Gentoo Archives: gentoo-commits

From: "Olivier Fisette (ribosome)" <ribosome@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] gentoo-x86 commit in sci-biology/emboss: ChangeLog emboss-6.0.1.ebuild emboss-4.0.0.ebuild
Date: Mon, 31 Aug 2009 16:32:37
Message-Id: E1MiEcx-0006bj-7L@stork.gentoo.org
1 ribosome 09/08/31 21:41:27
2
3 Modified: ChangeLog emboss-6.0.1.ebuild emboss-4.0.0.ebuild
4 Log:
5 Q.A. fixes, including better dependency on ClustalW.
6 (Portage version: 2.2_rc40/cvs/Linux x86_64)
7
8 Revision Changes Path
9 1.50 sci-biology/emboss/ChangeLog
10
11 file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/emboss/ChangeLog?rev=1.50&view=markup
12 plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/emboss/ChangeLog?rev=1.50&content-type=text/plain
13 diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/emboss/ChangeLog?r1=1.49&r2=1.50
14
15 Index: ChangeLog
16 ===================================================================
17 RCS file: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v
18 retrieving revision 1.49
19 retrieving revision 1.50
20 diff -u -r1.49 -r1.50
21 --- ChangeLog 27 Aug 2008 21:59:28 -0000 1.49
22 +++ ChangeLog 31 Aug 2009 21:41:26 -0000 1.50
23 @@ -1,6 +1,10 @@
24 # ChangeLog for sci-biology/emboss
25 -# Copyright 2000-2008 Gentoo Foundation; Distributed under the GPL v2
26 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v 1.49 2008/08/27 21:59:28 ribosome Exp $
27 +# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
28 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/ChangeLog,v 1.50 2009/08/31 21:41:26 ribosome Exp $
29 +
30 + 31 Aug 2009; Olivier Fisette <ribosome@g.o> emboss-4.0.0.ebuild,
31 + emboss-6.0.1.ebuild:
32 + Q.A. fixes, including better dependency on ClustalW.
33
34 27 Aug 2008; Olivier Fisette <ribosome@g.o> -emboss-5.0.0.ebuild:
35 Pruning version that will never be stabilised.
36
37
38
39 1.2 sci-biology/emboss/emboss-6.0.1.ebuild
40
41 file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/emboss/emboss-6.0.1.ebuild?rev=1.2&view=markup
42 plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/emboss/emboss-6.0.1.ebuild?rev=1.2&content-type=text/plain
43 diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/emboss/emboss-6.0.1.ebuild?r1=1.1&r2=1.2
44
45 Index: emboss-6.0.1.ebuild
46 ===================================================================
47 RCS file: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-6.0.1.ebuild,v
48 retrieving revision 1.1
49 retrieving revision 1.2
50 diff -u -r1.1 -r1.2
51 --- emboss-6.0.1.ebuild 26 Aug 2008 18:51:27 -0000 1.1
52 +++ emboss-6.0.1.ebuild 31 Aug 2009 21:41:26 -0000 1.2
53 @@ -1,6 +1,8 @@
54 -# Copyright 1999-2008 Gentoo Foundation
55 +# Copyright 1999-2009 Gentoo Foundation
56 # Distributed under the terms of the GNU General Public License v2
57 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-6.0.1.ebuild,v 1.1 2008/08/26 18:51:27 ribosome Exp $
58 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-6.0.1.ebuild,v 1.2 2009/08/31 21:41:26 ribosome Exp $
59 +
60 +EAPI=1
61
62 inherit eutils
63
64 @@ -21,9 +23,11 @@
65 )
66 !minimal? (
67 sci-biology/primer3
68 - sci-biology/clustalw
69 + sci-biology/clustalw:1
70 )"
71
72 +RDEPEND="${DEPEND}"
73 +
74 PDEPEND="!minimal? (
75 sci-biology/aaindex
76 sci-biology/cutg
77
78
79
80 1.12 sci-biology/emboss/emboss-4.0.0.ebuild
81
82 file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/emboss/emboss-4.0.0.ebuild?rev=1.12&view=markup
83 plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/emboss/emboss-4.0.0.ebuild?rev=1.12&content-type=text/plain
84 diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/emboss/emboss-4.0.0.ebuild?r1=1.11&r2=1.12
85
86 Index: emboss-4.0.0.ebuild
87 ===================================================================
88 RCS file: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-4.0.0.ebuild,v
89 retrieving revision 1.11
90 retrieving revision 1.12
91 diff -u -r1.11 -r1.12
92 --- emboss-4.0.0.ebuild 27 Aug 2008 21:28:36 -0000 1.11
93 +++ emboss-4.0.0.ebuild 31 Aug 2009 21:41:26 -0000 1.12
94 @@ -1,6 +1,8 @@
95 -# Copyright 1999-2008 Gentoo Foundation
96 +# Copyright 1999-2009 Gentoo Foundation
97 # Distributed under the terms of the GNU General Public License v2
98 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-4.0.0.ebuild,v 1.11 2008/08/27 21:28:36 ribosome Exp $
99 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/emboss/emboss-4.0.0.ebuild,v 1.12 2009/08/31 21:41:26 ribosome Exp $
100 +
101 +EAPI=1
102
103 DESCRIPTION="The European Molecular Biology Open Software Suite - A sequence analysis package"
104 HOMEPAGE="http://emboss.sourceforge.net/"
105 @@ -19,10 +21,12 @@
106 )
107 !minimal? (
108 sci-biology/primer3
109 - ~sci-biology/clustalw-1.83
110 + sci-biology/clustalw:1
111 )
112 !<dev-util/pscan-20000721-r1"
113
114 +RDEPEND="${DEPEND}"
115 +
116 PDEPEND="!minimal? (
117 sci-biology/aaindex
118 sci-biology/cutg