Gentoo Archives: gentoo-commits

From: Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/trim_galore/
Date: Sat, 30 May 2015 17:58:51
Message-Id: 1433008663.c254c619a4bbd10dadb401faa5ed80e51d3300e2.mmokrejs@gentoo
1 commit: c254c619a4bbd10dadb401faa5ed80e51d3300e2
2 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
3 AuthorDate: Sat May 30 17:57:43 2015 +0000
4 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
5 CommitDate: Sat May 30 17:57:43 2015 +0000
6 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=c254c619
7
8 sci-biology/trim_galore: version bump; ajusted S variable to match current upstream's packaging habit; still needs fastqc package to be finished
9
10 Package-Manager: portage-2.2.18
11
12 sci-biology/trim_galore/ChangeLog | 7 +++++++
13 .../{trim_galore-0.3.7.ebuild => trim_galore-0.4.0.ebuild} | 5 ++---
14 2 files changed, 9 insertions(+), 3 deletions(-)
15
16 diff --git a/sci-biology/trim_galore/ChangeLog b/sci-biology/trim_galore/ChangeLog
17 index e87a544..6cb3dfe 100644
18 --- a/sci-biology/trim_galore/ChangeLog
19 +++ b/sci-biology/trim_galore/ChangeLog
20 @@ -2,6 +2,13 @@
21 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
22 # $Header: $
23
24 +*trim_galore-0.4.0 (30 May 2015)
25 +
26 + 30 May 2015; Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
27 + +trim_galore-0.4.0.ebuild, -trim_galore-0.3.7.ebuild:
28 + sci-biology/trim_galore: version bump; ajusted S variable to match current
29 + upstream's packaging habit; still needs fastqc package to be finished
30 +
31 *trim_galore-0.3.7 (24 Feb 2015)
32
33 24 Feb 2015; Martin Mokrejs <mmokrejs@×××××××××××××××.cz>
34
35 diff --git a/sci-biology/trim_galore/trim_galore-0.3.7.ebuild b/sci-biology/trim_galore/trim_galore-0.4.0.ebuild
36 similarity index 89%
37 rename from sci-biology/trim_galore/trim_galore-0.3.7.ebuild
38 rename to sci-biology/trim_galore/trim_galore-0.4.0.ebuild
39 index 4a0c4bd..f27f48a 100644
40 --- a/sci-biology/trim_galore/trim_galore-0.3.7.ebuild
41 +++ b/sci-biology/trim_galore/trim_galore-0.4.0.ebuild
42 @@ -6,8 +6,7 @@ EAPI=5
43
44 DESCRIPTION="Perl wrapper around Cutadapt and FastQC to adapter and quality trimming"
45 HOMEPAGE="http://www.bioinformatics.babraham.ac.uk/projects/trim_galore"
46 -SRC_URI="http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/trim_galore_v"${PV}".zip"
47 -
48 +SRC_URI="http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/trim_galore_v${PV}.zip"
49 LICENSE="GPL-3"
50 SLOT="0"
51 KEYWORDS=""
52 @@ -20,7 +19,7 @@ RDEPEND="
53 sci-biology/fastqc
54 ${DEPEND}"
55
56 -S="${WORKDIR}"/trim_galore_zip
57 +S="${WORKDIR}"
58
59 src_install(){
60 dobin trim_galore