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| From: | "Andrey Kislyuk (weaver)" <weaver@g.o> |
|---|---|
| To: | gentoo-commits@l.g.o |
| Subject: | [gentoo-commits] gentoo-x86 commit in sci-biology/shrimp: ChangeLog shrimp-1.3.0.ebuild |
| Date: | Thu, 29 Oct 2009 01:47:58 |
| Message-Id: | E1N3K7H-0003hM-L1@stork.gentoo.org |
| 1 | weaver 09/10/29 01:47:55 |
| 2 | |
| 3 | Modified: ChangeLog |
| 4 | Added: shrimp-1.3.0.ebuild |
| 5 | Log: |
| 6 | Version bump |
| 7 | (Portage version: 2.2_rc30/cvs/Linux x86_64) |
| 8 | |
| 9 | Revision Changes Path |
| 10 | 1.5 sci-biology/shrimp/ChangeLog |
| 11 | |
| 12 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/shrimp/ChangeLog?rev=1.5&view=markup |
| 13 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/shrimp/ChangeLog?rev=1.5&content-type=text/plain |
| 14 | diff : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/shrimp/ChangeLog?r1=1.4&r2=1.5 |
| 15 | |
| 16 | Index: ChangeLog |
| 17 | =================================================================== |
| 18 | RCS file: /var/cvsroot/gentoo-x86/sci-biology/shrimp/ChangeLog,v |
| 19 | retrieving revision 1.4 |
| 20 | retrieving revision 1.5 |
| 21 | diff -u -r1.4 -r1.5 |
| 22 | --- ChangeLog 22 Sep 2009 14:08:40 -0000 1.4 |
| 23 | +++ ChangeLog 29 Oct 2009 01:47:54 -0000 1.5 |
| 24 | @@ -1,6 +1,11 @@ |
| 25 | # ChangeLog for sci-biology/shrimp |
| 26 | # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 |
| 27 | -# $Header: /var/cvsroot/gentoo-x86/sci-biology/shrimp/ChangeLog,v 1.4 2009/09/22 14:08:40 maekke Exp $ |
| 28 | +# $Header: /var/cvsroot/gentoo-x86/sci-biology/shrimp/ChangeLog,v 1.5 2009/10/29 01:47:54 weaver Exp $ |
| 29 | + |
| 30 | +*shrimp-1.3.0 (28 Oct 2009) |
| 31 | + |
| 32 | + 28 Oct 2009; Andrey Kislyuk <weaver@g.o> +shrimp-1.3.0.ebuild: |
| 33 | + Version bump |
| 34 | |
| 35 | 22 Sep 2009; Markus Meier <maekke@g.o> shrimp-1.2.1.ebuild: |
| 36 | x86 stable, bug #283679 |
| 37 | |
| 38 | |
| 39 | |
| 40 | 1.1 sci-biology/shrimp/shrimp-1.3.0.ebuild |
| 41 | |
| 42 | file : http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/shrimp/shrimp-1.3.0.ebuild?rev=1.1&view=markup |
| 43 | plain: http://sources.gentoo.org/viewcvs.py/gentoo-x86/sci-biology/shrimp/shrimp-1.3.0.ebuild?rev=1.1&content-type=text/plain |
| 44 | |
| 45 | Index: shrimp-1.3.0.ebuild |
| 46 | =================================================================== |
| 47 | # Copyright 1999-2009 Gentoo Foundation |
| 48 | # Distributed under the terms of the GNU General Public License v2 |
| 49 | # $Header: /var/cvsroot/gentoo-x86/sci-biology/shrimp/shrimp-1.3.0.ebuild,v 1.1 2009/10/29 01:47:54 weaver Exp $ |
| 50 | |
| 51 | EAPI="2" |
| 52 | |
| 53 | MY_PV=${PV//./_} |
| 54 | |
| 55 | DESCRIPTION="SHort Read Mapping Package" |
| 56 | HOMEPAGE="http://compbio.cs.toronto.edu/shrimp/" |
| 57 | SRC_URI="http://compbio.cs.toronto.edu/shrimp/releases/SHRiMP_${MY_PV}.src.tar.gz" |
| 58 | |
| 59 | LICENSE="as-is" |
| 60 | SLOT="0" |
| 61 | IUSE="" |
| 62 | KEYWORDS="~amd64 ~x86" |
| 63 | |
| 64 | DEPEND="" |
| 65 | RDEPEND="" |
| 66 | |
| 67 | S="${WORKDIR}/SHRiMP_${MY_PV}" |
| 68 | |
| 69 | src_configure() { |
| 70 | sed -i -e '1 a CXXFLAGS+= -O3 -mmmx -msse -msse2' \ |
| 71 | -e 's/-static//' "${S}/Makefile" || die |
| 72 | } |
| 73 | |
| 74 | src_install() { |
| 75 | rm bin/README |
| 76 | dobin bin/* || die |
| 77 | insinto /usr/share/${PN} |
| 78 | doins -r utils || die |
| 79 | dodoc HISTORY README TODO |
| 80 | } |