[gentoo-commits] proj/sci:master commit in: sci-biology/TransDecoder/

[Marius Brehler]

commit:     f08c7474c8fed99cd2614babe0ea5462f31752ae
Author:     Marius Brehler <marbre <AT> linux <DOT> sungazer <DOT> de>
AuthorDate: Fri Dec 25 20:47:28 2015 +0000
Commit:     Marius Brehler <marbre <AT> linux <DOT> sungazer <DOT> de>
CommitDate: Fri Dec 25 20:47:28 2015 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=f08c7474

sci-biology/TransDecoder: Fix minorsyn, add missing die

Package-Manager: portage-2.2.24

 sci-biology/TransDecoder/ChangeLog                 | 4 ++++
 sci-biology/TransDecoder/TransDecoder-2.0.1.ebuild | 4 ++--
 2 files changed, 6 insertions(+), 2 deletions(-)

diff --git a/sci-biology/TransDecoder/ChangeLog b/sci-biology/TransDecoder/ChangeLog
index ee19193..e9110b4 100644
--- a/sci-biology/TransDecoder/ChangeLog
+++ b/sci-biology/TransDecoder/ChangeLog
@@ -2,6 +2,10 @@
 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
 # $Id$
 
+  25 Dec 2015; Marius Brehler <marbre@××××××××××××××.de>
+  TransDecoder-2.0.1.ebuild:
+  sci-biology/TransDecoder: Fix minorsyn, add missing die
+
   19 Nov 2015; Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
   TransDecoder-2.0.1.ebuild:
   sci-biology/TransDecoder: note that Pfam-AB was discontinued

diff --git a/sci-biology/TransDecoder/TransDecoder-2.0.1.ebuild b/sci-biology/TransDecoder/TransDecoder-2.0.1.ebuild
index 113c915..dfe3fbb 100644
--- a/sci-biology/TransDecoder/TransDecoder-2.0.1.ebuild
+++ b/sci-biology/TransDecoder/TransDecoder-2.0.1.ebuild
@@ -15,7 +15,7 @@ if [ "$PV" == "9999" ]; then
 	EGIT_REPO_URI="https://github.com/TransDecoder/TransDecoder.git"
 	KEYWORDS=""
 else
-    SRC_URI="https://github.com/TransDecoder/TransDecoder/archive/"${PV}".tar.gz -> ${P}.tar.gz"
+	SRC_URI="https://github.com/TransDecoder/TransDecoder/archive/"${PV}".tar.gz -> ${P}.tar.gz"
 	KEYWORDS="~amd64"
 	S="${WORKDIR}"/TransDecoder-"${PV}"
 fi
@@ -34,7 +34,7 @@ src_prepare(){
 	rm -rf transdecoder_plugins/cd-hit
 	for f in PerlLib/*.pm; do
 		p=`basename $f .pm`;
-		sed -e "s#use $p;#use TransDecoder::$p;#" -i PerlLib/*.pm util/*.pl TransDecoder.LongOrfs TransDecoder.Predict;
+		sed -e "s#use $p;#use TransDecoder::$p;#" -i PerlLib/*.pm util/*.pl TransDecoder.LongOrfs TransDecoder.Predict || die;
 	done
 	epatch "${FILESDIR}"/"${P}"__fix_paths.patch
 	epatch "${FILESDIR}"/pfam_runner.pl.patch