| 1 |
commit: 53562c6fe46a84363a92dca87a7e4e4c6f78f77f |
| 2 |
Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
| 3 |
AuthorDate: Sun Mar 23 16:33:19 2014 +0000 |
| 4 |
Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
| 5 |
CommitDate: Sun Mar 23 16:33:19 2014 +0000 |
| 6 |
URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=53562c6f |
| 7 |
|
| 8 |
sci-biology/flexbar: new package, needs >=sci-biology/seqan-1.4.1 to appear first in the tree |
| 9 |
|
| 10 |
Package-Manager: portage-2.2.7 |
| 11 |
|
| 12 |
--- |
| 13 |
sci-biology/flexbar/ChangeLog | 10 ++++++++++ |
| 14 |
sci-biology/flexbar/flexbar-2.4.ebuild | 23 +++++++++++++++++++++++ |
| 15 |
sci-biology/flexbar/metadata.xml | 9 +++++++++ |
| 16 |
3 files changed, 42 insertions(+) |
| 17 |
|
| 18 |
diff --git a/sci-biology/flexbar/ChangeLog b/sci-biology/flexbar/ChangeLog |
| 19 |
new file mode 100644 |
| 20 |
index 0000000..371eef0 |
| 21 |
--- /dev/null |
| 22 |
+++ b/sci-biology/flexbar/ChangeLog |
| 23 |
@@ -0,0 +1,10 @@ |
| 24 |
+# ChangeLog for sci-biology/flexbar |
| 25 |
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 |
| 26 |
+# $Header: $ |
| 27 |
+ |
| 28 |
+*flexbar-2.4 (23 Mar 2014) |
| 29 |
+ |
| 30 |
+ 23 Mar 2014; Martin Mokrejs <mmokrejs@×××××××××××××××.cz> +flexbar-2.4.ebuild, |
| 31 |
+ +metadata.xml: |
| 32 |
+ sci-biology/flexbar: new package, needs >=sci-biology/seqan-1.4.1 to appear |
| 33 |
+ first in the tree |
| 34 |
|
| 35 |
diff --git a/sci-biology/flexbar/flexbar-2.4.ebuild b/sci-biology/flexbar/flexbar-2.4.ebuild |
| 36 |
new file mode 100644 |
| 37 |
index 0000000..5b65338 |
| 38 |
--- /dev/null |
| 39 |
+++ b/sci-biology/flexbar/flexbar-2.4.ebuild |
| 40 |
@@ -0,0 +1,23 @@ |
| 41 |
+# Copyright 1999-2014 Gentoo Foundation |
| 42 |
+# Distributed under the terms of the GNU General Public License v2 |
| 43 |
+# $Header: $ |
| 44 |
+ |
| 45 |
+EAPI=5 |
| 46 |
+ |
| 47 |
+inherit cmake-utils |
| 48 |
+ |
| 49 |
+DESCRIPTION="Barcode, MID tag and adapter sequence removal" |
| 50 |
+HOMEPAGE="https://sourceforge.net/p/flexbar/wiki/Manual" |
| 51 |
+SRC_URI="http://sourceforge.net/projects/flexbar/files/2.4/flexbar_v2.4_src.tgz" |
| 52 |
+ |
| 53 |
+LICENSE="GPL-3" |
| 54 |
+SLOT="0" |
| 55 |
+KEYWORDS="" |
| 56 |
+IUSE="" |
| 57 |
+ |
| 58 |
+CDEPEND="dev-cpp/tbb |
| 59 |
+ >=sci-biology/seqan-1.4.1" |
| 60 |
+DEPEND="${CDEPEND}" |
| 61 |
+RDEPEND="${CDEPEND}" |
| 62 |
+ |
| 63 |
+S="${WORKDIR}"/"${PN}"_v"${PV}"_src |
| 64 |
|
| 65 |
diff --git a/sci-biology/flexbar/metadata.xml b/sci-biology/flexbar/metadata.xml |
| 66 |
new file mode 100644 |
| 67 |
index 0000000..07b5255 |
| 68 |
--- /dev/null |
| 69 |
+++ b/sci-biology/flexbar/metadata.xml |
| 70 |
@@ -0,0 +1,9 @@ |
| 71 |
+<?xml version="1.0" encoding="UTF-8"?> |
| 72 |
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
| 73 |
+<pkgmetadata> |
| 74 |
+ <herd>sci-biology</herd> |
| 75 |
+ <maintainer> |
| 76 |
+ <email>mmokrejs@×××××××××××××××.cz</email> |
| 77 |
+ <name>Martin Mokrejs</name> |
| 78 |
+ </maintainer> |
| 79 |
+</pkgmetadata> |
Archives