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commit: ab81c954929bf42695635e178814e48bdf053ba9 |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Tue May 3 16:29:07 2016 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Tue May 3 16:29:07 2016 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=ab81c954 |
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|
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sci-biology/prot4EST: add more DEPS, cleanup |
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|
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Package-Manager: portage-2.2.28 |
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|
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sci-biology/prot4EST/prot4EST-3.1b.ebuild | 17 ++++++++--------- |
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1 file changed, 8 insertions(+), 9 deletions(-) |
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|
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diff --git a/sci-biology/prot4EST/prot4EST-3.1b.ebuild b/sci-biology/prot4EST/prot4EST-3.1b.ebuild |
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index d4528a6..ea30cf4 100644 |
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--- a/sci-biology/prot4EST/prot4EST-3.1b.ebuild |
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+++ b/sci-biology/prot4EST/prot4EST-3.1b.ebuild |
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@@ -1,4 +1,4 @@ |
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-# Copyright 1999-2014 Gentoo Foundation |
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+# Copyright 1999-2016 Gentoo Foundation |
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# Distributed under the terms of the GNU General Public License v2 |
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# $Id$ |
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|
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@@ -6,11 +6,11 @@ EAPI=5 |
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|
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inherit perl-module |
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|
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-DESCRIPTION="Predict proteins from EST sequences overcoming errors in ORFs" |
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-HOMEPAGE="http://www.compsysbio.org/lab/?q=prot4EST" |
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+DESCRIPTION="Predict proteins from EST sequences overcoming frameshifts" |
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+HOMEPAGE="http://www.compsysbio.org/lab/?q=prot4EST |
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+ http://www.biomedcentral.com/1471-2105/5/187" |
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SRC_URI="http://www.compsysbio.org/lab/james/prot4EST_rl3.1b.tgz" |
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|
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-#http://www.biomedcentral.com/1471-2105/5/187 |
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LICENSE="GPL-1" |
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SLOT="0" |
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KEYWORDS="" |
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@@ -19,19 +19,18 @@ IUSE="" |
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DEPEND="sci-biology/emboss |
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sci-biology/estscan |
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sci-biology/bioperl |
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+ sci-biology/ncbi-tools |
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virtual/perl-File-Path |
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virtual/perl-Getopt-Long |
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dev-perl/Statistics-Descriptive |
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- dev-perl/Tie-IxHash" |
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- #dev-perl/Algorithm-Loops |
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- #dev-perl/File-Copy |
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- |
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+ dev-perl/Tie-IxHash |
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+ dev-perl/Algorithm-Loops" |
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RDEPEND="${DEPEND}" |
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|
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S="${WORKDIR}"/"p4e3.1b" |
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|
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src_install(){ |
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- mydoc="README" |
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+ mydoc="README INSTALL" |
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perl-module_src_install |
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mv bin/prot4EST*.pl bin/prot4EST.pl |
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dobin bin/*.pl |
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