Gentoo Archives: gentoo-commits

From: Justin Lecher <jlec@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] repo/gentoo:master commit in: sci-biology/rebase/
Date: Mon, 02 Jan 2017 22:09:16
Message-Id: 1483394946.7e87f658f887ff9c3af76e3175fa3aa2912adf54.jlec@gentoo
1 commit: 7e87f658f887ff9c3af76e3175fa3aa2912adf54
2 Author: Justin Lecher <jlec <AT> gentoo <DOT> org>
3 AuthorDate: Mon Jan 2 21:52:30 2017 +0000
4 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org>
5 CommitDate: Mon Jan 2 22:09:06 2017 +0000
6 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=7e87f658
7
8 sci-biology/rebase: Drop old
9
10 Package-Manager: Portage-2.3.3, Repoman-2.3.1
11 Signed-off-by: Justin Lecher <jlec <AT> gentoo.org>
12
13 sci-biology/rebase/Manifest | 5 ----
14 sci-biology/rebase/rebase-1602.ebuild | 46 -----------------------------------
15 sci-biology/rebase/rebase-1604.ebuild | 46 -----------------------------------
16 sci-biology/rebase/rebase-1608.ebuild | 46 -----------------------------------
17 sci-biology/rebase/rebase-1609.ebuild | 46 -----------------------------------
18 sci-biology/rebase/rebase-1611.ebuild | 46 -----------------------------------
19 6 files changed, 235 deletions(-)
20
21 diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
22 index c298e33..00e400e 100644
23 --- a/sci-biology/rebase/Manifest
24 +++ b/sci-biology/rebase/Manifest
25 @@ -1,8 +1,3 @@
26 -DIST rebase-1602.tar.xz 101007300 SHA256 26257dc10a6aba54024772956ae03e8530d4b2176db60dcc386427196a936d0b SHA512 7a00a11019124a835ef3d328c33cc4ab9d59665b3c929cf02a44bc09de8ca53185b939057705ee6ce79eeddc9ca9b8246582895b949dd38abe9066a380e3a2c9 WHIRLPOOL fac62146ab6ff09895cc9e4ece2b4869910c90c342051c5446085267585362adcc8a30af66a58d068d86c3eb6e7a37ceb32224a69114aa629a62a958fae09ed0
27 -DIST rebase-1604.tar.xz 102817536 SHA256 f234eadba5aa30573d664c9d9caab480ecbb383f0beab256e149296ee5d982ef SHA512 8ba6a24a8cf1b71a1ac2e0fb1634c0307d570af459fc940639046bd57362f3750e5f0390bcb7f3c7d2b924e1a5bf02825b5feb87a1f7d670d755f3b843df91a3 WHIRLPOOL 8ccaf435d7582fe1b86676037aaf7b0db742cd8d998a55d400f941a94e53731e1814028e1fed1be46f53bea702b570a1bffd73ba328ee06db17adcd731e3733c
28 DIST rebase-1607.tar.xz 111124484 SHA256 2d795db3cc8cf7ff22eda983334e480b9c7b61c5b5ed9d38e2d626489fc4cefe SHA512 b166f75d6d82efe68f9e2521e26c7dc1bf34dde168d6eb94195f2f938316b0c7d06a11684de7d71e9bef2f3051a12c848c87a0d48bb6e148f6f84e9f694ced48 WHIRLPOOL 823054e6b366b707ba1be105fd6172f315358ba07ac8cfb7bbafdac3b9f14718e3406bb4b1c048b18dc8422ead4da09512b61758470bd5ca6a8d9141ebb5c578
29 -DIST rebase-1608.tar.xz 113417576 SHA256 ce8872adbe09c756af4bded43bde43e45d82b14642454fad05da8deef271bb81 SHA512 989d353cb9d73039d6c08805c4d32dbef1bdd37683f4c2ead5fa4889eae05bf3bdba54214d199b87961d8ace4d950f21dbc749e955867f8c6ccac766c7a06520 WHIRLPOOL bc89aa9230680ac08d3c17f7068bb45cb28dbf45038ffda5c2b4660fe366cdc32376ca32439953a2faa7524c6a5c4811a124288b85cf8320ef324458e3957d70
30 -DIST rebase-1609.tar.xz 140865364 SHA256 0799f4a1dae79eaea6629425f6dae104951b94777dc58866adceb4277c577f51 SHA512 3a06a67c7df78f3eb6214dece1f2045ce2610cf34efc8f9eb34b97ca2aa818ea9b52124da1b44895a5a53ec45b19bb78f0cc036b2053e28f1cb72087cd42ad35 WHIRLPOOL fcd5ff5674465cab269dbe8c4f7e5c2c33f6b3b2a515e3f1c1a8c8b60fc68ecca1f48ea4c363ce52b77ddfd50e8fc9c22aad69b7ebc190ccdcfcd2b52d3bc27b
31 -DIST rebase-1611.tar.xz 117976252 SHA256 fcfe506c8f018b8d7b43c5f87e4125310e43d2d2ea5f3ea6b3523f9d23ae7d1c SHA512 33287d497e399a7cfb8e7dc6e2b905553303b4b8dce49066eafc3f48cac47e9e3fd8c8736a7a0352ed5fd5da39aca220ed59884f887a5588cedc2d5e56b6e764 WHIRLPOOL 52758d6017e0725bd2f84cb2cd4f16b3965a21f45a664ed71078d50b95a64664239936a605052bc3b34ef67e70cb96fd5b1e2005bdc699be9cff9f919b197734
32 DIST rebase-1612.tar.xz 122519992 SHA256 eb94346564c43244c5959b5948fe59f0ebe9e2590978f1ec8787a3395e918368 SHA512 3936749465f828d1b5922b4c75635a678e2e865cef88084d819291227bd1404e56edbc208e986a7373c32ff0172709cfcb8c4343f8512fbdacf39666f97c5026 WHIRLPOOL 729aa68437b48e3bcbaaf3747feaaf7090a612d2a05658a28ca74b8c58b3227718b0ca9d17a9d5caba42ba02cb6d11fe8bc34796bf385a8310bed2aecae20985
33 DIST rebase-1701.tar.xz 120604368 SHA256 cc8cf90f874dcb179b9f7654780ff783066fa6a67fffb90d6ac08d2917fa671b SHA512 1833db9d78508bbd5317f9b42b0e8129096f1695d5a14d5e2b6043bc94091a76ac404c576ad622be4e32c46aff7975a7ec3e36c3da71ce3ce1665868ee0d77cb WHIRLPOOL 641b755b92e8aa9ca2d9a69760d0414a95f38512fa235a9856a953398d5ab0c853bb4743f6790aada1d90f968bfaa76c0651aadea842fff9700941c506a29ecd
34
35 diff --git a/sci-biology/rebase/rebase-1602.ebuild b/sci-biology/rebase/rebase-1602.ebuild
36 deleted file mode 100644
37 index 875464d..00000000
38 --- a/sci-biology/rebase/rebase-1602.ebuild
39 +++ /dev/null
40 @@ -1,46 +0,0 @@
41 -# Copyright 1999-2016 Gentoo Foundation
42 -# Distributed under the terms of the GNU General Public License v2
43 -# $Id$
44 -
45 -EAPI=5
46 -
47 -MY_PV=${PV#1}
48 -
49 -DESCRIPTION="A restriction enzyme database"
50 -HOMEPAGE="http://rebase.neb.com"
51 -SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
52 -
53 -SLOT="0"
54 -LICENSE="public-domain"
55 -KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
56 -IUSE="emboss minimal"
57 -
58 -RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
59 -DEPEND="${RDEPEND}"
60 -
61 -RESTRICT="binchecks strip"
62 -
63 -src_compile() {
64 - if use emboss; then
65 - echo; einfo "Indexing Rebase for usage with EMBOSS."
66 - mkdir REBASE || die
67 - EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
68 - -protofile proto.${MY_PV} -equivalences \
69 - || die "Indexing Rebase failed."
70 - echo
71 - fi
72 -}
73 -
74 -src_install() {
75 - if ! use minimal; then
76 - insinto /usr/share/${PN}
77 - doins withrefm.${MY_PV} proto.${MY_PV}
78 - fi
79 - newdoc REBASE.DOC README
80 - if use emboss; then
81 - insinto /usr/share/EMBOSS/data/REBASE
82 - doins REBASE/embossre.{enz,ref,sup}
83 - insinto /usr/share/EMBOSS/data
84 - doins REBASE/embossre.equ
85 - fi
86 -}
87
88 diff --git a/sci-biology/rebase/rebase-1604.ebuild b/sci-biology/rebase/rebase-1604.ebuild
89 deleted file mode 100644
90 index 436b460..00000000
91 --- a/sci-biology/rebase/rebase-1604.ebuild
92 +++ /dev/null
93 @@ -1,46 +0,0 @@
94 -# Copyright 1999-2016 Gentoo Foundation
95 -# Distributed under the terms of the GNU General Public License v2
96 -# $Id$
97 -
98 -EAPI=5
99 -
100 -MY_PV=${PV#1}
101 -
102 -DESCRIPTION="A restriction enzyme database"
103 -HOMEPAGE="http://rebase.neb.com"
104 -SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
105 -
106 -SLOT="0"
107 -LICENSE="public-domain"
108 -KEYWORDS="amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
109 -IUSE="emboss minimal"
110 -
111 -RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
112 -DEPEND="${RDEPEND}"
113 -
114 -RESTRICT="binchecks strip"
115 -
116 -src_compile() {
117 - if use emboss; then
118 - echo; einfo "Indexing Rebase for usage with EMBOSS."
119 - mkdir REBASE || die
120 - EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
121 - -protofile proto.${MY_PV} -equivalences \
122 - || die "Indexing Rebase failed."
123 - echo
124 - fi
125 -}
126 -
127 -src_install() {
128 - if ! use minimal; then
129 - insinto /usr/share/${PN}
130 - doins withrefm.${MY_PV} proto.${MY_PV}
131 - fi
132 - newdoc REBASE.DOC README
133 - if use emboss; then
134 - insinto /usr/share/EMBOSS/data/REBASE
135 - doins REBASE/embossre.{enz,ref,sup}
136 - insinto /usr/share/EMBOSS/data
137 - doins REBASE/embossre.equ
138 - fi
139 -}
140
141 diff --git a/sci-biology/rebase/rebase-1608.ebuild b/sci-biology/rebase/rebase-1608.ebuild
142 deleted file mode 100644
143 index 9adb365..00000000
144 --- a/sci-biology/rebase/rebase-1608.ebuild
145 +++ /dev/null
146 @@ -1,46 +0,0 @@
147 -# Copyright 1999-2016 Gentoo Foundation
148 -# Distributed under the terms of the GNU General Public License v2
149 -# $Id$
150 -
151 -EAPI=5
152 -
153 -MY_PV=${PV#1}
154 -
155 -DESCRIPTION="A restriction enzyme database"
156 -HOMEPAGE="http://rebase.neb.com"
157 -SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
158 -
159 -SLOT="0"
160 -LICENSE="public-domain"
161 -KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
162 -IUSE="emboss minimal"
163 -
164 -RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
165 -DEPEND="${RDEPEND}"
166 -
167 -RESTRICT="binchecks strip"
168 -
169 -src_compile() {
170 - if use emboss; then
171 - echo; einfo "Indexing Rebase for usage with EMBOSS."
172 - mkdir REBASE || die
173 - EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
174 - -protofile proto.${MY_PV} -equivalences \
175 - || die "Indexing Rebase failed."
176 - echo
177 - fi
178 -}
179 -
180 -src_install() {
181 - if ! use minimal; then
182 - insinto /usr/share/${PN}
183 - doins withrefm.${MY_PV} proto.${MY_PV}
184 - fi
185 - newdoc REBASE.DOC README
186 - if use emboss; then
187 - insinto /usr/share/EMBOSS/data/REBASE
188 - doins REBASE/embossre.{enz,ref,sup}
189 - insinto /usr/share/EMBOSS/data
190 - doins REBASE/embossre.equ
191 - fi
192 -}
193
194 diff --git a/sci-biology/rebase/rebase-1609.ebuild b/sci-biology/rebase/rebase-1609.ebuild
195 deleted file mode 100644
196 index 47f2e43..00000000
197 --- a/sci-biology/rebase/rebase-1609.ebuild
198 +++ /dev/null
199 @@ -1,46 +0,0 @@
200 -# Copyright 1999-2016 Gentoo Foundation
201 -# Distributed under the terms of the GNU General Public License v2
202 -# $Id$
203 -
204 -EAPI=6
205 -
206 -MY_PV=${PV#1}
207 -
208 -DESCRIPTION="A restriction enzyme database"
209 -HOMEPAGE="http://rebase.neb.com"
210 -SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
211 -
212 -SLOT="0"
213 -LICENSE="public-domain"
214 -KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
215 -IUSE="emboss minimal"
216 -
217 -RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
218 -DEPEND="${RDEPEND}"
219 -
220 -RESTRICT="binchecks strip"
221 -
222 -src_compile() {
223 - if use emboss; then
224 - echo; einfo "Indexing Rebase for usage with EMBOSS."
225 - mkdir REBASE || die
226 - EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
227 - -protofile proto.${MY_PV} -equivalences \
228 - || die "Indexing Rebase failed."
229 - echo
230 - fi
231 -}
232 -
233 -src_install() {
234 - if ! use minimal; then
235 - insinto /usr/share/${PN}
236 - doins withrefm.${MY_PV} proto.${MY_PV}
237 - fi
238 - newdoc REBASE.DOC README
239 - if use emboss; then
240 - insinto /usr/share/EMBOSS/data/REBASE
241 - doins REBASE/embossre.{enz,ref,sup}
242 - insinto /usr/share/EMBOSS/data
243 - doins REBASE/embossre.equ
244 - fi
245 -}
246
247 diff --git a/sci-biology/rebase/rebase-1611.ebuild b/sci-biology/rebase/rebase-1611.ebuild
248 deleted file mode 100644
249 index 47f2e43..00000000
250 --- a/sci-biology/rebase/rebase-1611.ebuild
251 +++ /dev/null
252 @@ -1,46 +0,0 @@
253 -# Copyright 1999-2016 Gentoo Foundation
254 -# Distributed under the terms of the GNU General Public License v2
255 -# $Id$
256 -
257 -EAPI=6
258 -
259 -MY_PV=${PV#1}
260 -
261 -DESCRIPTION="A restriction enzyme database"
262 -HOMEPAGE="http://rebase.neb.com"
263 -SRC_URI="https://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
264 -
265 -SLOT="0"
266 -LICENSE="public-domain"
267 -KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
268 -IUSE="emboss minimal"
269 -
270 -RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
271 -DEPEND="${RDEPEND}"
272 -
273 -RESTRICT="binchecks strip"
274 -
275 -src_compile() {
276 - if use emboss; then
277 - echo; einfo "Indexing Rebase for usage with EMBOSS."
278 - mkdir REBASE || die
279 - EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
280 - -protofile proto.${MY_PV} -equivalences \
281 - || die "Indexing Rebase failed."
282 - echo
283 - fi
284 -}
285 -
286 -src_install() {
287 - if ! use minimal; then
288 - insinto /usr/share/${PN}
289 - doins withrefm.${MY_PV} proto.${MY_PV}
290 - fi
291 - newdoc REBASE.DOC README
292 - if use emboss; then
293 - insinto /usr/share/EMBOSS/data/REBASE
294 - doins REBASE/embossre.{enz,ref,sup}
295 - insinto /usr/share/EMBOSS/data
296 - doins REBASE/embossre.equ
297 - fi
298 -}