[gentoo-commits] gentoo-x86 commit in sci-biology/rebase: rebase-1006.ebuild ChangeLog rebase-909.ebuild

[Justin Lecher (jlec)]

jlec        10/06/25 09:09:03

  Modified:             ChangeLog
  Added:                rebase-1006.ebuild
  Removed:              rebase-909.ebuild
  Log:
  Version Bump
  (Portage version: 2.2_rc67/cvs/Linux x86_64)

Revision  Changes    Path
1.94                 sci-biology/rebase/ChangeLog

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.94&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?rev=1.94&content-type=text/plain
diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/ChangeLog?r1=1.93&r2=1.94

Index: ChangeLog
===================================================================
RCS file: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v
retrieving revision 1.93
retrieving revision 1.94
diff -u -r1.93 -r1.94
--- ChangeLog	1 Jan 2010 21:41:53 -0000	1.93
+++ ChangeLog	25 Jun 2010 09:09:03 -0000	1.94
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/rebase
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.93 2010/01/01 21:41:53 fauli Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.94 2010/06/25 09:09:03 jlec Exp $
+
+*rebase-1006 (25 Jun 2010)
+
+  25 Jun 2010; Justin Lecher <jlec@g.o> -rebase-909.ebuild,
+  +rebase-1006.ebuild:
+  Version Bump
 
   01 Jan 2010; Christian Faulhammer <fauli@g.o> rebase-909.ebuild:
   Transfer Prefix keywords



1.1                  sci-biology/rebase/rebase-1006.ebuild

file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/rebase-1006.ebuild?rev=1.1&view=markup
plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/rebase/rebase-1006.ebuild?rev=1.1&content-type=text/plain

Index: rebase-1006.ebuild
===================================================================
# Copyright 1999-2010 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1006.ebuild,v 1.1 2010/06/25 09:09:03 jlec Exp $

EAPI="3"

MY_PV=${PV#1}

DESCRIPTION="A restriction enzyme database"
LICENSE="public-domain"
HOMEPAGE="http://rebase.neb.com"
SRC_URI="mirror://gentoo/${P}.tar.xz"

SLOT="0"
# Minimal build keeps only the indexed files (if applicable) and the
# documentation. The non-indexed database is not installed.
IUSE="emboss minimal"
KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"

RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
DEPEND="${RDEPEND}
	|| ( app-arch/xz-utils app-arch/lzma-utils )"

src_compile() {
	if use emboss; then
		echo; einfo "Indexing Rebase for usage with EMBOSS."
		mkdir REBASE
		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
				-protofile proto.${MY_PV} -equivalences \
				|| die "Indexing Rebase failed."
		echo
	fi
}

src_install() {
	if ! use minimal; then
		insinto /usr/share/${PN}
		doins withrefm.${MY_PV} proto.${MY_PV} || die \
				"Failed to install raw database."
	fi
	newdoc REBASE.DOC README || die "Failed to install documentation."
	if use emboss; then
		insinto /usr/share/EMBOSS/data/REBASE
		doins REBASE/embossre.{enz,ref,sup} || die \
				"Failed to install EMBOSS data files."
		insinto /usr/share/EMBOSS/data
		doins REBASE/embossre.equ \
				|| die "Failed to install enzyme prototypes file."
	fi
}