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| From: | "Andrey Kislyuk (weaver)" <weaver@g.o> |
|---|---|
| To: | gentoo-commits@l.g.o |
| Subject: | [gentoo-commits] gentoo-x86 commit in sci-biology/bwa: ChangeLog bwa-0.4.6.ebuild bwa-0.4.5.ebuild |
| Date: | Mon, 20 Apr 2009 17:40:47 |
| Message-Id: | E1LvxU4-0000Le-PW@stork.gentoo.org |
| 1 | weaver 09/04/20 17:40:44 |
| 2 | |
| 3 | Modified: ChangeLog |
| 4 | Added: bwa-0.4.6.ebuild |
| 5 | Removed: bwa-0.4.5.ebuild |
| 6 | Log: |
| 7 | Version bump |
| 8 | (Portage version: 2.2_rc30/cvs/Linux x86_64) |
| 9 | |
| 10 | Revision Changes Path |
| 11 | 1.2 sci-biology/bwa/ChangeLog |
| 12 | |
| 13 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bwa/ChangeLog?rev=1.2&view=markup |
| 14 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bwa/ChangeLog?rev=1.2&content-type=text/plain |
| 15 | diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bwa/ChangeLog?r1=1.1&r2=1.2 |
| 16 | |
| 17 | Index: ChangeLog |
| 18 | =================================================================== |
| 19 | RCS file: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v |
| 20 | retrieving revision 1.1 |
| 21 | retrieving revision 1.2 |
| 22 | diff -u -r1.1 -r1.2 |
| 23 | --- ChangeLog 26 Feb 2009 22:11:27 -0000 1.1 |
| 24 | +++ ChangeLog 20 Apr 2009 17:40:44 -0000 1.2 |
| 25 | @@ -1,6 +1,12 @@ |
| 26 | # ChangeLog for sci-biology/bwa |
| 27 | # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 |
| 28 | -# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v 1.1 2009/02/26 22:11:27 weaver Exp $ |
| 29 | +# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v 1.2 2009/04/20 17:40:44 weaver Exp $ |
| 30 | + |
| 31 | +*bwa-0.4.6 (20 Apr 2009) |
| 32 | + |
| 33 | + 20 Apr 2009; Andrey Kislyuk <weaver@g.o> -bwa-0.4.5.ebuild, |
| 34 | + +bwa-0.4.6.ebuild: |
| 35 | + Version bump |
| 36 | |
| 37 | *bwa-0.4.5 (26 Feb 2009) |
| 38 | |
| 39 | |
| 40 | |
| 41 | |
| 42 | 1.1 sci-biology/bwa/bwa-0.4.6.ebuild |
| 43 | |
| 44 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bwa/bwa-0.4.6.ebuild?rev=1.1&view=markup |
| 45 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/bwa/bwa-0.4.6.ebuild?rev=1.1&content-type=text/plain |
| 46 | |
| 47 | Index: bwa-0.4.6.ebuild |
| 48 | =================================================================== |
| 49 | # Copyright 1999-2009 Gentoo Foundation |
| 50 | # Distributed under the terms of the GNU General Public License v2 |
| 51 | # $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/bwa-0.4.6.ebuild,v 1.1 2009/04/20 17:40:44 weaver Exp $ |
| 52 | |
| 53 | EAPI=2 |
| 54 | |
| 55 | DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner" |
| 56 | HOMEPAGE="http://maq.sourceforge.net/" |
| 57 | SRC_URI="mirror://sourceforge/maq/${P}.tar.bz2" |
| 58 | |
| 59 | LICENSE="GPL-3" |
| 60 | SLOT="0" |
| 61 | IUSE="" |
| 62 | KEYWORDS="~amd64 ~x86" |
| 63 | |
| 64 | DEPEND="" |
| 65 | RDEPEND="" |
| 66 | |
| 67 | src_prepare() { |
| 68 | sed -i 's/^CFLAGS=/CFLAGS+=/' "${S}/Makefile" |
| 69 | } |
| 70 | |
| 71 | src_install() { |
| 72 | dobin bwa || die |
| 73 | doman bwa.1 || die |
| 74 | exeinto /usr/share/${PN} |
| 75 | doexe solid2fastq.pl || die |
| 76 | dodoc ChangeLog NEWS |
| 77 | } |