[gentoo-commits] gentoo-x86 commit in sci-biology/dialign-tx: ChangeLog dialign-tx-1.0.2-r1.ebuild

[Kacper Kowalik (xarthisius)]

xarthisius    10/09/09 09:36:17

  Modified:             ChangeLog
  Added:                dialign-tx-1.0.2-r1.ebuild
  Log:
  Respect LDFLAGS wrt bug 336533. Thanks to Diego for the report. Fix implicit function declarations.
  
  (Portage version: 2.2_rc77/cvs/Linux x86_64)

Revision  Changes    Path
1.4                  sci-biology/dialign-tx/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/dialign-tx/ChangeLog?rev=1.4&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/dialign-tx/ChangeLog?rev=1.4&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/dialign-tx/ChangeLog?r1=1.3&r2=1.4

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/dialign-tx/ChangeLog,v
retrieving revision 1.3
retrieving revision 1.4
diff -u -r1.3 -r1.4
--- ChangeLog	9 Feb 2010 11:20:45 -0000	1.3
+++ ChangeLog	9 Sep 2010 09:36:17 -0000	1.4
@@ -1,6 +1,13 @@
 # ChangeLog for sci-biology/dialign-tx
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/dialign-tx/ChangeLog,v 1.3 2010/02/09 11:20:45 pacho Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/dialign-tx/ChangeLog,v 1.4 2010/09/09 09:36:17 xarthisius Exp $
+
+*dialign-tx-1.0.2-r1 (09 Sep 2010)
+
+  09 Sep 2010; Kacper Kowalik <xarthisius@g.o>
+  +dialign-tx-1.0.2-r1.ebuild, +files/dialign-tx-1.0.2-implicits.patch:
+  Respect LDFLAGS wrt bug 336533. Thanks to Diego for the report. Fix
+  implicit function declarations.
 
   09 Feb 2010; Pacho Ramos <pacho@g.o> dialign-tx-1.0.2.ebuild:
   amd64 stable, bug 298774



1.1                  sci-biology/dialign-tx/dialign-tx-1.0.2-r1.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/dialign-tx/dialign-tx-1.0.2-r1.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/dialign-tx/dialign-tx-1.0.2-r1.ebuild?rev=1.1&content-type=text/plain

Index: dialign-tx-1.0.2-r1.ebuild
===================================================================
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/dialign-tx/dialign-tx-1.0.2-r1.ebuild,v 1.1 2010/09/09 09:36:17 xarthisius Exp $

EAPI=2

inherit eutils multilib toolchain-funcs

MY_P=DIALIGN-TX_${PV}

DESCRIPTION="Greedy and progressive approaches for segment-based multiple sequence alignment"
HOMEPAGE="http://dialign-tx.gobics.de/"
SRC_URI="http://dialign-tx.gobics.de/${MY_P}.tar.gz"

LICENSE="LGPL-2.1"
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE=""

S=${WORKDIR}/${MY_P}

src_prepare() {
	sed -e "s/\$(CC) -o/\$(CC) \$(LDFLAGS) -o/" \
		-i source/Makefile || die #336533
	epatch "${FILESDIR}"/${P}-implicits.patch
}

src_compile() {
	emake -C source clean
	emake -C source CC="$(tc-getCC)" \
		CPPFLAGS=""	|| die "make failed"
}

src_install() {
	DESTTREE="/usr" dobin "${S}"/source/dialign-tx
	insinto /usr/$(get_libdir)/${PN}/conf
	doins "${S}"/conf/*
}

pkg_postinst() {
	einfo "The configuration directory is"
	einfo "${ROOT}usr/$(get_libdir)/${PN}/conf"
	einfo "You will need to pass this to ${PN} on every run."
}