Gentoo Archives: gentoo-commits

From: "Justin Lecher (jlec)" <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-chemistry/tm-align: tm-align-20140601.ebuild ChangeLog tm-align-20120124.ebuild tm-align-20120707.ebuild
Date: Sun, 29 Mar 2015 13:15:59
Message-Id: 20150329131557.0515D14C6D@oystercatcher.gentoo.org
1 jlec 15/03/29 13:15:57
2
3 Modified: ChangeLog
4 Added: tm-align-20140601.ebuild
5 Removed: tm-align-20120124.ebuild tm-align-20120707.ebuild
6 Log:
7 Version Bump; drop old
8
9 (Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key B9D4F231BD1558AB!)
10
11 Revision Changes Path
12 1.8 sci-chemistry/tm-align/ChangeLog
13
14 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/tm-align/ChangeLog?rev=1.8&view=markup
15 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/tm-align/ChangeLog?rev=1.8&content-type=text/plain
16 diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/tm-align/ChangeLog?r1=1.7&r2=1.8
17
18 Index: ChangeLog
19 ===================================================================
20 RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/tm-align/ChangeLog,v
21 retrieving revision 1.7
22 retrieving revision 1.8
23 diff -u -r1.7 -r1.8
24 --- ChangeLog 9 Feb 2015 12:49:24 -0000 1.7
25 +++ ChangeLog 29 Mar 2015 13:15:56 -0000 1.8
26 @@ -1,6 +1,12 @@
27 # ChangeLog for sci-chemistry/tm-align
28 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
29 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/tm-align/ChangeLog,v 1.7 2015/02/09 12:49:24 blueness Exp $
30 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/tm-align/ChangeLog,v 1.8 2015/03/29 13:15:56 jlec Exp $
31 +
32 +*tm-align-20140601 (29 Mar 2015)
33 +
34 + 29 Mar 2015; Justin Lecher <jlec@g.o> +tm-align-20140601.ebuild,
35 + -tm-align-20120124.ebuild, -tm-align-20120707.ebuild:
36 + Version Bump; drop old
37
38 09 Feb 2015; Anthony G. Basile <blueness@g.o> tm-align-20120707.ebuild,
39 tm-align-20130511.ebuild:
40
41
42
43 1.1 sci-chemistry/tm-align/tm-align-20140601.ebuild
44
45 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/tm-align/tm-align-20140601.ebuild?rev=1.1&view=markup
46 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/tm-align/tm-align-20140601.ebuild?rev=1.1&content-type=text/plain
47
48 Index: tm-align-20140601.ebuild
49 ===================================================================
50 # Copyright 1999-2015 Gentoo Foundation
51 # Distributed under the terms of the GNU General Public License v2
52 # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/tm-align/tm-align-20140601.ebuild,v 1.1 2015/03/29 13:15:56 jlec Exp $
53
54 EAPI=5
55
56 inherit cmake-utils flag-o-matic fortran-2
57
58 DESCRIPTION="Quick & Accurate Structural Alignment"
59 HOMEPAGE="http://zhanglab.ccmb.med.umich.edu/TM-align/"
60 SRC_URI="http://zhanglab.ccmb.med.umich.edu/TM-align/TMtools${PV}.tar.gz"
61
62 LICENSE="tm-align"
63 SLOT="0"
64 KEYWORDS="~amd64 ~ppc ~ppc64 ~x86 ~amd64-linux ~x86-linux"
65 IUSE="static custom-cflags"
66
67 S="${WORKDIR}"
68
69 src_prepare() {
70 cp "${FILESDIR}"/CMakeLists.txt . || die
71 use static && append-fflags -static && append-ldflags -static
72 # recommended by upstream
73 use custom-cflags || replace-flags -O* -O3 && append-fflags -ffast-math
74 }