[gentoo-commits] proj/sci:master commit in: sci-biology/nilearn/

[Horea Christian]

commit:     9027d0232f481c090e41e26a544da60a2ea7eec4
Author:     Horea Christian <horea.christ <AT> yandex <DOT> com>
AuthorDate: Thu Aug  2 17:41:54 2018 +0000
Commit:     Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Thu Aug  2 17:41:54 2018 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=9027d023

sci-biology/nilearn: version bump

Package-Manager: Portage-2.3.44, Repoman-2.3.10

 sci-biology/nilearn/nilearn-0.4.2.ebuild | 51 ++++++++++++++++++++++++++++++++
 1 file changed, 51 insertions(+)

diff --git a/sci-biology/nilearn/nilearn-0.4.2.ebuild b/sci-biology/nilearn/nilearn-0.4.2.ebuild
new file mode 100644
index 000000000..87226eec3
--- /dev/null
+++ b/sci-biology/nilearn/nilearn-0.4.2.ebuild
@@ -0,0 +1,51 @@
+# Copyright 1999-2018 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+PYTHON_COMPAT=( python{2_7,3_4,3_5,3_6} )
+
+inherit distutils-r1
+
+DESCRIPTION="Fast and easy statistical learning on NeuroImaging data"
+HOMEPAGE="http://nilearn.github.io/"
+SRC_URI="https://github.com/nilearn/nilearn/archive/${PV}.tar.gz -> ${P}.tar.gz"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="+plot test"
+
+DEPEND="
+	test? (
+		${RDEPEND}
+		dev-python/nose[${PYTHON_USEDEP}]
+		)
+	dev-python/setuptools[${PYTHON_USEDEP}]
+	"
+RDEPEND="
+	dev-python/joblib[${PYTHON_USEDEP}]
+	dev-python/numpy[${PYTHON_USEDEP}]
+	sci-libs/scikits_learn[${PYTHON_USEDEP}]
+	sci-libs/scipy[${PYTHON_USEDEP}]
+	sci-libs/nibabel[${PYTHON_USEDEP}]
+	plot? ( dev-python/matplotlib[${PYTHON_USEDEP}] )"
+
+# upstream is reluctant to *not* depend on bundled scikits_learn:
+# https://github.com/nilearn/nilearn/pull/1398
+python_prepare_all() {
+	local f
+	for f in nilearn/{*/*/,*/,}*.py; do
+		sed -r \
+			-e '/^from/s/(sklearn|\.|)\.externals\.joblib/joblib/' \
+			-e 's/from (sklearn|\.|)\.externals import/import/' \
+		-i $f || die
+	done
+
+	distutils-r1_python_prepare_all
+}
+
+python_test() {
+	echo "backend: Agg" > matplotlibrc
+	MPLCONFIGDIR=. nosetests -v || die
+}