[gentoo-commits] gentoo-x86 commit in sci-biology/clustalx: ChangeLog clustalx-2.0.9.ebuild

[Olivier Fisette (ribosome)]

ribosome    08/08/28 21:18:34

  Modified:             ChangeLog
  Added:                clustalx-2.0.9.ebuild
  Log:
  New upstream version.
  (Portage version: 2.1.4.4)

Revision  Changes    Path
1.16                 sci-biology/clustalx/ChangeLog

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/clustalx/ChangeLog?rev=1.16&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/clustalx/ChangeLog?rev=1.16&content-type=text/plain
diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/clustalx/ChangeLog?r1=1.15&r2=1.16

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/clustalx/ChangeLog,v
retrieving revision 1.15
retrieving revision 1.16
diff -u -r1.15 -r1.16
--- ChangeLog	27 Aug 2008 23:15:53 -0000	1.15
+++ ChangeLog	28 Aug 2008 21:18:33 -0000	1.16
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/clustalx
 # Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/ChangeLog,v 1.15 2008/08/27 23:15:53 ribosome Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/ChangeLog,v 1.16 2008/08/28 21:18:33 ribosome Exp $
+
+*clustalx-2.0.9 (28 Aug 2008)
+
+  28 Aug 2008; Olivier Fisette <ribosome@g.o> +clustalx-2.0.9.ebuild:
+  New upstream version (complete rewrite based on Qt).
 
   27 Aug 2008; Olivier Fisette <ribosome@g.o>
   clustalx-1.83-r2.ebuild:



1.1                  sci-biology/clustalx/clustalx-2.0.9.ebuild

file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/clustalx/clustalx-2.0.9.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/clustalx/clustalx-2.0.9.ebuild?rev=1.1&content-type=text/plain

Index: clustalx-2.0.9.ebuild
===================================================================
# Copyright 1999-2008 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/clustalx-2.0.9.ebuild,v 1.1 2008/08/28 21:18:33 ribosome Exp $

EAPI=1

inherit qt4 eutils

DESCRIPTION="Graphical interface for the ClustalW multiple alignment program"
HOMEPAGE="http://www.ebi.ac.uk/tools/clustalw2/"
SRC_URI="ftp://ftp.ebi.ac.uk/pub/software/clustalw2/${PV}/${P}-src.tar.gz"

LICENSE="clustalw"
SLOT="0"
KEYWORDS="~x86"
IUSE=""

DEPEND="x11-libs/qt:4"

RDEPEND="sci-biology/clustalw:2"

src_unpack() {
	unpack ${A}
	cd "${S}"
	sed -e "s|colprot.xml|/usr/share/${PN}/colprot.xml|" \
			-e "s|coldna.xml|/usr/share/${PN}/coldna.xml|" \
			-e "s|colprint.xml|/usr/share/${PN}/colprint.xml|" \
			-i ClustalQtParams.h || \
			die "Failed to patch shared files location."
	sed -e "s|clustalx.hlp|/usr/share/${PN}/clustalx.hlp|" \
			-i HelpDisplayWidget.cpp || \
			die "Failed to patch help file location."
}

src_compile() {
	eqmake4
	emake || die "Compilation failed."
}

src_install() {
	dobin clustalx || die "Failed to install program."
	insinto "/usr/share/${PN}"
	doins colprot.xml coldna.xml colprint.xml clustalx.hlp || \
			die "Failed to install shared files."
	make_desktop_entry ${PN} ClustalX "" "Application;Science"
}