
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>> Aaron |
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>> |
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>> |
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>> On Jul 11, 2009, at 11:11 AM, Michael Yang wrote: |
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>> |
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>>> Hi guys, |
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>>> |
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>>> I'm trying to install sci-libas/scipy which depends on virtual/cblas |
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>>> and virtual/lapack. I noticed that virtual/cblas is not in the prefix |
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>>> overlay, so I used ecopy to try to emerge it myself. Emerge was |
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>>> successful, but I ran into lapack problems since "eselect blas set 1" |
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>>> doesn't seem to be prefix-aware and tries to make symbolic links in |
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>>> /usr/lib and /usr/lib/pkgconfig rather than ${EPREFIX}/usr/lib and |
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>>> ${EPREFIX}/usr/lib/pkgconfig. See gentoo bug #277447 for more detail. |
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>>> |
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>>> General question: am I missing something or does the prefix overlay |
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>>> not support blas/cblas/atlas yet? |
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