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commit: 2d2c3a2f74c6633b68cdfad591123bdc24d10935 |
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Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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AuthorDate: Mon Mar 24 00:33:10 2014 +0000 |
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Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> |
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CommitDate: Mon Mar 24 00:33:10 2014 +0000 |
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URL: http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=2d2c3a2f |
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|
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sci-biology/sickle: new package |
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|
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--- |
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sci-biology/sickle/ChangeLog | 11 +++++++++++ |
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sci-biology/sickle/metadata.xml | 9 +++++++++ |
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sci-biology/sickle/sickle-9999.ebuild | 25 +++++++++++++++++++++++++ |
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3 files changed, 45 insertions(+) |
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|
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diff --git a/sci-biology/sickle/ChangeLog b/sci-biology/sickle/ChangeLog |
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new file mode 100644 |
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index 0000000..bdbc7e7 |
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--- /dev/null |
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+++ b/sci-biology/sickle/ChangeLog |
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@@ -0,0 +1,11 @@ |
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+# ChangeLog for sci-biology/sickle |
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+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 |
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+# $Header: $ |
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+ |
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+*sickle-9999 (24 Mar 2014) |
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+ |
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+ 24 Mar 2014; Martin Mokrejs <mmokrejs@×××××××××××××××.cz> |
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+ +sickle-9999.ebuild, +metadata.xml: |
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+ simple ebuild, bundled Makefile forces compile flags, program version, but |
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+ works |
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+ |
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|
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diff --git a/sci-biology/sickle/metadata.xml b/sci-biology/sickle/metadata.xml |
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new file mode 100644 |
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index 0000000..2bc8930 |
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--- /dev/null |
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+++ b/sci-biology/sickle/metadata.xml |
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@@ -0,0 +1,9 @@ |
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+<?xml version="1.0" encoding="UTF-8"?> |
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+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> |
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+<pkgmetadata> |
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+ <herd>sci-biology</herd> |
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+ <maintainer> |
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+ <email>mmokrejs@×××××××××××××××.cz</email> |
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+ <name>Martin Mokrejs</name> |
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+ </maintainer> |
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+</pkgmetadata> |
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|
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diff --git a/sci-biology/sickle/sickle-9999.ebuild b/sci-biology/sickle/sickle-9999.ebuild |
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new file mode 100644 |
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index 0000000..46f0e91 |
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--- /dev/null |
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+++ b/sci-biology/sickle/sickle-9999.ebuild |
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@@ -0,0 +1,25 @@ |
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+# Copyright 1999-2014 Gentoo Foundation |
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+# Distributed under the terms of the GNU General Public License v2 |
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+# $Header: $ |
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+ |
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+EAPI=5 |
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+ |
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+inherit eutils git-r3 |
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+ |
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+DESCRIPTION="Windowed adaptive adaptor trimming tool for FASTQ data from Illumina/Solexa" |
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+HOMEPAGE="https://github.com/najoshi/sickle" |
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+EGIT_REPO_URI="https://github.com/najoshi/sickle" |
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+ |
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+LICENSE="sickle" |
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+SLOT="0" |
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+KEYWORDS="~amd64" |
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+IUSE="" |
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+ |
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+DEPEND="" |
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+RDEPEND="${DEPEND} |
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+ sys-libs/zlib" |
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+ |
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+src_install(){ |
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+ dobin sickle |
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+ dodoc README.md |
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+} |