Gentoo Archives: gentoo-commits

From: "Justin Lecher (jlec)" <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-biology/bamtools/files: bamtools-2.2.3-unbundle.patch
Date: Mon, 28 Jan 2013 08:35:09
Message-Id: 20130128083506.8BE9B20081@flycatcher.gentoo.org
1 jlec 13/01/28 08:35:06
2
3 Added: bamtools-2.2.3-unbundle.patch
4 Log:
5 sci-biology/bamtools: Version Bump; #452234; unbundles dev-libs/jsoncpp
6
7 (Portage version: 2.2.0_alpha161/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
8
9 Revision Changes Path
10 1.1 sci-biology/bamtools/files/bamtools-2.2.3-unbundle.patch
11
12 file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/files/bamtools-2.2.3-unbundle.patch?rev=1.1&view=markup
13 plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/bamtools/files/bamtools-2.2.3-unbundle.patch?rev=1.1&content-type=text/plain
14
15 Index: bamtools-2.2.3-unbundle.patch
16 ===================================================================
17 src/CMakeLists.txt | 1 -
18 src/api/CMakeLists.txt | 4 ++--
19 src/toolkit/bamtools_filter.cpp | 2 +-
20 3 files changed, 3 insertions(+), 4 deletions(-)
21
22 diff --git a/src/CMakeLists.txt b/src/CMakeLists.txt
23 index e359695..2bd2185 100644
24 --- a/src/CMakeLists.txt
25 +++ b/src/CMakeLists.txt
26 @@ -6,7 +6,6 @@
27 # ==========================
28
29 add_subdirectory( api )
30 -add_subdirectory( third_party )
31 add_subdirectory( toolkit )
32 add_subdirectory( utils )
33
34 diff --git a/src/api/CMakeLists.txt b/src/api/CMakeLists.txt
35 index 66eb35f..65f4639 100644
36 --- a/src/api/CMakeLists.txt
37 +++ b/src/api/CMakeLists.txt
38 @@ -54,8 +54,8 @@ target_link_libraries( BamTools ${APILibs} )
39 target_link_libraries( BamTools-static ${APILibs} )
40
41 # set library install destinations
42 -install( TARGETS BamTools LIBRARY DESTINATION "lib/bamtools" RUNTIME DESTINATION "bin")
43 -install( TARGETS BamTools-static ARCHIVE DESTINATION "lib/bamtools")
44 +install( TARGETS BamTools LIBRARY DESTINATION "lib${LIB_SUFFIX}" RUNTIME DESTINATION "bin")
45 +install( TARGETS BamTools-static ARCHIVE DESTINATION "lib${LIB_SUFFIX}")
46
47 # export API headers
48 include(../ExportHeader.cmake)
49 diff --git a/src/toolkit/bamtools_filter.cpp b/src/toolkit/bamtools_filter.cpp
50 index 1189981..cf70199 100644
51 --- a/src/toolkit/bamtools_filter.cpp
52 +++ b/src/toolkit/bamtools_filter.cpp
53 @@ -16,7 +16,7 @@
54 #include <utils/bamtools_utilities.h>
55 using namespace BamTools;
56
57 -#include <jsoncpp/json.h>
58 +#include <json/json.h>
59 using namespace Json;
60
61 #include <cstdio>