Gentoo Archives: gentoo-cluster

From: Eric Thibodeau <kyron@××××××××.com>
To: gentoo-cluster@l.g.o
Cc: gentoo-science@l.g.o
Subject: Re: [gentoo-cluster] hdf5 with mpi support
Date: Mon, 09 Jun 2008 20:57:19
Message-Id: 484D992E.3020109@neuralbs.com
In Reply to: [gentoo-cluster] hdf5 with mpi support by "de Almeida
1 IIRC, I have successfully built HDF5 with openmpi more than 1.5yrs ago
2 (albeit, all manually installed). There is no reason for it not to work now.
3
4 Eric
5
6 de Almeida, Valmor F. wrote:
7 > Hello,
8 >
9 > Emerging hdf5 with mpi support requires mpich2 as default(?). Is it
10 > possible to install hdf5 with my own local install of openmpi?
11 >
12 > Alternatively, if I install the masked version (x86) of openmpi, would
13 > hdf5 (with mpi) use openmpi?
14 >
15 > Thanks,
16 >
17 > --
18 > Valmor
19 >
20 >
21 >
22 > ->USE="mpi hlapi szip" emerge -vp hdf5
23 >
24 > These are the packages that would be merged, in order:
25 >
26 > Calculating dependencies... done!
27 > [ebuild N ] sys-cluster/mpich2-1.0.3 USE="crypt doc -cxx -debug
28 > -mpe -threads" 11,882 kB
29 > [ebuild R ] sci-libs/hdf5-1.6.4 USE="hlapi* mpi* ssl static szip*
30 > zlib -debug -threads" 0 kB
31 >
32 > Total: 2 packages (1 new, 1 reinstall), Size of downloads: 11,882 kB
33 >
34 > -----------------------------------------------------------------
35 >
36 > ->emerge --search openmpi
37 > Searching...
38 > [ Results for search key : openmpi ]
39 > [ Applications found : 1 ]
40 >
41 > * sys-cluster/openmpi [ Masked ]
42 > Latest version available: 1.2.6-r1
43 > Latest version installed: [ Not Installed ]
44 > Size of files: 3,473 kB
45 > Homepage: http://www.open-mpi.org
46 > Description: A high-performance message passing library (MPI)
47 > License: BSD
48 >
49 >
50
51 --
52 gentoo-cluster@l.g.o mailing list

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RE: [gentoo-cluster] hdf5 with mpi support "de Almeida