| 1 |
commit: 89aa96291f6c4158352071cb705a38d46edda16a |
| 2 |
Author: Christoph Junghans <junghans <AT> gentoo <DOT> org> |
| 3 |
AuthorDate: Mon Jan 2 14:41:20 2017 +0000 |
| 4 |
Commit: Christoph Junghans <junghans <AT> gentoo <DOT> org> |
| 5 |
CommitDate: Mon Jan 2 14:42:33 2017 +0000 |
| 6 |
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=89aa9629 |
| 7 |
|
| 8 |
sci-chemistry/votca-csg: remove old |
| 9 |
|
| 10 |
Package-Manager: portage-2.3.0 |
| 11 |
|
| 12 |
sci-chemistry/votca-csg/Manifest | 9 -- |
| 13 |
.../votca-csg/files/votca-csg-1.3-cmake-3.4.patch | 62 ----------- |
| 14 |
sci-chemistry/votca-csg/votca-csg-1.2.4-r1.ebuild | 90 ---------------- |
| 15 |
sci-chemistry/votca-csg/votca-csg-1.3-r1.ebuild | 115 --------------------- |
| 16 |
sci-chemistry/votca-csg/votca-csg-1.3.1.ebuild | 114 -------------------- |
| 17 |
5 files changed, 390 deletions(-) |
| 18 |
|
| 19 |
diff --git a/sci-chemistry/votca-csg/Manifest b/sci-chemistry/votca-csg/Manifest |
| 20 |
index 545beac..7ead25d 100644 |
| 21 |
--- a/sci-chemistry/votca-csg/Manifest |
| 22 |
+++ b/sci-chemistry/votca-csg/Manifest |
| 23 |
@@ -1,12 +1,3 @@ |
| 24 |
-DIST votca-csg-1.2.4.tar.gz 188345 SHA256 375b428c90247a3877f71c2d96200969bcaf2b081b8c7332ac770720df43646a SHA512 da814154be6700b56509d899ea16a2f974fd951792c78f2f8717b39b0165fe19121fefb2ef9531c63a8d4558d15776058d24b13e0e7ad0abb9d7b11fac0f5d1a WHIRLPOOL 64a86b09ae00435c68bf09e960c1d1738648811fe2a9ffb18f5529d30d6f94ebf1fc218b14e1ee0bfc911e5ca1e92c25404be045cf28e16ced98fd7ee4421418 |
| 25 |
-DIST votca-csg-1.3.1.tar.gz 242384 SHA256 608225256cf97552cf860cb3754f59a49c55d8433cff07440b8a252645e7bcb6 SHA512 fed4e164b9661d48fd8fa3f57c0a567b88ef2fe0a7a02cafba1d0b1d557529e5259161f558cae95117df8cae996c30486877c0e5aff96d1e8100341bfb674c20 WHIRLPOOL 553fa0b7fb2e142b984a5be6eff1a4e6e89ea2e78a3e7081441d88a498d2aa2bb5cd5e90456656713a646a7f82875fa79d7b9fa62c66ce9edc084f995f936c61 |
| 26 |
-DIST votca-csg-1.3.tar.gz 242169 SHA256 eace2b90bcd9318ef257355daf09cbd15b10906c44af95d36454aa969a032cff SHA512 c1314672227feb361991b20cb1511473f23df1f0ff337ddc11319f2261ea19ac5c895de72d1da705026520483eebf1477462ea63275451c9fd1e6bbf4826bd76 WHIRLPOOL 2b48e19705fccc8b6af336536d90fdaf168bda05f327a688e604bd079a69b8b9b816d2d549e510659367e397229fbb433c7c406d462f809e0b4ae98c22a8b81b |
| 27 |
DIST votca-csg-1.4.tar.gz 346527 SHA256 713702613b1e51459a18eb1ef83116eb3dbfd25f05d32e5772ee300a674cdc74 SHA512 26318644c7af2dfa1b81242b27ffac98f2180c3a1f05581bc50a00f644cec4b19ffbaf41c9d941a4714171b56ae93fe41f1a663cd0593ae2b0be2da379119d9b WHIRLPOOL 15c7749b1fa003e92e94f4f3f4ac7698667e5a06f739d4e97686aa904b8433a1e1628fae1c1f718bc4bfd2108d515cb12098852a0ebecb213e478874997f3148 |
| 28 |
-DIST votca-csg-manual-1.2.4.pdf 1029132 SHA256 78a68955c96700d432249f712e0601376d5d61fef607860fe32d0ce0dcb70cff SHA512 66b7cf869b2b06d4133b341934fd013717b17c90426f4cdf637ef3bb6119e9f6b67cbde56b7f6b6c777dba9fb311df42dd34d8fe23331f1656439acb541d81bf WHIRLPOOL 629e0e6a8900bb7e4a96b7e1020f86ccacd5a7e7258a493d565c94986a0907371a37d45bf499517a74ad29cf2b606965746e0d90b6be91777f2b0a85f2781732 |
| 29 |
-DIST votca-csg-manual-1.3.1.pdf 1266375 SHA256 320060a77739d3c9ca98116edde94468e136b4bbd38970b82c874eed30af4ee8 SHA512 3335309b364cebcba25269c39dc2383e663a6b46111b02120c63d408a6fd9c3361408beb528d664ce6e13311e5ebff4a4c2772cf2f0e668904b1d9e43030d321 WHIRLPOOL 04adb86ffb10e9e0ecd754ab29940468ec32ddd1f6de1796dd2e89a49e0b60df6a4ecbccab60a085e2619fab480bc63dbb4378490ccfc024c8335ceade983955 |
| 30 |
-DIST votca-csg-manual-1.3.pdf 1266541 SHA256 1520f2c18972a2ec5e0a7e847ae294cee1e6fa5682010a314f2e45c264e59cec SHA512 eb5d88f6cba30d9fd8c3cb11cd6c08dd3e717fccdcbef11c3363d4eb36d23000d8bd7b448c0a5311bcaee2b502e50d7aadb0faf7c9a5e5e9c6e1e37b1e09ec7e WHIRLPOOL f411bdc929515594200a636e6f5e3338797ae35dfe8ba3ddb01913cea85973dccca6482a4aa276ce68689a8f7c4c6d47ae448f2e3ce549d3dba35a1d40eeb44d |
| 31 |
DIST votca-csg-manual-1.4.pdf 1281983 SHA256 e2e235473a64dc674a373eacaade4922e02a64274c1f28bcf3b443fbf425d1da SHA512 2e1f4a4375d83df9bd357d4d17e79d26a3a31c9177f008de86721427ffc6f43a5000ec840691108b52a8aecf962321ba6363cd975c7445d7230ee5b0b151b3fa WHIRLPOOL 24580fe71202daad3d4f627657c6aa24175df807462e5c03a05de39f5b2ba38a44a51ee7cfc50416795fc4dfbc8041a4360a3dd680ea339464e1097782b71ac9 |
| 32 |
-DIST votca-csg-tutorials-1.2.4.tar.gz 3721034 SHA256 94b10f23f6e49c1279cdeea87dfee9c19b44373c74212340acebc06eb11e0245 SHA512 8d78a6ff02aedf97c2b640714fd7acfb7c4b0d03ec0141fa89f0ba041e1d2ec07477653d92effd4c96a6497271ad58f5c3397e1fc183c1c856285f6f8b5ceaf5 WHIRLPOOL ea0df816d2f26f12271250137b51f42ecc4a16eea622d37833d4dcc299732c413ee9f71a67767957b13ce8b44a96e9b1389bbbbdb66015c4b5c6d577d4483cf1 |
| 33 |
-DIST votca-csg-tutorials-1.3.1.tar.gz 7602667 SHA256 7f283d14bec05cf617f1fb8026ee07af2bb1c517ea5a8526e2f318024cbf7069 SHA512 2475d8c8b40df1307c499387d352bdf2e4beb730978a025be66f8b342eb205020739aad88248e1928a66e0e117a3f7bafa553f2db8089b10a6fca22e0bfbdf54 WHIRLPOOL ab5226903f47c7372580a88df762d13dfbd8bea4299371e75c8b0bfbbd220cb07b2c0bafbc0ccf277b9e937f1448cdf1e91b2e44a7699db1b90469dc9a10086e |
| 34 |
-DIST votca-csg-tutorials-1.3.tar.gz 7602622 SHA256 ff6ea92b38b41850f2f92ef7533c1365ec6e6cff15d847eace953d7380777654 SHA512 34788d89fe6e989c91bbbb92887942d774b826d30a6423d539c32065ee8cd6a1adad9a2c4f34fa280c26c2342bf007a35019e6bdd0321dfd7a8f13458c7801a3 WHIRLPOOL e28f33294a5e2a432ef62812243f5bc36cb10a261b09b7bb08267a3da14cd601d7c1835264e1390eebc899f54aad8f12c2880a1a2bb5555681c2f89995672275 |
| 35 |
DIST votca-csg-tutorials-1.4.tar.gz 6348417 SHA256 f5082f57575f09e9a0035f428603946676b251b7cb45b4332ded833be4dca649 SHA512 f3eb28a133ebc04eed07f84d5962943cb9c547c1099638127f15e0015dfdf3f0b25aab4c97d009d6040bf1d69d408cc178edd6e803d33bf1d831e12dca0671c7 WHIRLPOOL da02cda090eb46dd74d6f2bec8adec70ca7a05796ed0d05772133f566e091f794e2d7fa2640ca775e249248624d0f022212444fa3425c3f715a4dea94a300225 |
| 36 |
|
| 37 |
diff --git a/sci-chemistry/votca-csg/files/votca-csg-1.3-cmake-3.4.patch b/sci-chemistry/votca-csg/files/votca-csg-1.3-cmake-3.4.patch |
| 38 |
deleted file mode 100644 |
| 39 |
index 59d83ca..00000000 |
| 40 |
--- a/sci-chemistry/votca-csg/files/votca-csg-1.3-cmake-3.4.patch |
| 41 |
+++ /dev/null |
| 42 |
@@ -1,62 +0,0 @@ |
| 43 |
-From 34d55f6d771bcf026f453457f45d787391910598 Mon Sep 17 00:00:00 2001 |
| 44 |
-From: Christoph Junghans <junghans@×××××.org> |
| 45 |
-Date: Tue, 2 Feb 2016 13:56:50 -0700 |
| 46 |
-Subject: [PATCH] cmake: fixed CheckCXXLibraryExists() with >=cmake-3.4 |
| 47 |
- |
| 48 |
---- |
| 49 |
- CMakeModules/CheckCXXLibraryExists.cmake | 6 +----- |
| 50 |
- CMakeModules/CheckFunctionExists.cpp | 23 +++++++++++++++++++++++ |
| 51 |
- 2 files changed, 24 insertions(+), 5 deletions(-) |
| 52 |
- create mode 100644 CMakeModules/CheckFunctionExists.cpp |
| 53 |
- |
| 54 |
-diff --git a/CMakeModules/CheckCXXLibraryExists.cmake b/CMakeModules/CheckCXXLibraryExists.cmake |
| 55 |
-index 9c76fe2..d84aea7 100644 |
| 56 |
---- a/CMakeModules/CheckCXXLibraryExists.cmake |
| 57 |
-+++ b/CMakeModules/CheckCXXLibraryExists.cmake |
| 58 |
-@@ -54,13 +54,9 @@ macro(CHECK_CXX_LIBRARY_EXISTS LIBRARY FUNCTION LOCATION VARIABLE) |
| 59 |
- set(CHECK_LIBRARY_EXISTS_LIBRARIES |
| 60 |
- ${CHECK_LIBRARY_EXISTS_LIBRARIES} ${CMAKE_REQUIRED_LIBRARIES}) |
| 61 |
- endif() |
| 62 |
-- if(NOT EXISTS ${CMAKE_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/CheckFunctionExists.cpp) |
| 63 |
-- file(COPY ${CMAKE_ROOT}/Modules/CheckFunctionExists.c DESTINATION ${CMAKE_BINARY_DIR}${CMAKE_FILES_DIRECTORY}) |
| 64 |
-- file(RENAME ${CMAKE_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/CheckFunctionExists.c ${CMAKE_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/CheckFunctionExists.cpp) |
| 65 |
-- endif() |
| 66 |
- try_compile(${VARIABLE} |
| 67 |
- ${CMAKE_BINARY_DIR} |
| 68 |
-- ${CMAKE_BINARY_DIR}${CMAKE_FILES_DIRECTORY}/CheckFunctionExists.cpp |
| 69 |
-+ ${CMAKE_CURRENT_SOURCE_DIR}/CMakeModules/CheckFunctionExists.cpp |
| 70 |
- COMPILE_DEFINITIONS ${CMAKE_REQUIRED_DEFINITIONS} |
| 71 |
- LINK_LIBRARIES ${CHECK_LIBRARY_EXISTS_LIBRARIES} |
| 72 |
- CMAKE_FLAGS |
| 73 |
-diff --git a/CMakeModules/CheckFunctionExists.cpp b/CMakeModules/CheckFunctionExists.cpp |
| 74 |
-new file mode 100644 |
| 75 |
-index 0000000..607b3e8 |
| 76 |
---- /dev/null |
| 77 |
-+++ b/CMakeModules/CheckFunctionExists.cpp |
| 78 |
-@@ -0,0 +1,23 @@ |
| 79 |
-+#ifdef CHECK_FUNCTION_EXISTS |
| 80 |
-+ |
| 81 |
-+char CHECK_FUNCTION_EXISTS(); |
| 82 |
-+#ifdef __CLASSIC_C__ |
| 83 |
-+int main(){ |
| 84 |
-+ int ac; |
| 85 |
-+ char*av[]; |
| 86 |
-+#else |
| 87 |
-+int main(int ac, char*av[]){ |
| 88 |
-+#endif |
| 89 |
-+ CHECK_FUNCTION_EXISTS(); |
| 90 |
-+ if(ac > 1000) |
| 91 |
-+ { |
| 92 |
-+ return *av[0]; |
| 93 |
-+ } |
| 94 |
-+ return 0; |
| 95 |
-+} |
| 96 |
-+ |
| 97 |
-+#else /* CHECK_FUNCTION_EXISTS */ |
| 98 |
-+ |
| 99 |
-+# error "CHECK_FUNCTION_EXISTS has to specify the function" |
| 100 |
-+ |
| 101 |
-+#endif /* CHECK_FUNCTION_EXISTS */ |
| 102 |
--- |
| 103 |
-2.7.3 |
| 104 |
- |
| 105 |
|
| 106 |
diff --git a/sci-chemistry/votca-csg/votca-csg-1.2.4-r1.ebuild b/sci-chemistry/votca-csg/votca-csg-1.2.4-r1.ebuild |
| 107 |
deleted file mode 100644 |
| 108 |
index 295af05..00000000 |
| 109 |
--- a/sci-chemistry/votca-csg/votca-csg-1.2.4-r1.ebuild |
| 110 |
+++ /dev/null |
| 111 |
@@ -1,90 +0,0 @@ |
| 112 |
-# Copyright 1999-2016 Gentoo Foundation |
| 113 |
-# Distributed under the terms of the GNU General Public License v2 |
| 114 |
-# $Id$ |
| 115 |
- |
| 116 |
-EAPI=5 |
| 117 |
- |
| 118 |
-inherit bash-completion-r1 cmake-utils multilib |
| 119 |
- |
| 120 |
-IUSE="doc examples extras +gromacs" |
| 121 |
-PDEPEND="extras? ( =sci-chemistry/votca-csgapps-${PV} )" |
| 122 |
-if [ "${PV}" != "9999" ]; then |
| 123 |
- SRC_URI="https://github.com/votca/downloads/raw/master/${P}.tar.gz |
| 124 |
- doc? ( https://github.com/votca/downloads/raw/master/${PN}-manual-${PV}.pdf ) |
| 125 |
- examples? ( https://github.com/votca/downloads/raw/master/${PN}-tutorials-${PV}.tar.gz )" |
| 126 |
-fi |
| 127 |
- |
| 128 |
-DESCRIPTION="Votca coarse-graining engine" |
| 129 |
-HOMEPAGE="http://www.votca.org" |
| 130 |
- |
| 131 |
-LICENSE="Apache-2.0" |
| 132 |
-SLOT="0" |
| 133 |
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-macos" |
| 134 |
- |
| 135 |
-#perl is only used for scripts |
| 136 |
-RDEPEND="~sci-libs/votca-tools-${PV} |
| 137 |
- gromacs? ( <sci-chemistry/gromacs-5.1:= ) |
| 138 |
- dev-lang/perl |
| 139 |
- app-shells/bash:0" |
| 140 |
- |
| 141 |
-DEPEND="${RDEPEND} |
| 142 |
- doc? ( >=app-doc/doxygen-1.7.6.1[dot] ) |
| 143 |
- >=app-text/txt2tags-2.5 |
| 144 |
- virtual/pkgconfig" |
| 145 |
- |
| 146 |
-DOCS=(README NOTICE ChangeLog) |
| 147 |
- |
| 148 |
-src_configure() { |
| 149 |
- local GMX_DEV="OFF" GMX_DOUBLE="OFF" extra |
| 150 |
- |
| 151 |
- if use gromacs; then |
| 152 |
- has_version ">=sci-chemistry/gromacs-5" && GMX_DEV="ON" |
| 153 |
- has_version sci-chemistry/gromacs[double-precision] && GMX_DOUBLE="ON" |
| 154 |
- fi |
| 155 |
- |
| 156 |
- #to create man pages, build tree binaries are executed (bug #398437) |
| 157 |
- [[ ${CHOST} = *-darwin* ]] && \ |
| 158 |
- extra+=" -DCMAKE_BUILD_WITH_INSTALL_RPATH=OFF" |
| 159 |
- |
| 160 |
- mycmakeargs=( |
| 161 |
- $(cmake-utils_use_with gromacs GMX) |
| 162 |
- -DWITH_GMX_DEVEL="${GMX_DEV}" |
| 163 |
- -DGMX_DOUBLE="${GMX_DOUBLE}" |
| 164 |
- ${extra} |
| 165 |
- -DWITH_RC_FILES=OFF |
| 166 |
- -DEXTERNAL_BOOST=ON |
| 167 |
- -DLIB=$(get_libdir) |
| 168 |
- ) |
| 169 |
- cmake-utils_src_configure |
| 170 |
-} |
| 171 |
- |
| 172 |
-src_install() { |
| 173 |
- cmake-utils_src_install |
| 174 |
- newbashcomp scripts/csg-completion.bash csg_call |
| 175 |
- for i in "${ED}"/usr/bin/csg_*; do |
| 176 |
- [[ ${i} = *csg_call ]] && continue |
| 177 |
- bashcomp_alias csg_call "${i##*/}" |
| 178 |
- done |
| 179 |
- if use doc; then |
| 180 |
- if [ -n "${PV##*9999}" ]; then |
| 181 |
- dodoc "${DISTDIR}/${PN}-manual-${PV}.pdf" |
| 182 |
- fi |
| 183 |
- cd "${CMAKE_BUILD_DIR}" || die |
| 184 |
- cd share/doc || die |
| 185 |
- doxygen || die |
| 186 |
- dohtml -r html/* |
| 187 |
- fi |
| 188 |
- if use examples && [ -n "${PV##*9999}" ]; then |
| 189 |
- insinto "/usr/share/doc/${PF}/tutorials" |
| 190 |
- docompress -x "/usr/share/doc/${PF}/tutorials" |
| 191 |
- doins -r "${WORKDIR}/${PN}-tutorials-${PV}"/* |
| 192 |
- fi |
| 193 |
-} |
| 194 |
- |
| 195 |
-pkg_postinst() { |
| 196 |
- einfo |
| 197 |
- einfo "Please read and cite:" |
| 198 |
- einfo "VOTCA, J. Chem. Theory Comput. 5, 3211 (2009). " |
| 199 |
- einfo "http://dx.doi.org/10.1021/ct900369w" |
| 200 |
- einfo |
| 201 |
-} |
| 202 |
|
| 203 |
diff --git a/sci-chemistry/votca-csg/votca-csg-1.3-r1.ebuild b/sci-chemistry/votca-csg/votca-csg-1.3-r1.ebuild |
| 204 |
deleted file mode 100644 |
| 205 |
index 5f6435b..00000000 |
| 206 |
--- a/sci-chemistry/votca-csg/votca-csg-1.3-r1.ebuild |
| 207 |
+++ /dev/null |
| 208 |
@@ -1,115 +0,0 @@ |
| 209 |
-# Copyright 1999-2016 Gentoo Foundation |
| 210 |
-# Distributed under the terms of the GNU General Public License v2 |
| 211 |
-# $Id$ |
| 212 |
- |
| 213 |
-EAPI=6 |
| 214 |
- |
| 215 |
-CMAKE_MAKEFILE_GENERATOR="ninja" |
| 216 |
- |
| 217 |
-inherit bash-completion-r1 cmake-utils multilib |
| 218 |
- |
| 219 |
-IUSE="doc examples extras +gromacs hdf5" |
| 220 |
-PDEPEND="extras? ( =sci-chemistry/${PN}apps-${PV} )" |
| 221 |
-if [ "${PV}" != "9999" ]; then |
| 222 |
- SRC_URI="https://github.com/${PN/-//}/archive/v${PV}.tar.gz -> ${P}.tar.gz |
| 223 |
- doc? ( https://github.com/${PN/-//}-manual/releases/download/v${PV}/${PN}-manual-${PV}.pdf ) |
| 224 |
- examples? ( https://github.com/${PN/-//}-tutorials/archive/v${PV}.tar.gz -> ${PN}-tutorials-${PV}.tar.gz )" |
| 225 |
- KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-macos" |
| 226 |
- S="${WORKDIR}/${P#votca-}" |
| 227 |
- PATCHES=( "${FILESDIR}/${P}-cmake-3.4.patch" ) |
| 228 |
-else |
| 229 |
- inherit git-r3 |
| 230 |
- EGIT_REPO_URI="git://github.com/${PN/-//}.git https://github.com/${PN/-//}.git" |
| 231 |
- KEYWORDS="" |
| 232 |
-fi |
| 233 |
- |
| 234 |
-DESCRIPTION="Votca coarse-graining engine" |
| 235 |
-HOMEPAGE="http://www.votca.org" |
| 236 |
- |
| 237 |
-LICENSE="Apache-2.0" |
| 238 |
-SLOT="0" |
| 239 |
- |
| 240 |
-RDEPEND=" |
| 241 |
- =sci-libs/votca-tools-${PV} |
| 242 |
- gromacs? ( sci-chemistry/gromacs:= ) |
| 243 |
- hdf5? ( sci-libs/hdf5[cxx] ) |
| 244 |
- dev-lang/perl |
| 245 |
- app-shells/bash:*" |
| 246 |
- |
| 247 |
-DEPEND="${RDEPEND} |
| 248 |
- doc? ( |
| 249 |
- app-doc/doxygen[dot] |
| 250 |
- dev-texlive/texlive-latexextra |
| 251 |
- virtual/latex-base |
| 252 |
- dev-tex/pgf |
| 253 |
- ) |
| 254 |
- >=app-text/txt2tags-2.5 |
| 255 |
- virtual/pkgconfig" |
| 256 |
- |
| 257 |
-DOCS=( README.md NOTICE CHANGELOG.md ) |
| 258 |
- |
| 259 |
-src_unpack() { |
| 260 |
- if [[ ${PV} != *9999 ]]; then |
| 261 |
- default |
| 262 |
- else |
| 263 |
- git-r3_src_unpack |
| 264 |
- if use doc; then |
| 265 |
- EGIT_REPO_URI="git://github.com/${PN/-//}-manual.git https://github.com/${PN/-//}-manual.git" |
| 266 |
- EGIT_BRANCH="master" |
| 267 |
- EGIT_CHECKOUT_DIR="${WORKDIR}/${PN}-manual"\ |
| 268 |
- git-r3_src_unpack |
| 269 |
- fi |
| 270 |
- if use examples; then |
| 271 |
- EGIT_REPO_URI="git://github.com/${PN/-//}-tutorials.git https://github.com/${PN/-//}-tutorials.git" |
| 272 |
- EGIT_BRANCH="master" |
| 273 |
- EGIT_CHECKOUT_DIR="${WORKDIR}/${PN#votca-}-tutorials"\ |
| 274 |
- git-r3_src_unpack |
| 275 |
- fi |
| 276 |
- fi |
| 277 |
-} |
| 278 |
- |
| 279 |
-src_configure() { |
| 280 |
- mycmakeargs=( |
| 281 |
- -DWITH_GMX=$(usex gromacs) |
| 282 |
- -DWITH_H5MD=$(usex hdf5) |
| 283 |
- -DWITH_RC_FILES=OFF |
| 284 |
- -DLIB=$(get_libdir) |
| 285 |
- ) |
| 286 |
- cmake-utils_src_configure |
| 287 |
-} |
| 288 |
- |
| 289 |
-src_install() { |
| 290 |
- cmake-utils_src_install |
| 291 |
- newbashcomp scripts/csg-completion.bash csg_call |
| 292 |
- for i in "${ED}"/usr/bin/csg_*; do |
| 293 |
- [[ ${i} = *csg_call ]] && continue |
| 294 |
- bashcomp_alias csg_call "${i##*/}" |
| 295 |
- done |
| 296 |
- if use doc; then |
| 297 |
- if [[ ${PV} = *9999* ]]; then |
| 298 |
- #we need to do that here, because we need an installed version of csg to build the manual |
| 299 |
- [[ ${CHOST} = *-darwin* ]] && \ |
| 300 |
- emake -C "${WORKDIR}/${PN}"-manual PATH="${PATH}${PATH:+:}${ED}/usr/bin" DYLD_LIBRARY_PATH="${DYLD_LIBRARY_PATH}${DYLD_LIBRARY_PATH:+:}${ED}/usr/$(get_libdir)" \ |
| 301 |
- || emake -C "${WORKDIR}/${PN}"-manual PATH="${PATH}${PATH:+:}${ED}/usr/bin" LD_LIBRARY_PATH="${LD_LIBRARY_PATH}${LD_LIBRARY_PATH:+:}${ED}/usr/$(get_libdir)" |
| 302 |
- newdoc "${WORKDIR}/${PN}"-manual/manual.pdf "${PN}-manual-${PV}.pdf" |
| 303 |
- else |
| 304 |
- dodoc "${DISTDIR}/${PN}-manual-${PV}.pdf" |
| 305 |
- fi |
| 306 |
- cmake-utils_src_make -C "${CMAKE_BUILD_DIR}" html |
| 307 |
- dodoc -r "${CMAKE_BUILD_DIR}"/share/doc/html |
| 308 |
- fi |
| 309 |
- if use examples; then |
| 310 |
- insinto "/usr/share/doc/${PF}/tutorials" |
| 311 |
- docompress -x "/usr/share/doc/${PF}/tutorials" |
| 312 |
- rm -rf "${WORKDIR}/${PN#votca-}"-tutorials*/CMake* |
| 313 |
- doins -r "${WORKDIR}/${PN#votca-}"-tutorials*/* |
| 314 |
- fi |
| 315 |
-} |
| 316 |
- |
| 317 |
-pkg_postinst() { |
| 318 |
- einfo |
| 319 |
- einfo "Please read and cite:" |
| 320 |
- einfo "VOTCA, J. Chem. Theory Comput. 5, 3211 (2009). " |
| 321 |
- einfo "http://dx.doi.org/10.1021/ct900369w" |
| 322 |
- einfo |
| 323 |
-} |
| 324 |
|
| 325 |
diff --git a/sci-chemistry/votca-csg/votca-csg-1.3.1.ebuild b/sci-chemistry/votca-csg/votca-csg-1.3.1.ebuild |
| 326 |
deleted file mode 100644 |
| 327 |
index 105fc90..00000000 |
| 328 |
--- a/sci-chemistry/votca-csg/votca-csg-1.3.1.ebuild |
| 329 |
+++ /dev/null |
| 330 |
@@ -1,114 +0,0 @@ |
| 331 |
-# Copyright 1999-2016 Gentoo Foundation |
| 332 |
-# Distributed under the terms of the GNU General Public License v2 |
| 333 |
-# $Id$ |
| 334 |
- |
| 335 |
-EAPI=6 |
| 336 |
- |
| 337 |
-CMAKE_MAKEFILE_GENERATOR="ninja" |
| 338 |
- |
| 339 |
-inherit bash-completion-r1 cmake-utils multilib |
| 340 |
- |
| 341 |
-IUSE="doc examples extras +gromacs hdf5" |
| 342 |
-PDEPEND="extras? ( =sci-chemistry/${PN}apps-${PV} )" |
| 343 |
-if [ "${PV}" != "9999" ]; then |
| 344 |
- SRC_URI="https://github.com/${PN/-//}/archive/v${PV}.tar.gz -> ${P}.tar.gz |
| 345 |
- doc? ( https://github.com/${PN/-//}-manual/releases/download/v${PV}/${PN}-manual-${PV}.pdf ) |
| 346 |
- examples? ( https://github.com/${PN/-//}-tutorials/archive/v${PV}.tar.gz -> ${PN}-tutorials-${PV}.tar.gz )" |
| 347 |
- KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-macos" |
| 348 |
- S="${WORKDIR}/${P#votca-}" |
| 349 |
-else |
| 350 |
- inherit git-r3 |
| 351 |
- EGIT_REPO_URI="git://github.com/${PN/-//}.git https://github.com/${PN/-//}.git" |
| 352 |
- KEYWORDS="" |
| 353 |
-fi |
| 354 |
- |
| 355 |
-DESCRIPTION="Votca coarse-graining engine" |
| 356 |
-HOMEPAGE="http://www.votca.org" |
| 357 |
- |
| 358 |
-LICENSE="Apache-2.0" |
| 359 |
-SLOT="0" |
| 360 |
- |
| 361 |
-RDEPEND=" |
| 362 |
- =sci-libs/votca-tools-${PV} |
| 363 |
- gromacs? ( sci-chemistry/gromacs:= ) |
| 364 |
- hdf5? ( sci-libs/hdf5[cxx] ) |
| 365 |
- dev-lang/perl |
| 366 |
- app-shells/bash:*" |
| 367 |
- |
| 368 |
-DEPEND="${RDEPEND} |
| 369 |
- doc? ( |
| 370 |
- app-doc/doxygen[dot] |
| 371 |
- dev-texlive/texlive-latexextra |
| 372 |
- virtual/latex-base |
| 373 |
- dev-tex/pgf |
| 374 |
- ) |
| 375 |
- >=app-text/txt2tags-2.5 |
| 376 |
- virtual/pkgconfig" |
| 377 |
- |
| 378 |
-DOCS=( README.md NOTICE CHANGELOG.md ) |
| 379 |
- |
| 380 |
-src_unpack() { |
| 381 |
- if [[ ${PV} != *9999 ]]; then |
| 382 |
- default |
| 383 |
- else |
| 384 |
- git-r3_src_unpack |
| 385 |
- if use doc; then |
| 386 |
- EGIT_REPO_URI="git://github.com/${PN/-//}-manual.git https://github.com/${PN/-//}-manual.git" |
| 387 |
- EGIT_BRANCH="master" |
| 388 |
- EGIT_CHECKOUT_DIR="${WORKDIR}/${PN}-manual"\ |
| 389 |
- git-r3_src_unpack |
| 390 |
- fi |
| 391 |
- if use examples; then |
| 392 |
- EGIT_REPO_URI="git://github.com/${PN/-//}-tutorials.git https://github.com/${PN/-//}-tutorials.git" |
| 393 |
- EGIT_BRANCH="master" |
| 394 |
- EGIT_CHECKOUT_DIR="${WORKDIR}/${PN#votca-}-tutorials"\ |
| 395 |
- git-r3_src_unpack |
| 396 |
- fi |
| 397 |
- fi |
| 398 |
-} |
| 399 |
- |
| 400 |
-src_configure() { |
| 401 |
- mycmakeargs=( |
| 402 |
- -DWITH_GMX=$(usex gromacs) |
| 403 |
- -DWITH_H5MD=$(usex hdf5) |
| 404 |
- -DWITH_RC_FILES=OFF |
| 405 |
- -DLIB=$(get_libdir) |
| 406 |
- ) |
| 407 |
- cmake-utils_src_configure |
| 408 |
-} |
| 409 |
- |
| 410 |
-src_install() { |
| 411 |
- cmake-utils_src_install |
| 412 |
- newbashcomp scripts/csg-completion.bash csg_call |
| 413 |
- for i in "${ED}"/usr/bin/csg_*; do |
| 414 |
- [[ ${i} = *csg_call ]] && continue |
| 415 |
- bashcomp_alias csg_call "${i##*/}" |
| 416 |
- done |
| 417 |
- if use doc; then |
| 418 |
- if [[ ${PV} = *9999* ]]; then |
| 419 |
- #we need to do that here, because we need an installed version of csg to build the manual |
| 420 |
- [[ ${CHOST} = *-darwin* ]] && \ |
| 421 |
- emake -C "${WORKDIR}/${PN}"-manual PATH="${PATH}${PATH:+:}${ED}/usr/bin" DYLD_LIBRARY_PATH="${DYLD_LIBRARY_PATH}${DYLD_LIBRARY_PATH:+:}${ED}/usr/$(get_libdir)" \ |
| 422 |
- || emake -C "${WORKDIR}/${PN}"-manual PATH="${PATH}${PATH:+:}${ED}/usr/bin" LD_LIBRARY_PATH="${LD_LIBRARY_PATH}${LD_LIBRARY_PATH:+:}${ED}/usr/$(get_libdir)" |
| 423 |
- newdoc "${WORKDIR}/${PN}"-manual/manual.pdf "${PN}-manual-${PV}.pdf" |
| 424 |
- else |
| 425 |
- dodoc "${DISTDIR}/${PN}-manual-${PV}.pdf" |
| 426 |
- fi |
| 427 |
- cmake-utils_src_make -C "${CMAKE_BUILD_DIR}" html |
| 428 |
- dodoc -r "${CMAKE_BUILD_DIR}"/share/doc/html |
| 429 |
- fi |
| 430 |
- if use examples; then |
| 431 |
- insinto "/usr/share/doc/${PF}/tutorials" |
| 432 |
- docompress -x "/usr/share/doc/${PF}/tutorials" |
| 433 |
- rm -rf "${WORKDIR}/${PN#votca-}"-tutorials*/CMake* |
| 434 |
- doins -r "${WORKDIR}/${PN#votca-}"-tutorials*/* |
| 435 |
- fi |
| 436 |
-} |
| 437 |
- |
| 438 |
-pkg_postinst() { |
| 439 |
- einfo |
| 440 |
- einfo "Please read and cite:" |
| 441 |
- einfo "VOTCA, J. Chem. Theory Comput. 5, 3211 (2009). " |
| 442 |
- einfo "http://dx.doi.org/10.1021/ct900369w" |
| 443 |
- einfo |
| 444 |
-} |
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