Gentoo Archives: gentoo-commits

From: Horea Christian <horea.christ@×××××.com>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] proj/sci:master commit in: sci-biology/Atlas-Link/
Date: Sun, 27 Sep 2020 22:43:38
Message-Id: 1601246600.767570471714492950777b01427b0eeafae98709.chymera@gentoo
1 commit: 767570471714492950777b01427b0eeafae98709
2 Author: Horea Christian <chr <AT> chymera <DOT> eu>
3 AuthorDate: Sun Sep 27 22:36:25 2020 +0000
4 Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
5 CommitDate: Sun Sep 27 22:43:20 2020 +0000
6 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=76757047
7
8 sci-biology/Atlas-Link: removed discontinued package
9
10 Package-Manager: Portage-3.0.8, Repoman-3.0.1
11 Signed-off-by: Horea Christian <chr <AT> chymera.eu>
12
13 sci-biology/Atlas-Link/Atlas-Link-0.01-r1.ebuild | 26 ------------------------
14 sci-biology/Atlas-Link/metadata.xml | 12 -----------
15 2 files changed, 38 deletions(-)
16
17 diff --git a/sci-biology/Atlas-Link/Atlas-Link-0.01-r1.ebuild b/sci-biology/Atlas-Link/Atlas-Link-0.01-r1.ebuild
18 deleted file mode 100644
19 index 9324bc4f8..000000000
20 --- a/sci-biology/Atlas-Link/Atlas-Link-0.01-r1.ebuild
21 +++ /dev/null
22 @@ -1,26 +0,0 @@
23 -# Copyright 1999-2016 Gentoo Foundation
24 -# Distributed under the terms of the GNU General Public License v2
25 -
26 -EAPI=6
27 -
28 -inherit perl-module
29 -
30 -DESCRIPTION="Link and orient genome sequence contigs using mate-pair information"
31 -HOMEPAGE="https://www.hgsc.bcm.edu/software/atlas-link"
32 -SRC_URI="https://www.hgsc.bcm.edu/sites/default/files/software/Atlas_Link/Atlas-link.tar.gz -> ${P}.tar.gz"
33 -
34 -LICENSE="HGSC-BCM"
35 -SLOT="0"
36 -KEYWORDS=""
37 -IUSE=""
38 -
39 -# https://github.com/gitpan/Algorithm-ClusterPoints
40 -DEPEND="
41 - dev-lang/perl
42 - dev-perl/Graph
43 - dev-perl/Algorithm-ClusterPoints
44 - dev-perl/XML-DOM
45 - dev-perl/Statistics-Descriptive"
46 -RDEPEND="${DEPEND}"
47 -
48 -S="${WORKDIR}"/Atlas-link
49
50 diff --git a/sci-biology/Atlas-Link/metadata.xml b/sci-biology/Atlas-Link/metadata.xml
51 deleted file mode 100644
52 index 138cb7705..000000000
53 --- a/sci-biology/Atlas-Link/metadata.xml
54 +++ /dev/null
55 @@ -1,12 +0,0 @@
56 -<?xml version="1.0" encoding="UTF-8"?>
57 -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
58 -<pkgmetadata>
59 - <maintainer type="person">
60 - <email>mmokrejs@×××××××××××××××.cz</email>
61 - <name>Martin Mokrejs</name>
62 - </maintainer>
63 - <maintainer type="project">
64 - <email>sci-biology@g.o</email>
65 - <name>Gentoo Biology Project</name>
66 - </maintainer>
67 -</pkgmetadata>