[gentoo-commits] repo/gentoo:master commit in: sys-cluster/openmpi/

[Sam James]

commit:     f6e611531d183fae2e185d8427ce058c95cbf628
Author:     Sam James <sam <AT> gentoo <DOT> org>
AuthorDate: Sat Jun  4 00:28:08 2022 +0000
Commit:     Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Sat Jun  4 01:16:55 2022 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f6e61153

sys-cluster/openmpi: add 4.1.4

Signed-off-by: Sam James <sam <AT> gentoo.org>

 sys-cluster/openmpi/Manifest             |   1 +
 sys-cluster/openmpi/openmpi-4.1.4.ebuild | 186 +++++++++++++++++++++++++++++++
 2 files changed, 187 insertions(+)

diff --git a/sys-cluster/openmpi/Manifest b/sys-cluster/openmpi/Manifest
index 42c7707e372a..204d9ee2be6f 100644
--- a/sys-cluster/openmpi/Manifest
+++ b/sys-cluster/openmpi/Manifest
@@ -1 +1,2 @@
 DIST openmpi-4.1.2.tar.bz2 10084596 BLAKE2B 2e6fc12b4564a302d2c364528d0f6bea8b23f9b1cd6059763b8d5de583d86aae2812c239b1d0bb40c83f3c7682c8e666ce1de3112e95de54848169cb5e2805e8 SHA512 1958f96434cddbe525b4511fcf8d0cf8bf1ff376e024466219bd3a2092900e318f45a4b1e1a8ef6b03e350f46a71777fc7db82a7df711f12bb9758150d209aad
+DIST openmpi-4.1.4.tar.bz2 10042839 BLAKE2B b020e3530ae5dde7b144e7c33b1a3f26f622526a4b48a97a0956fc6f49bbf9dfd5be9ebeeaf3bdc5168a307507408ba5dd8e2a537148821e1d476678177dc5d6 SHA512 c70a92c9b16b8c76a871183f9b180d60861186e64140da897d206d53bc06213f31ea93b31734645f580f4bf28dda5605d85dbce2417e4596955384d961bed653

diff --git a/sys-cluster/openmpi/openmpi-4.1.4.ebuild b/sys-cluster/openmpi/openmpi-4.1.4.ebuild
new file mode 100644
index 000000000000..35d6f2a025ad
--- /dev/null
+++ b/sys-cluster/openmpi/openmpi-4.1.4.ebuild
@@ -0,0 +1,186 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+FORTRAN_NEEDED=fortran
+
+inherit cuda fortran-2 java-pkg-opt-2 multilib-minimal
+
+MY_P=${P/-mpi}
+S=${WORKDIR}/${MY_P}
+
+IUSE_OPENMPI_FABRICS="
+	openmpi_fabrics_ofed
+	openmpi_fabrics_knem"
+
+IUSE_OPENMPI_RM="
+	openmpi_rm_pbs
+	openmpi_rm_slurm"
+
+IUSE_OPENMPI_OFED_FEATURES="
+	openmpi_ofed_features_control-hdr-padding
+	openmpi_ofed_features_udcm
+	openmpi_ofed_features_rdmacm
+	openmpi_ofed_features_dynamic-sl"
+
+DESCRIPTION="A high-performance message passing library (MPI)"
+HOMEPAGE="https://www.open-mpi.org"
+SRC_URI="https://www.open-mpi.org/software/ompi/v$(ver_cut 1-2)/downloads/${MY_P}.tar.bz2"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~alpha ~amd64 ~arm ~arm64 ~ia64 ~ppc ~ppc64 ~riscv ~sparc ~x86 ~amd64-linux"
+IUSE="cma cuda cxx fortran ipv6 java libompitrace peruse romio
+	${IUSE_OPENMPI_FABRICS} ${IUSE_OPENMPI_RM} ${IUSE_OPENMPI_OFED_FEATURES}"
+
+REQUIRED_USE="
+	openmpi_rm_slurm? ( !openmpi_rm_pbs )
+	openmpi_rm_pbs? ( !openmpi_rm_slurm )
+	openmpi_ofed_features_control-hdr-padding? ( openmpi_fabrics_ofed )
+	openmpi_ofed_features_udcm? ( openmpi_fabrics_ofed )
+	openmpi_ofed_features_rdmacm? ( openmpi_fabrics_ofed )
+	openmpi_ofed_features_dynamic-sl? ( openmpi_fabrics_ofed )"
+
+CDEPEND="
+	!sys-cluster/mpich
+	!sys-cluster/mpich2
+	!sys-cluster/nullmpi
+	>=dev-libs/libevent-2.0.22:=[${MULTILIB_USEDEP},threads]
+	dev-libs/libltdl:0[${MULTILIB_USEDEP}]
+	>=sys-apps/hwloc-2.0.2:=[${MULTILIB_USEDEP}]
+	>=sys-libs/zlib-1.2.8-r1[${MULTILIB_USEDEP}]
+	cuda? ( >=dev-util/nvidia-cuda-toolkit-6.5.19-r1:= )
+	openmpi_fabrics_ofed? ( sys-cluster/rdma-core )
+	openmpi_fabrics_knem? ( sys-cluster/knem )
+	openmpi_rm_pbs? ( sys-cluster/torque )
+	openmpi_rm_slurm? ( sys-cluster/slurm )
+	openmpi_ofed_features_rdmacm? ( sys-cluster/rdma-core )"
+
+RDEPEND="${CDEPEND}
+	java? ( >=virtual/jre-1.8:* )"
+
+DEPEND="${CDEPEND}
+	java? ( >=virtual/jdk-1.8:* )"
+
+MULTILIB_WRAPPED_HEADERS=(
+	/usr/include/mpi.h
+	/usr/include/openmpi/ompi/mpi/java/mpiJava.h
+	/usr/include/openmpi/mpiext/mpiext_cuda_c.h
+)
+
+pkg_setup() {
+	fortran-2_pkg_setup
+	java-pkg-opt-2_pkg_setup
+
+	elog
+	elog "OpenMPI has an overwhelming count of configuration options."
+	elog "Don't forget the EXTRA_ECONF environment variable can let you"
+	elog "specify configure options if you find them necessary."
+	elog
+}
+
+src_prepare() {
+	default
+
+	# Avoid test which ends up looking at system mounts
+	echo "int main() { return 0; }" > test/util/opal_path_nfs.c || die
+
+	# Necessary for scalibility, see
+	# http://www.open-mpi.org/community/lists/users/2008/09/6514.php
+	echo 'oob_tcp_listen_mode = listen_thread' \
+		>> opal/etc/openmpi-mca-params.conf || die
+}
+
+multilib_src_configure() {
+	if use java; then
+		# We must always build with the right -source and -target
+		# flags. Passing flags to javac isn't explicitly supported here
+		# but we can cheat by overriding the configure test for javac.
+		export ac_cv_path_JAVAC="$(java-pkg_get-javac) $(java-pkg_javac-args)"
+	fi
+
+	local myconf=(
+		# configure takes a looooong time, but upstream currently force
+		# constriants on caching:
+		# https://github.com/open-mpi/ompi/blob/9eec56222a5c98d13790c9ee74877f1562ac27e8/config/opal_config_subdir.m4#L118
+		# so no --cache-dir for now.
+		--enable-mpi-fortran=$(usex fortran all no)
+		--enable-orterun-prefix-by-default
+		--enable-pretty-print-stacktrace
+
+		--sysconfdir="${EPREFIX}/etc/${PN}"
+
+		--with-hwloc="${EPREFIX}/usr"
+		--with-hwloc-libdir="${EPREFIX}/usr/$(get_libdir)"
+		--with-libltdl="${EPREFIX}/usr"
+		--with-libevent="${EPREFIX}/usr"
+		--with-libevent-libdir="${EPREFIX}/usr/$(get_libdir)"
+
+		# Re-enable for 5.0!
+		# See https://github.com/open-mpi/ompi/issues/9697#issuecomment-1003746357
+		# and https://bugs.gentoo.org/828123#c14
+		--disable-heterogeneous
+
+		$(use_enable cxx mpi-cxx)
+		$(use_enable ipv6)
+		$(use_enable libompitrace)
+		$(use_enable peruse)
+		$(use_enable romio io-romio)
+
+		$(use_with cma)
+
+		$(multilib_native_use_enable java mpi-java)
+		$(multilib_native_use_enable openmpi_ofed_features_control-hdr-padding openib-control-hdr-padding)
+		$(multilib_native_use_enable openmpi_ofed_features_rdmacm openib-rdmacm)
+		$(multilib_native_use_enable openmpi_ofed_features_udcm openib-udcm)
+		$(multilib_native_use_enable openmpi_ofed_features_dynamic-sl openib-dynamic-sl)
+
+		$(multilib_native_use_with cuda cuda "${EPREFIX}"/opt/cuda)
+		$(multilib_native_use_with openmpi_fabrics_ofed verbs "${EPREFIX}"/usr)
+		$(multilib_native_use_with openmpi_fabrics_knem knem "${EPREFIX}"/usr)
+		$(multilib_native_use_with openmpi_rm_pbs tm)
+		$(multilib_native_use_with openmpi_rm_slurm slurm)
+	)
+
+	CONFIG_SHELL="${BROOT}"/bin/bash ECONF_SOURCE="${S}" econf "${myconf[@]}"
+}
+
+multilib_src_compile() {
+	emake V=1
+}
+
+multilib_src_install() {
+	default
+
+	# fortran header cannot be wrapped (bug #540508), workaround part 1
+	if multilib_is_native_abi && use fortran; then
+		mkdir "${T}"/fortran || die
+		mv "${ED}"/usr/include/mpif* "${T}"/fortran || die
+	else
+		# some fortran files get installed unconditionally
+		rm \
+			"${ED}"/usr/include/mpif* \
+			"${ED}"/usr/bin/mpif* \
+			|| die
+	fi
+}
+
+multilib_src_install_all() {
+	# fortran header cannot be wrapped (bug #540508), workaround part 2
+	if use fortran; then
+		mv "${T}"/fortran/mpif* "${ED}"/usr/include || die
+	fi
+
+	# Remove la files, no static libs are installed and we have pkg-config
+	find "${ED}" -name '*.la' -delete || die
+
+	if use java; then
+		local mpi_jar="${ED}"/usr/$(get_libdir)/mpi.jar
+		java-pkg_dojar "${mpi_jar}"
+		# We don't want to install the jar file twice
+		# so let's clean after ourselves.
+		rm "${mpi_jar}" || die
+	fi
+	einstalldocs
+}