[gentoo-commits] repo/gentoo:master commit in: sci-physics/sassena/files/, sci-physics/sassena/, profiles/

[Jakov Smolić]

commit:     ba86737974866cf5bb36e28a66b9daabfb8d6cde
Author:     Jakov Smolić <jsmolic <AT> gentoo <DOT> org>
AuthorDate: Thu Sep  2 20:28:45 2021 +0000
Commit:     Jakov Smolić <jsmolic <AT> gentoo <DOT> org>
CommitDate: Thu Sep  2 20:35:33 2021 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=ba867379

sci-physics/sassena: Remove last-rited package

Closes: https://bugs.gentoo.org/741646
Closes: https://bugs.gentoo.org/792993
Signed-off-by: Jakov Smolić <jsmolic <AT> gentoo.org>

 profiles/package.mask                              |  5 --
 sci-physics/sassena/Manifest                       |  1 -
 .../files/sassena-1.4.2_cmake-remove-missing.patch | 33 --------
 .../files/sassena-1.4.2_link_boost_thread.patch    | 92 ----------------------
 .../sassena/files/sassena-1.4.2_uint32_t.patch     | 11 ---
 sci-physics/sassena/metadata.xml                   | 11 ---
 sci-physics/sassena/sassena-1.4.2.ebuild           | 32 --------
 7 files changed, 185 deletions(-)

diff --git a/profiles/package.mask b/profiles/package.mask
index f60e9b74435..116fdca2715 100644
--- a/profiles/package.mask
+++ b/profiles/package.mask
@@ -200,11 +200,6 @@ app-backup/zbackup
 # Removal on 2021-09-04.
 net-misc/stargazer
 
-# Sam James <sam@g.o> (2021-08-04)
-# Fails to build with GCC 11 and has Boost incompatibility issues.
-# bug #741646, bug #792993. Removal on 2021-09-04.
-sci-physics/sassena
-
 # David Seifert <soap@g.o> (2021-08-04)
 # Last release over 4 years ago, upstream pretty much dead, the
 # ecosystem has switched to dev-util/pkgconf, which is alive. Testing

diff --git a/sci-physics/sassena/Manifest b/sci-physics/sassena/Manifest
deleted file mode 100644
index f414a33d4ca..00000000000
--- a/sci-physics/sassena/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST sassena-1.4.2.tar.gz 783708 BLAKE2B eef37655c50831f50bfd7f9d66b98d30820661682c78d9fc0f24bf4cc924dfff3a2ce3d116a8fe1161522907825a1bbaaef5d61bf8edb20094bc37606cf87c88 SHA512 07dbd44494a50de29b6f3b3542d862328726d132bda097352ac2f6ad24479b93b2d77c5ea2ef812b2956d0ac950ad69b93da0996f14ff1ce9f0e310b27728942

diff --git a/sci-physics/sassena/files/sassena-1.4.2_cmake-remove-missing.patch b/sci-physics/sassena/files/sassena-1.4.2_cmake-remove-missing.patch
deleted file mode 100644
index 7131d351452..00000000000
--- a/sci-physics/sassena/files/sassena-1.4.2_cmake-remove-missing.patch
+++ /dev/null
@@ -1,33 +0,0 @@
-diff -ru sassena-1.4.2_org/cmake/CMakeLists.txt.executables sassena-1.4.2/cmake/CMakeLists.txt.executables
---- sassena-1.4.2_org/cmake/CMakeLists.txt.executables	2014-07-29 11:02:12.652053749 +0200
-+++ sassena-1.4.2/cmake/CMakeLists.txt.executables	2014-07-29 11:04:57.831042602 +0200
-@@ -18,18 +18,12 @@
-     tests/unit_broadcast.cpp
- )
- 
--ADD_EXECUTABLE(unit_parameters 
--	src/common.cpp
--    tests/unit_parameters.cpp
--)
--
- 
- IF(STATIC)
- SET_TARGET_PROPERTIES(sassena PROPERTIES LINK_SEARCH_END_STATIC 1)
- SET_TARGET_PROPERTIES(s_stage PROPERTIES LINK_SEARCH_END_STATIC 1)
- SET_TARGET_PROPERTIES(s_maketnx PROPERTIES LINK_SEARCH_END_STATIC 1)
- SET_TARGET_PROPERTIES(unit_broadcast PROPERTIES LINK_SEARCH_END_STATIC 1)
--SET_TARGET_PROPERTIES(unit_parameters PROPERTIES LINK_SEARCH_END_STATIC 1)
- ENDIF(STATIC)
- 
- TARGET_LINK_LIBRARIES (s_stage 
-@@ -89,10 +83,4 @@
- 	${BOOST_LIBRARIES}
- )
- 
--TARGET_LINK_LIBRARIES (unit_parameters 
--	sass_log
--	sass_controlio
--	${BOOST_LIBRARIES}
--)
--
- INSTALL(TARGETS unit_broadcast RUNTIME DESTINATION bin)

diff --git a/sci-physics/sassena/files/sassena-1.4.2_link_boost_thread.patch b/sci-physics/sassena/files/sassena-1.4.2_link_boost_thread.patch
deleted file mode 100644
index 424ca381a51..00000000000
--- a/sci-physics/sassena/files/sassena-1.4.2_link_boost_thread.patch
+++ /dev/null
@@ -1,92 +0,0 @@
-diff -ru sassena-1.4.2_org/src/main/sassena.cpp sassena-1.4.2/src/main/sassena.cpp
---- sassena-1.4.2_org/src/main/sassena.cpp	2014-07-29 11:02:12.650053749 +0200
-+++ sassena-1.4.2/src/main/sassena.cpp	2014-07-29 12:52:56.978605357 +0200
-@@ -62,6 +62,7 @@
- #include <boost/serialization/complex.hpp>
- #include <boost/serialization/map.hpp>
- #include <boost/serialization/vector.hpp>
-+#include <boost/thread/thread.hpp>
- 
- // other headers
- #include "exceptions/exceptions.hpp"
-Nur in sassena-1.4.2/src/main: .sassena.cpp.swp.
-diff -ru sassena-1.4.2_org/src/main/s_stage.cpp sassena-1.4.2/src/main/s_stage.cpp
---- sassena-1.4.2_org/src/main/s_stage.cpp	2014-07-29 11:02:12.650053749 +0200
-+++ sassena-1.4.2/src/main/s_stage.cpp	2014-07-29 12:51:22.257611749 +0200
-@@ -33,6 +33,7 @@
- #include <boost/serialization/complex.hpp>
- #include <boost/serialization/map.hpp>
- #include <boost/serialization/vector.hpp>
-+#include <boost/thread/thread.hpp>
- 
- // other headers
- #include "exceptions/exceptions.hpp"
-diff -ru sassena-1.4.2_org/src/scatter_devices/abstract_scatter_device.cpp sassena-1.4.2/src/scatter_devices/abstract_scatter_device.cpp
---- sassena-1.4.2_org/src/scatter_devices/abstract_scatter_device.cpp	2014-07-29 11:02:12.650053749 +0200
-+++ sassena-1.4.2/src/scatter_devices/abstract_scatter_device.cpp	2014-07-29 13:02:20.824567306 +0200
-@@ -18,6 +18,7 @@
- #include <boost/accumulators/accumulators.hpp>
- #include <boost/accumulators/statistics.hpp>
- #include <boost/lexical_cast.hpp>
-+#include <boost/thread/thread.hpp>
- 
- // other headers
- #include "exceptions/exceptions.hpp"
-Nur in sassena-1.4.2/src/scatter_devices: .abstract_scatter_device.cpp.swp.
-diff -ru sassena-1.4.2_org/src/scatter_devices/all_vectors_scatter_device.cpp sassena-1.4.2/src/scatter_devices/all_vectors_scatter_device.cpp
---- sassena-1.4.2_org/src/scatter_devices/all_vectors_scatter_device.cpp	2014-07-29 11:02:12.649053750 +0200
-+++ sassena-1.4.2/src/scatter_devices/all_vectors_scatter_device.cpp	2014-07-29 13:04:04.907560282 +0200
-@@ -18,6 +18,7 @@
- #include <boost/accumulators/accumulators.hpp>
- #include <boost/accumulators/statistics.hpp>
- #include <boost/lexical_cast.hpp>
-+#include <boost/thread/thread.hpp>
- 
- // other headers
- #include "math/coor3d.hpp"
-Nur in sassena-1.4.2/src/scatter_devices: .all_vectors_scatter_device.cpp.swp.
-diff -ru sassena-1.4.2_org/src/scatter_devices/multipole_scatter_device.cpp sassena-1.4.2/src/scatter_devices/multipole_scatter_device.cpp
---- sassena-1.4.2_org/src/scatter_devices/multipole_scatter_device.cpp	2014-07-29 11:02:12.649053750 +0200
-+++ sassena-1.4.2/src/scatter_devices/multipole_scatter_device.cpp	2014-07-29 13:01:16.038571678 +0200
-@@ -19,6 +19,7 @@
- #include <boost/accumulators/statistics.hpp>
- #include <boost/lexical_cast.hpp>
- #include <boost/math/special_functions.hpp>
-+#include <boost/thread/thread.hpp>
- 
- // other headers
- #include "math/coor3d.hpp"
-diff -ru sassena-1.4.2_org/src/scatter_devices/self_vectors_scatter_device.cpp sassena-1.4.2/src/scatter_devices/self_vectors_scatter_device.cpp
---- sassena-1.4.2_org/src/scatter_devices/self_vectors_scatter_device.cpp	2014-07-29 11:02:12.650053749 +0200
-+++ sassena-1.4.2/src/scatter_devices/self_vectors_scatter_device.cpp	2014-07-29 13:01:45.753569673 +0200
-@@ -18,6 +18,7 @@
- #include <boost/accumulators/accumulators.hpp>
- #include <boost/accumulators/statistics.hpp>
- #include <boost/lexical_cast.hpp>
-+#include <boost/thread/thread.hpp>
- 
- // other headers
- #include "math/coor3d.hpp"
-diff -ru sassena-1.4.2_org/src/services/file_writer_service.cpp sassena-1.4.2/src/services/file_writer_service.cpp
---- sassena-1.4.2_org/src/services/file_writer_service.cpp	2014-07-29 11:02:12.650053749 +0200
-+++ sassena-1.4.2/src/services/file_writer_service.cpp	2014-07-29 13:08:07.448543914 +0200
-@@ -13,6 +13,7 @@
- 
- #include <boost/lexical_cast.hpp>
- #include <boost/filesystem.hpp>
-+#include <boost/thread/thread.hpp>
- #include <log.hpp>
- #include <control.hpp>
- #include <math/smath.hpp>
-Nur in sassena-1.4.2/src/services: .file_writer_service.cpp.swp.
-diff -ru sassena-1.4.2_org/src/services/monitor_service.cpp sassena-1.4.2/src/services/monitor_service.cpp
---- sassena-1.4.2_org/src/services/monitor_service.cpp	2014-07-29 11:02:12.650053749 +0200
-+++ sassena-1.4.2/src/services/monitor_service.cpp	2014-07-29 13:07:06.617548019 +0200
-@@ -13,6 +13,7 @@
- #include <boost/lexical_cast.hpp>
- #include <boost/filesystem.hpp>
- #include <boost/random/uniform_int.hpp>
-+#include <boost/thread/thread.hpp>
- #include <log.hpp>
- #include <control.hpp>
- #include <report/timer.hpp>

diff --git a/sci-physics/sassena/files/sassena-1.4.2_uint32_t.patch b/sci-physics/sassena/files/sassena-1.4.2_uint32_t.patch
deleted file mode 100644
index ecb6e845a6b..00000000000
--- a/sci-physics/sassena/files/sassena-1.4.2_uint32_t.patch
+++ /dev/null
@@ -1,11 +0,0 @@
-diff -ru sassena-1.4.2_org/src/sample/frames.cpp sassena-1.4.2/src/sample/frames.cpp
---- sassena-1.4.2_org/src/sample/frames.cpp	2014-07-29 11:02:12.651053749 +0200
-+++ sassena-1.4.2/src/sample/frames.cpp	2014-07-29 11:11:39.229015514 +0200
-@@ -298,6 +298,7 @@
- 	dcdfile.seekg(marker,ios_base::cur);
- 	dcdfile.read((char*) &marker,sizeof(int32_t));
- 
-+    using boost::uint32_t;
- 	uint32_t noa;
- 	dcdfile.read((char*) &marker,sizeof(int32_t));
- 	dcdfile.read((char*) &noa,sizeof(uint32_t));

diff --git a/sci-physics/sassena/metadata.xml b/sci-physics/sassena/metadata.xml
deleted file mode 100644
index 4fac2fa0153..00000000000
--- a/sci-physics/sassena/metadata.xml
+++ /dev/null
@@ -1,11 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer type="person">
-		<email>alexxy@g.o</email>
-		<name>Alexey Shvetsov</name>
-	</maintainer>
-	<upstream>
-		<remote-id type="github">benlabs/sassena</remote-id>
-	</upstream>
-</pkgmetadata>

diff --git a/sci-physics/sassena/sassena-1.4.2.ebuild b/sci-physics/sassena/sassena-1.4.2.ebuild
deleted file mode 100644
index 8931b9bc422..00000000000
--- a/sci-physics/sassena/sassena-1.4.2.ebuild
+++ /dev/null
@@ -1,32 +0,0 @@
-# Copyright 1999-2018 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit cmake-utils
-
-DESCRIPTION="Software for Calculating Scattering Diagrams on Massively Parallel Computers"
-HOMEPAGE="https://github.com/benlabs/sassena"
-SRC_URI="https://github.com/benlabs/sassena/archive/v${PV}.tar.gz -> ${P}.tar.gz"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux"
-IUSE=""
-
-DEPEND="
-	dev-libs/boost[mpi]
-	dev-libs/libxml2
-	sci-libs/fftw:3.0
-	sci-libs/hdf5[mpi]
-	virtual/blas
-	virtual/lapack
-	virtual/mpi
-"
-RDEPEND="${DEPEND}"
-
-PATCHES=(
-	"${FILESDIR}/${P}_cmake-remove-missing.patch"
-	"${FILESDIR}/${P}_uint32_t.patch"
-	"${FILESDIR}/${P}_link_boost_thread.patch"
-)