[gentoo-commits] proj/sci:master commit in: sci-biology/jellyfish/

[Andrew Ammerlaan]

commit:     f4a2efc5cc14bdcde3643e259fc069af29818570
Author:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
AuthorDate: Fri Jan 14 10:06:05 2022 +0000
Commit:     Andrew Ammerlaan <andrewammerlaan <AT> gentoo <DOT> org>
CommitDate: Fri Jan 14 10:06:05 2022 +0000
URL:        https://gitweb.gentoo.org/proj/sci.git/commit/?id=f4a2efc5

sci-biology/jellyfish: fix configure phase, add missing deps

Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> gentoo.org>

 sci-biology/jellyfish/jellyfish-2.3.0.ebuild | 12 ++++--------
 1 file changed, 4 insertions(+), 8 deletions(-)

diff --git a/sci-biology/jellyfish/jellyfish-2.3.0.ebuild b/sci-biology/jellyfish/jellyfish-2.3.0.ebuild
index 7a8176f75..e8e3c8fd0 100644
--- a/sci-biology/jellyfish/jellyfish-2.3.0.ebuild
+++ b/sci-biology/jellyfish/jellyfish-2.3.0.ebuild
@@ -3,8 +3,6 @@
 
 EAPI=7
 
-inherit autotools
-
 DESCRIPTION="k-mer counter within reads for assemblies"
 HOMEPAGE="http://www.genome.umd.edu/jellyfish.html"
 SRC_URI="https://github.com/gmarcais/Jellyfish/releases/download/v${PV}/${P}.tar.gz"
@@ -16,15 +14,13 @@ SLOT="2"
 KEYWORDS="~amd64 ~x86"
 IUSE="cpu_flags_x86_sse"
 
-DEPEND=""
+RDEPEND="
+	sci-biology/samtools:0
+	sci-libs/htslib
+"
 DEPEND="${RDEPEND}"
 BDEPEND="virtual/pkgconfig"
 
-src_prepare(){
-	eautoreconf
-	default
-}
-
 # TODO: enable compilation of Bindings to Ruby, Python and Perl
 # '--enable-ruby-binding', '--enable-python-binding' or '--enable-perl-binding',  '--enable-swig'
 src_configure(){