Gentoo Archives: gentoo-commits

From: Andreas Sturmlechner <asturm@g.o>
To: gentoo-commits@l.g.o
Subject: [gentoo-commits] repo/gentoo:master commit in: sci-chemistry/openbabel/files/, sci-chemistry/openbabel/
Date: Sun, 14 Oct 2018 19:41:09
Message-Id: 1539545599.5257caeccd710e6c1d27f86ebd808f14f98a120b.asturm@gentoo
1 commit: 5257caeccd710e6c1d27f86ebd808f14f98a120b
2 Author: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
3 AuthorDate: Sun Oct 14 19:33:19 2018 +0000
4 Commit: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org>
5 CommitDate: Sun Oct 14 19:33:19 2018 +0000
6 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5257caec
7
8 sci-chemistry/openbabel: Drop 2.3.2-r1
9
10 Signed-off-by: Andreas Sturmlechner <asturm <AT> gentoo.org>
11 Package-Manager: Portage-2.3.51, Repoman-2.3.11
12
13 sci-chemistry/openbabel/Manifest | 1 -
14 .../files/openbabel-2.3.2-test_lib_path.patch | 27 -------
15 sci-chemistry/openbabel/openbabel-2.3.2-r1.ebuild | 92 ----------------------
16 3 files changed, 120 deletions(-)
17
18 diff --git a/sci-chemistry/openbabel/Manifest b/sci-chemistry/openbabel/Manifest
19 index b44e078a63a..ac268758e8c 100644
20 --- a/sci-chemistry/openbabel/Manifest
21 +++ b/sci-chemistry/openbabel/Manifest
22 @@ -1,2 +1 @@
23 -DIST openbabel-2.3.2.tar.gz 20509105 BLAKE2B d475c2da0d7171650eeb4b78a948421b783bdbb9342c81114d3dbc19d5cbb273f7303438920ffaeef5b6332e4b72606a86ded5cbd3d7e541f62b59b46483bb69 SHA512 d0e1f8b758ffdd65ec6c31d988bffe3279355e286ce69fad12c5905b3b832e2b73ee95b1061b1576aba1ee9fe4da5e31ec30350c473be17493c657dc80caf919
24 DIST openbabel-2.4.1.tar.gz 11618304 BLAKE2B 8fc051e83add9be6456e281a109bd6bbec282a64ffc83309819f0decbf167b4914fbb7f1966e95e103f268754045b804317f51c79a952ace707c6af2bd320125 SHA512 427e678f0a911bd27b9a8a05e60b6e09f113be4e5dd180daaf80c28d06368e52b57501261755ab3817a8d31f2754db24471fd0ceee706d029386d6f70800e9c6
25
26 diff --git a/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch b/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch
27 deleted file mode 100644
28 index 66a796d17b7..00000000000
29 --- a/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch
30 +++ /dev/null
31 @@ -1,27 +0,0 @@
32 -diff -ru old/openbabel-2.3.0/test/CMakeLists.txt new/openbabel-2.3.0/test/CMakeLists.txt
33 ---- a/test/CMakeLists.txt 2010-10-26 17:39:01.000000000 +0300
34 -+++ b/test/CMakeLists.txt 2010-11-14 18:13:32.000000000 +0200
35 -@@ -2,7 +2,7 @@
36 - add_definitions(-DTESTDATADIR="\\"${CMAKE_SOURCE_DIR}/test/files/\\"")
37 -
38 - # define FORMATDIR for location of format plugin binaries
39 --add_definitions(-DFORMATDIR="\\"${openbabel_BINARY_DIR}/lib/\\"")
40 -+add_definitions(-DFORMATDIR="\\"${openbabel_BINARY_DIR}/lib${LIB_SUFFIX}/\\"")
41 -
42 - ###########################################################
43 - # new tests using obtest.h
44 -@@ -32,12 +35,12 @@ set(tests
45 - uniqueid
46 - )
47 -
48 --if (EIGEN2_FOUND)
49 -+if(EIGEN2_FOUND OR EIGEN3_FOUND)
50 - set(tests
51 - align
52 - ${tests}
53 - )
54 --endif (EIGEN2_FOUND)
55 -+endif()
56 -
57 - set(TEST_PATH ${CMAKE_RUNTIME_OUTPUT_DIRECTORY})
58 -
59
60 diff --git a/sci-chemistry/openbabel/openbabel-2.3.2-r1.ebuild b/sci-chemistry/openbabel/openbabel-2.3.2-r1.ebuild
61 deleted file mode 100644
62 index 9665a2ffebc..00000000000
63 --- a/sci-chemistry/openbabel/openbabel-2.3.2-r1.ebuild
64 +++ /dev/null
65 @@ -1,92 +0,0 @@
66 -# Copyright 1999-2017 Gentoo Foundation
67 -# Distributed under the terms of the GNU General Public License v2
68 -
69 -EAPI=5
70 -
71 -WX_GTK_VER="3.0"
72 -
73 -inherit cmake-utils eutils wxwidgets
74 -
75 -DESCRIPTION="Interconverts file formats used in molecular modeling"
76 -HOMEPAGE="http://openbabel.sourceforge.net/"
77 -SRC_URI="mirror://sourceforge/openbabel/${P}.tar.gz"
78 -
79 -SLOT="0"
80 -LICENSE="GPL-2"
81 -KEYWORDS="amd64 ~arm x86 ~amd64-linux ~x86-linux ~ppc-macos"
82 -IUSE="doc openmp test wxwidgets"
83 -
84 -RDEPEND="
85 - dev-cpp/eigen:3
86 - dev-libs/libxml2:2
87 - sci-libs/inchi
88 - sys-libs/zlib
89 - wxwidgets? ( x11-libs/wxGTK:${WX_GTK_VER}[X] )"
90 -DEPEND="${RDEPEND}
91 - >=dev-util/cmake-2.4.8
92 - doc? ( app-doc/doxygen )"
93 -
94 -DOCS="AUTHORS ChangeLog NEWS README THANKS doc/*.inc doc/README* doc/*.mol2"
95 -
96 -PATCHES=(
97 - "${FILESDIR}"/${P}-test_lib_path.patch
98 - "${FILESDIR}"/${P}-gcc-6_and_7-backport.patch
99 - )
100 -
101 -pkg_setup() {
102 - if use openmp; then
103 - if [[ $(tc-getCC) == *gcc ]] && ! tc-has-openmp; then
104 - ewarn "OpenMP is not available in your current selected gcc"
105 - die "need openmp capable gcc"
106 - fi
107 - FORTRAN_NEED_OPENMP=1
108 - fi
109 -}
110 -
111 -src_prepare() {
112 - sed \
113 - -e '/__GNUC__/s:== 4:>= 4:g' \
114 - -i include/openbabel/shared_ptr.h || die
115 - cmake-utils_src_prepare
116 -}
117 -
118 -src_configure() {
119 - use wxwidgets && need-wxwidgets unicode
120 - local mycmakeargs=()
121 - mycmakeargs+=(
122 - -DOPENBABEL_USE_SYSTEM_INCHI=ON
123 - $(cmake-utils_use_enable openmp OPENMP)
124 - $(cmake-utils_use wxwidgets BUILD_GUI)
125 - )
126 -
127 - cmake-utils_src_configure
128 -}
129 -
130 -src_install() {
131 - dohtml doc/{*.html,*.png}
132 - if use doc ; then
133 - insinto /usr/share/doc/${PF}/API/html
134 - doins doc/API/html/*
135 - fi
136 -
137 - cmake-utils_src_install
138 -}
139 -
140 -src_test() {
141 - local mycmakeargs=""
142 - mycmakeargs="${mycmakeargs}
143 - -DOPENBABEL_USE_SYSTEM_INCHI=ON
144 - -DPYTHON_EXECUTABLE=false
145 - $(cmake-utils_use_enable openmp OPENMP)
146 - $(cmake-utils_use wxwidgets BUILD_GUI)
147 - $(cmake-utils_use_enable test TESTS)"
148 -
149 - cmake-utils_src_configure
150 - cmake-utils_src_compile
151 - cmake-utils_src_test -E py
152 -}
153 -
154 -pkg_postinst() {
155 - optfeature "perl support" sci-chemistry/openbabel-perl
156 - optfeature "python support" sci-chemistry/openbabel-python
157 -}