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| From: | "Markus Dittrich (markusle)" <markusle@g.o> |
|---|---|
| To: | gentoo-commits@l.g.o |
| Subject: | [gentoo-commits] gentoo-x86 commit in sci-biology/probcons: ChangeLog probcons-1.12.ebuild |
| Date: | Sat, 06 Oct 2007 11:29:26 |
| Message-Id: | E1Ie7hS-0005gI-7V@stork.gentoo.org |
| 1 | markusle 07/10/06 11:20:02 |
| 2 | |
| 3 | Modified: ChangeLog |
| 4 | Added: probcons-1.12.ebuild |
| 5 | Log: |
| 6 | New version (fixes bug #191874). |
| 7 | (Portage version: 2.1.3.11) |
| 8 | |
| 9 | Revision Changes Path |
| 10 | 1.6 sci-biology/probcons/ChangeLog |
| 11 | |
| 12 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/probcons/ChangeLog?rev=1.6&view=markup |
| 13 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/probcons/ChangeLog?rev=1.6&content-type=text/plain |
| 14 | diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/probcons/ChangeLog?r1=1.5&r2=1.6 |
| 15 | |
| 16 | Index: ChangeLog |
| 17 | =================================================================== |
| 18 | RCS file: /var/cvsroot/gentoo-x86/sci-biology/probcons/ChangeLog,v |
| 19 | retrieving revision 1.5 |
| 20 | retrieving revision 1.6 |
| 21 | diff -u -r1.5 -r1.6 |
| 22 | --- ChangeLog 22 Feb 2007 01:28:37 -0000 1.5 |
| 23 | +++ ChangeLog 6 Oct 2007 11:20:01 -0000 1.6 |
| 24 | @@ -1,6 +1,11 @@ |
| 25 | # ChangeLog for sci-biology/probcons |
| 26 | # Copyright 1999-2007 Gentoo Foundation; Distributed under the GPL v2 |
| 27 | -# $Header: /var/cvsroot/gentoo-x86/sci-biology/probcons/ChangeLog,v 1.5 2007/02/22 01:28:37 jokey Exp $ |
| 28 | +# $Header: /var/cvsroot/gentoo-x86/sci-biology/probcons/ChangeLog,v 1.6 2007/10/06 11:20:01 markusle Exp $ |
| 29 | + |
| 30 | +*probcons-1.12 (06 Oct 2007) |
| 31 | + |
| 32 | + 06 Oct 2007; Markus Dittrich <markusle@g.o> +files/probcons-1.12-cxxflags.patch, +probcons-1.12.ebuild: |
| 33 | + New version (fixes bug #191874). |
| 34 | |
| 35 | 22 Feb 2007; Markus Ullmann <jokey@g.o> ChangeLog: |
| 36 | Redigest for Manifest2 |
| 37 | |
| 38 | |
| 39 | |
| 40 | 1.1 sci-biology/probcons/probcons-1.12.ebuild |
| 41 | |
| 42 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/probcons/probcons-1.12.ebuild?rev=1.1&view=markup |
| 43 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/probcons/probcons-1.12.ebuild?rev=1.1&content-type=text/plain |
| 44 | |
| 45 | Index: probcons-1.12.ebuild |
| 46 | =================================================================== |
| 47 | # Copyright 1999-2007 Gentoo Foundation |
| 48 | # Distributed under the terms of the GNU General Public License v2 |
| 49 | # $Header: /var/cvsroot/gentoo-x86/sci-biology/probcons/probcons-1.12.ebuild,v 1.1 2007/10/06 11:20:01 markusle Exp $ |
| 50 | |
| 51 | inherit eutils toolchain-funcs |
| 52 | |
| 53 | MY_P="${PN}_v${PV/./_}" |
| 54 | DESCRIPTION="Probabilistic Consistency-based Multiple Alignment of Amino Acid Sequences" |
| 55 | HOMEPAGE="http://probcons.stanford.edu/" |
| 56 | SRC_URI="http://probcons.stanford.edu/${MY_P}.tar.gz" |
| 57 | LICENSE="public-domain" |
| 58 | SLOT="0" |
| 59 | KEYWORDS="~x86" |
| 60 | IUSE="" |
| 61 | # Gnuplot is explicitly runtime-only, it's run using system() |
| 62 | RDEPEND="sci-visualization/gnuplot" |
| 63 | DEPEND="" |
| 64 | S="${WORKDIR}/${PN}" |
| 65 | |
| 66 | src_unpack() { |
| 67 | unpack ${A} |
| 68 | epatch ${FILESDIR}/${P}-cxxflags.patch |
| 69 | } |
| 70 | |
| 71 | src_compile() { |
| 72 | emake \ |
| 73 | CXX="$(tc-getCXX)" \ |
| 74 | OPT_CXXFLAGS="${CXXFLAGS}" \ |
| 75 | || die "make failed" |
| 76 | } |
| 77 | |
| 78 | src_install() { |
| 79 | DESTTREE="/usr" dobin probcons project makegnuplot |
| 80 | # Overlap with imagemagick |
| 81 | DESTTREE="/usr" newbin compare compare-probcons |
| 82 | dodoc README |
| 83 | } |
| 84 | |
| 85 | pkg_postinst() { |
| 86 | ewarn "The 'compare' binary is installed as 'compare-probcons'" |
| 87 | ewarn "to avoid overlap with other packages." |
| 88 | einfo "You may also want to download the user manual" |
| 89 | einfo "from http://probcons.stanford.edu/manual.pdf" |
| 90 | } |
| 91 | |
| 92 | |
| 93 | |
| 94 | -- |
| 95 | gentoo-commits@g.o mailing list |