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| From: | "Andrey Kislyuk (weaver)" <weaver@g.o> |
|---|---|
| To: | gentoo-commits@l.g.o |
| Subject: | [gentoo-commits] gentoo-x86 commit in sci-biology/vcftools: metadata.xml ChangeLog vcftools-0.1.6.ebuild |
| Date: | Sun, 02 Oct 2011 20:05:07 |
| Message-Id: | 20111002200457.D5C452004B@flycatcher.gentoo.org |
| 1 | weaver 11/10/02 20:04:57 |
| 2 | |
| 3 | Added: metadata.xml ChangeLog vcftools-0.1.6.ebuild |
| 4 | Log: |
| 5 | New package, ebuild written by me |
| 6 | |
| 7 | (Portage version: 2.2.0_alpha45/cvs/Linux x86_64) |
| 8 | |
| 9 | Revision Changes Path |
| 10 | 1.1 sci-biology/vcftools/metadata.xml |
| 11 | |
| 12 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vcftools/metadata.xml?rev=1.1&view=markup |
| 13 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vcftools/metadata.xml?rev=1.1&content-type=text/plain |
| 14 | |
| 15 | Index: metadata.xml |
| 16 | =================================================================== |
| 17 | <?xml version="1.0" encoding="UTF-8"?> |
| 18 | <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
| 19 | <pkgmetadata> |
| 20 | <maintainer> |
| 21 | <email>weaver@g.o</email> |
| 22 | <name>Andrey Kislyuk</name> |
| 23 | </maintainer> |
| 24 | <herd>sci-biology</herd> |
| 25 | </pkgmetadata> |
| 26 | |
| 27 | |
| 28 | |
| 29 | 1.1 sci-biology/vcftools/ChangeLog |
| 30 | |
| 31 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vcftools/ChangeLog?rev=1.1&view=markup |
| 32 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vcftools/ChangeLog?rev=1.1&content-type=text/plain |
| 33 | |
| 34 | Index: ChangeLog |
| 35 | =================================================================== |
| 36 | # ChangeLog for sci-biology/vcftools |
| 37 | # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 |
| 38 | # $Header: /var/cvsroot/gentoo-x86/sci-biology/vcftools/ChangeLog,v 1.1 2011/10/02 20:04:57 weaver Exp $ |
| 39 | |
| 40 | *vcftools-0.1.6 (02 Oct 2011) |
| 41 | |
| 42 | 02 Oct 2011; Andrey Kislyuk <weaver@g.o> +vcftools-0.1.6.ebuild, |
| 43 | +metadata.xml: |
| 44 | New package, ebuild written by me |
| 45 | |
| 46 | |
| 47 | |
| 48 | |
| 49 | 1.1 sci-biology/vcftools/vcftools-0.1.6.ebuild |
| 50 | |
| 51 | file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vcftools/vcftools-0.1.6.ebuild?rev=1.1&view=markup |
| 52 | plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vcftools/vcftools-0.1.6.ebuild?rev=1.1&content-type=text/plain |
| 53 | |
| 54 | Index: vcftools-0.1.6.ebuild |
| 55 | =================================================================== |
| 56 | # Copyright 1999-2011 Gentoo Foundation |
| 57 | # Distributed under the terms of the GNU General Public License v2 |
| 58 | # $Header: /var/cvsroot/gentoo-x86/sci-biology/vcftools/vcftools-0.1.6.ebuild,v 1.1 2011/10/02 20:04:57 weaver Exp $ |
| 59 | |
| 60 | EAPI=4 |
| 61 | |
| 62 | MY_P="${PN}_${PV}" |
| 63 | |
| 64 | DESCRIPTION="Tools for working with VCF (Variant Call Format) files" |
| 65 | HOMEPAGE="http://vcftools.sourceforge.net/" |
| 66 | SRC_URI="mirror://sourceforge/${PN}/${MY_P}.tar.gz" |
| 67 | |
| 68 | LICENSE="GPL-3" |
| 69 | SLOT="0" |
| 70 | KEYWORDS="~x86 ~amd64" |
| 71 | IUSE="" |
| 72 | |
| 73 | S="${WORKDIR}/${MY_P}" |
| 74 | |
| 75 | src_prepare() { |
| 76 | sed -i -e "s/CPPFLAGS =/CPPFLAGS = $CXXFLAGS /" \ |
| 77 | -e "s/LIB =/LIB = $LDFLAGS /" cpp/Makefile || die |
| 78 | } |
| 79 | |
| 80 | src_install(){ |
| 81 | dobin bin/* |
| 82 | insinto /usr/share/${PN}/perl |
| 83 | doins perl/*.pm |
| 84 | exeinto /usr/share/${PN}/perl |
| 85 | doexe perl/{fill,vcf}-* |
| 86 | dodoc README.txt |
| 87 | } |