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commit: d0ba0e33274628d86bfa3ace5efc31c0821487cd |
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Author: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org> |
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AuthorDate: Tue Oct 29 09:09:25 2019 +0000 |
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Commit: Alexey Shvetsov <alexxy <AT> gentoo <DOT> org> |
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CommitDate: Tue Oct 29 09:09:25 2019 +0000 |
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URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=d0ba0e33 |
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|
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sci-chemistry/MotionCor2: Add motioncor2 |
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|
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Package-Manager: Portage-2.3.78, Repoman-2.3.17 |
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Signed-off-by: Alexey Shvetsov <alexxy <AT> gentoo.org> |
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|
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sci-chemistry/MotionCor2/MotionCor2-1.2.6.ebuild | 49 ++++++++++++++++++++++++ |
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sci-chemistry/MotionCor2/metadata.xml | 16 ++++++++ |
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2 files changed, 65 insertions(+) |
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|
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diff --git a/sci-chemistry/MotionCor2/MotionCor2-1.2.6.ebuild b/sci-chemistry/MotionCor2/MotionCor2-1.2.6.ebuild |
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new file mode 100644 |
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index 000000000..8fae639a3 |
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--- /dev/null |
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+++ b/sci-chemistry/MotionCor2/MotionCor2-1.2.6.ebuild |
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@@ -0,0 +1,49 @@ |
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+# Copyright 2019 Gentoo Authors |
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+# Distributed under the terms of the GNU General Public License v2 |
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+ |
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+EAPI=7 |
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+ |
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+DESCRIPTION="Correction of electron beam-induced sample motion" |
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+HOMEPAGE="https://emcore.ucsf.edu/ucsf-motioncor2" |
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+SRC_URI="${PN}_${PV}.zip" |
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+ |
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+LICENSE="UCSF-Motioncor2" |
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+SLOT="0" |
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+KEYWORDS="~amd64" |
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+IUSE="cuda92 +cuda101" |
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+ |
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+DEPEND=" |
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+ cuda92? ( =dev-util/nvidia-cuda-toolkit-9.2* ) |
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+ cuda101? ( =dev-util/nvidia-cuda-toolkit-10.1* ) |
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+ media-libs/tiff |
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+ app-arch/xz-utils |
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+ || ( media-libs/jpeg:62 media-libs/libjpeg-turbo ) |
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+" |
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+RDEPEND="${DEPEND}" |
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+BDEPEND="" |
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+ |
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+REQUIRED_USE="^^ ( cuda92 cuda101 )" |
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+ |
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+RESTRICT="fetch" |
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+VERSION="MotionCor2 v1.2.6 (05-22.2019, Linux) now Cuda v8.0,9.2,10.1" |
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+ |
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+S="${WORKDIR}" |
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+ |
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+pkg_nofetch() { |
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+ echo |
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+ elog "Please download ${PN}_${PV}.zip from" |
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+ elog "${HOMEPAGE}." |
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+ elog "Be sure to select the version ${VERSION} tarball!!" |
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+ elog "Then move the tarball to" |
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+ elog "${DISTDIR}/${P}.tar.gz" |
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+ echo |
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+} |
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+ |
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+src_install() { |
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+ dodoc MotionCor2-UserManual-09-13-2018.pdf |
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+ if use cuda92; then |
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+ newbin MotionCor2_1.2.6-Cuda92 ${PN} |
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+ elif use cuda101; then |
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+ newbin MotionCor2_1.2.6-Cuda101 ${PN} |
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+ fi |
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+} |
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|
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diff --git a/sci-chemistry/MotionCor2/metadata.xml b/sci-chemistry/MotionCor2/metadata.xml |
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new file mode 100644 |
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index 000000000..75c4f5d9f |
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--- /dev/null |
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+++ b/sci-chemistry/MotionCor2/metadata.xml |
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@@ -0,0 +1,16 @@ |
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+<?xml version="1.0" encoding="UTF-8"?> |
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+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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+<pkgmetadata> |
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+ <maintainer type="project"> |
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+ <email>sci-chemistry@g.o</email> |
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+ <name>Gentoo Chemistry Project</name> |
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+ </maintainer> |
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+ <maintainer type="person"> |
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+ <email>alexxy@g.o</email> |
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+ <name>Alexey Shvetsov</name> |
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+ </maintainer> |
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+ <use> |
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+ <flag name="cuda92">Install cuda-9.2 version</flag> |
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+ <flag name="cuda101">Install cuda-10.1 version</flag> |
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+ </use> |
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+</pkgmetadata> |
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